Conserved Protein Domain Family
Prok-E2_D

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pfam14460: Prok-E2_D 
Prokaryotic E2 family D
A member of the E2/UBC superfamily of proteins found in several bacteria. Members of this family lack the conserved histidine of the classical E2-fold. However, they have an absolutely conserved histidine carboxyl-terminal to the conserved cysteine. Members of this family are usually present in a conserved gene neighborhood with genes encoding members of the Ub modification pathway such as the E1, Ub and JAB proteins. These neighborhoods also contain a gene encoding a rapidly diverging alpha-helical protein.
Statistics
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PSSM-Id: 433969
Aligned: 16 rows
Threshold Bit Score: 186.031
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q11ZD1          58 KNLKLLaqqaqQGLKQDFEVIPANVLV----ANDSLLAWWMPKGTQLMSFDVSmhelagksRLQGVSGNVPTPALVFAMM 133 Polaromonas s...
Q5NXB4          57 KMFDSLd----PSRSARPVFLEPNVLS----QGPGWLVWWMKPQTRRVWFESK--------EIKLETAEVPHPGLVFAVT 120 Aromatoleum a...
jgi:Galf_0968   62 KMMQTLv----PEDCAPAQLLGDHILA----KGSDHLAWYCKPQKRQVWFKNDe-------LGQDVSATTDHPGLVFIIG 126
Q8XYU7          60 EFVEAA-----QTATAYRGFIEPHVLY----LAPNTVAWWRPAAPRTVWFSAEk-------PIGTRHGVTAHPPLVFIVH 123 Ralstonia sol...
Q7WX34          57 ALIHAVre-vaEASLPNGEFLTPNVLS----ISPTAVTWWCPAAQRRVFFDCK--------EFGKRSAVVPHPALVFQAS 123 Cupriavidus n...
CAS:Atc_2126    63 ELMGSQ----------NLFYLEERVLA----YNGSTFIVWLPPKPRKVYFDAPe-------PMGKREGITPHPGLVFAIY 121
jgi:Cylst_6375  57 FISPAAlreafVAEPIDSGYLPPNTVRwgrcYKGEWLVQFYPPQSCCISLENT-------------TLTVPMPGLVFAGC 123
WP_025279169    58 DLVRNYs---eVHDSTPCGILPSNLLYcdtrKGSERYVWYNPPQRRMMYFVES---------LKIENAEYNVPGVIYESK 125 Barnesiella
Q8A4F1          59 SLVESYt---eSMSGIPHGRIPGNMLLcdsrKGRERYIWYNPPQKRKMYFQDG---------LHITDGTFNVPGVIYVVE 126 Bacteroides t...
WP_011965215    59 SLVESYt---dDRRNVPHGKIPANMLWcdtrKGHERYIWYNPPGKRRMFFAGS---------LNIPDGTFHVPGVIYKVS 126 Bacteroidales
Q11ZD1         134 RNRnaggafegLYVFALEKSERPTSDTSLYRAPLLNVG-EDGSVCWGDG--VKPAGKTVKD-ISAWQALFFSSVFTHYN- 208 Polaromonas s...
Q5NXB4         121 QEE--------WRVFAVQGRSRPRPGTKLYQAPYWNVW-KGGRICAGSA--RLPSAGLQAD-PSGWEESFFSSRFSHPNi 188 Aromatoleum a...
jgi:Galf_0968  127 KGH--------WYVFAVKGNERPTSGTPLFVSPYLNVW-KGGHICTGNI--ETPKGAMKFS-TEAWEEAFFRSYFTHPNq 194
Q8XYU7         124 ERQ--------WYVFALAKNERPAPNTPLHVAPYFNVW-ERGEICTGNV--SLPDRPAPDA-LKAYETAFFDSRFTHPNh 191 Ralstonia sol...
Q7WX34         124 QSG--------FRVFALRGDERPVPASELCEPPYFNTW-DHGKICIGSA--HVPKQIDVAS-IAGWEAGFFNSAFTHPNh 191 Cupriavidus n...
CAS:Atc_2126   122 PGSd-------VRIFAVKGPQRPTPETKLYLAPYLNIYgDNGSICMGNV--QAPDPSPDS--IDAWESAFFNSYFTHANy 190
jgi:Cylst_6375 124 DRK--------YWIWAVKK---FDLNSPIFHAPLPNIM-ENGSICFGGN--SVPNCSAAHI-MQVWQ-LFWHSPFNQD-- 185
WP_025279169   126 EGGg-------MNVYAFKG-EVPTPETKLYAAPFFNV--TSASVCMGNPkiESPRQPTFGTfLEYLEKRFWLTEFSH--- 192 Barnesiella
Q8A4F1         127 REC--------MDIHAFKG-AIPEERTELYLAPFFNV--AGANVCLGSSspKKPQDMDFLEfQEYWEKRFWMSEFSH--- 192 Bacteroides t...
WP_011965215   127 GDR--------LDIFSYKG-EKPAENSPLFLAPFFNV--TGSSVCLGNAalTPPEDMTFSKlLEYWEKRFWLSEFSH--- 192 Bacteroidales
Q11ZD1         209 -----GTVPIVGDdpYAFIADLMETEA---KEFPAAALKPM 241 Polaromonas sp. JS666
Q5NXB4         189 hekdaLVKYKGGS--AKFWNAMLSGKF---KSFPQEVLVPA 224 Aromatoleum aromaticum EbN1
jgi:Galf_0968  195 hekgaLTKYRGGI--FALWRALMKG-----RAFPTKSLVSS 228
Q8XYU7         192 a---rITRHKDGG--GALWAHLLDHPEi--TEFPATALLPR 225 Ralstonia solanacearum
Q7WX34         192 g--skRVTYERGA--YAFWKDMLDGQF---PDYPKQVLVPM 225 Cupriavidus necator
CAS:Atc_2126   191 g---iRTSYPGGI--YSLWNDLLDGMH---TTFPEQVLVsp 223
jgi:Cylst_6375 186 -----LVQGKSKSyrENVRSHLQQLHNsnaKKYPTRDLVPW 221
WP_025279169   193 ---------LGGGrnPTKSNLVLVTKAardKPFNLNELIPL 224 Barnesiella
Q8A4F1         193 ---------LGGNrnPTRSNLVSVTEHarnNPFDYSELQQS 224 Bacteroides thetaiotaomicron
WP_011965215   193 ---------LGGSrnPTGSNLVSVTEKaraNPFDENELKPM 224 Bacteroidales
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