Conserved Protein Domain Family
DctQ

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pfam04290: DctQ (this model, PSSM-Id:377284 is obsolete and has been replaced by 427843)
Tripartite ATP-independent periplasmic transporters, DctQ component
The function of the members of this family is unknown, but DctQ homologs are invariably found in the tripartite ATP-independent periplasmic transporters.
Statistics
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PSSM-Id: 377284
Aligned: 91 rows
Threshold Bit Score: 45.7127
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012178153   32 IAVITVASIIGRALiglgL--------GPiTgDFELVEAGCAVAIFAFLPWCQLKRGHVTVDIFVDRL-PPRIHALTGLI 102 Dinoroseobacte...
WP_011768984   31 LAGIVAFEVFSRYI----Ln-------SPtIwVYDTSLFLFGYISALGGAYAQQRNAHINVDIIYLKV-PLYLRRVFNVI 98  Psychromonas i...
WP_011914296   43 VLLVVLANVFSRFA----Ls-------RGsIaLEELSWHLFGAALMLALAYAVVRDDHVRVDVLRERF-SLRSQAWIELL 110 Pseudomonas
Q10ZZ3         29 MVLVGFWNVIGRYLgr-tIgqnltsnaFI-----EIQWYIFDLVFLLGSAYSLKHNEHVRVDIFYTKW-SPKRKALANLI 101 Trichodesmium ...
Q4FP03         26 LMGGTCYEVMMAYV----Fnk-----pTL-W-NFDFSMQMYGAILMMSGAYCLATESHVRGDVIYRLF-KPRTQGYIDLV 93  Candidatus Pel...
Q7W0B3         56 MALSMCYEIFSRYL----Fna-----pTA-W-ATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRL-SAPVRLRVELL 123 Bordetella per...
Q6N8W9         72 VALNTFLAVFMRKF----Fs-------VTiPdYYNFGQFMLGVLIFWGIAATSYRGSHITVDLVWAAA-SPRWQRIIDIF 139 Rhodopseudomon...
USDA:Abu_0360  27 GVLLAFINVVLRYI----Fdm-----sLP-W-AAELTNYLFIWAALFGAAYGFKQGAHISITLLIEKCsPAVMKGFL-IF 94  Arcobacter but...
Q24PJ8         23 GVTVIFYGVIMRYF----Fnd-----pQP-W-VDEISQWLIIWGTLIGASVALRNNHHISVEMLYDRL-PLRGRFMVTIF 90  Desulfitobacte...
WP_011971686   26 LIGTTFMGVLMRYF----Fnn-----pYT-W-LEEFQLWCFVWLVFFGSGAAFRSGSHVSIDVVVDLM-PPIARKIVGVF 93  Alkaliphilus m...
WP_012178153  103 GDG-LIALAAG----VIFWRLWlgfgekfpygseglrealgMGFKPFFPETTYELE---LPVWIPY-AL---AVTGAAVF 170 Dinoroseobacte...
WP_011768984   99 TII-LAVGFLI----LLAKMSFek----------------fQESLKFTYRTPSEWApevYHFWLM-------MTVSAVIF 150 Psychromonas i...
WP_011914296  111 AIAlLALPVIVlmidALIPYAY--------------------KAYLYNERSQAPSG---LPYRFIFkSV---LPIGLVLV 164 Pseudomonas
Q10ZZ3        102 GTIfFLIPFSI----IIVVVSWga----------------vLNSWAIFETSPDPGG---LPRYPIK-TM---IIVSFILL 154 Trichodesmium ...
Q4FP03         94 LYF-IFFFPGVv---SLAFYGYey---------------aaLAWKIKETSWSSPAQ---INIYMVK-SL---IPAAGVFL 147 Candidatus Pel...
Q7W0B3        124 CQW-LALLFCV----VLGWQMAsf----------------nVREYLNDTRDWGLLS---TPQWMPE-LA---VSVGMVVF 175 Bordetella per...
Q6N8W9        140 ATL-VLLFVVS----VQTYTLFd-----------------kVVTTKADHIVTMDLQ---IPIWPFY-LVswiGDVSAVLL 193 Rhodopseudomon...
USDA:Abu_0360  95 ASL-LSIAYLL----LISYFGYe-----------------lVLFLMDFGEINVDLQ---VPMWIPQ-LV---IPIAFLLA 145 Arcobacter but...
Q24PJ8         91 AHM-VGLLFGI----FVLRYGFe-----------------lVAFVHKTGQKSTDTG---IFLYIVY-FI---LPLMGALL 141 Desulfitobacte...
WP_011971686   94 GYI-VVMFILA----YIMFHGSn-----------------lVKQLLDTGRYTNILK---VPYPVIY-SA---LPIGCVLM 144 Alkaliphilus m...
WP_012178153  171 LV---VAL-YTVWRS-LN 183 Dinoroseobacter shibae
WP_011768984  151 IAeysAELiENIYYLfTR 168 Psychromonas ingrahamii
WP_011914296  165 AL---ALL-SRALRCsTL 178 Pseudomonas
Q10ZZ3        155 FL---QGI-SEAIKNfAV 168 Trichodesmium erythraeum IMS101
Q4FP03        148 VI---QGI-AEVFRAiic 161 Candidatus Pelagibacter ubique HTCC1062
Q7W0B3        176 CM---SIL-VDIYRLspp 189 Bordetella pertussis
Q6N8W9        194 IA-------IRTFRLiFH 204 Rhodopseudomonas palustris
USDA:Abu_0360 146 AY---RVF-EKLIELyRT 159 Arcobacter butzleri RM4018
Q24PJ8        142 SM---RFV-VKLYETlKN 155 Desulfitobacterium hafniense Y51
WP_011971686  145 MI---NHT-IVTALLfFT 158 Alkaliphilus metalliredigens
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