Conserved Protein Domain Family
BMS1

?
COG5192: BMS1 
GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Statistics
?
PSSM-Id: 227519
Aligned: 3 rows
Threshold Bit Score: 1071.67
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6325039     1 MEQSN---KQHR--KAKEKNTAKKKLHTQGHNAKAFAVAAPGKMARTMQRSSDVNERKLHVPMVDRTPEDDPPPFIVAVV 75   baker's yeast
19074292    1 ------------------------MDGKVG--AKKSNRAAIGQLLH--------EEKIARVPIENMFYKDLPPPFIS-IV 45   Encephalitozoon c...
19111894    1 MDEKKghyAKHSgpKAEKKKLKKVSDGSASNNPKAFAVASAGRMARQAMRTADISQKKLHVPMVDRTPDEAPPPVIVAVM 80   fission yeast
6325039    76 GPPGTGKTTLIRSLVRRMTKSTLNDIQGPITVVSGKHRRLTFLECPaDDLNAMIDIAKIADLVLLLIDGNFGFEMETMEF 155  baker's yeast
19074292   46 GPSGCGKSTLMRSMVKYFTHQLIDEPRGPVTLSSSKTRRITLFESR-SDIHQFVDVSKISDLVILTINGACGLEMETFEF 124  Encephalitozoon c...
19111894   81 GPPGTGKSTLIKSLVRRYSKYTISQITGPITVVAGKKRRITFLECP-NDLSSMIDVAKIADLVLLLIDANFGFEMETMEF 159  fission yeast
6325039   156 LNIAQHHGMPRVLGVATHLDLFKSQSTLRASKKRLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLSRFISVMKFRPL 235  baker's yeast
19074292  125 LTLLISHGLPKVLCVVTNVDGRSNPKYLKSIKK----RIWEEICPGIKFFHVGKVELGRYTDPDLGKLCRAVGVMKYRPI 200  Encephalitozoon c...
19111894  160 LNILAPHGMPRIMGVLTHLDLFKKTSTLREAKKRLKHRFWTELYQGAKLFYLSGVLNGRYPDREILNLSRFISVMKFRPL 239  fission yeast
6325039   236 KWRNEHPYMLADRFTDLTHPELIEtQGLQIDRKVAIYGYLHGTPLPSAPGTrVHIAGVGDFSVAQIEKLPDPCPtPFyqq 315  baker's yeast
19074292  201 EWKCMHPHVIVDRVDD------AF-----------VYGYVRG-GLIRKDME-IHIPGIGDNRMADVEVLIDPVP------ 255  Encephalitozoon c...
19111894  240 RWRNQHPYLLADRMEDLTLPVDIE-QNPKVGRKITLYGYLHGTNLPKHDAS-VHIPGVGDFVTSDVSSLEDPCP-PP--- 313  fission yeast
6325039   316 klddferekmkeeakangeitTASTTRRRkRLDDKDKLIYAPMSDVGGVLMDKDAVYIDIGKKNeePSFVPGQERGEGEK 395  baker's yeast
19074292  256 ----------------------S-HGENR--LSLRSKILYSPMSGIGGIKK-KD--------------------AGEENK 289  Encephalitozoon c...
19111894  314 ---------------------DADKVRRR-RLSEKQKLIYGPMADIGGILFDKDRVYIEVPTSN--FSKDENSEAGFGER 369  fission yeast
6325039   396 LMTGLQSVEQSIAekFDG-VGLQLFSNgTELHEVADHEGMDVESgeesieddegksKGRTSLRKPriYGKPVQEEDADID 474  baker's yeast
19074292  290 MK-----IEMDPG------VEIKIFKG-----------------------------------------GKAIAEETSR-D 316  Encephalitozoon c...
19111894  370 MVMQLQEAQQPLG--VDGnSGLQLFSN-SDAIDTVDRESSEIDN------------VGRKTRRQP--TG-LINQELIKED 431  fission yeast
6325039   475 NLPSDEEPYTNDDDVQDSEPRMVEIDFNNTGEQGAEKLAL-ETDS----EFEESEDEFSWERTAANK--LKKTESKKRTW 547  baker's yeast
19074292  317 ELS------STSD----------K-------------------DS------DESEG----------------------G- 332  Encephalitozoon c...
19111894  432 EGAFDDSDVNSADENEDVDFTGKIGAINNEDESDNEEVAFaDSDSdlggQFDDEDSNLRWKEGLASKaaLAYSQSGKRRR 511  fission yeast
6325039   548 NIGKLIYMDNISPEECIRRWRGEDDDSKDESDIEEDVDDDFFRkkdgtVTKEGNKDHAVDLEKFVPyfDTFEKLAKKWKS 627  baker's yeast
19074292  333 -------------EECIEE---------------QDEP--SLD---------------------------FEELKEMTSS 355  Encephalitozoon c...
19111894  512 NIQKIFYDESLSPKDAYAEYKGESAKSSESDLVVSDDEEDFFK-----VSKVANESISSNHEKLME--SESDRLSKKWEN 584  fission yeast
6325039   628 ---VDAIKERFLGAGILgndnktksDSNEGGEELYgdfEDLEDGNpseqAEDNSDKESEDEDENEDTNGdddNSFTNFDA 704  baker's yeast
19074292  356 ---------RFQKDATT-------------EEELI------EKFN----------------------RG----------- 374  Encephalitozoon c...
19111894  585 pqlLAQLKSRFITGSLL--------DSIEGQEEVS---QDDEEGD----FEDLEDEENSSDNEMEESSG---SSVTAENE 646  fission yeast
6325039   705 EEKKDLTMEQEREMNAAKKEKLRAQFEIEEgenfKEDDENNEYDtWYELQKAKISKQLEINNIEYQEMTPEQRQRIEGFK 784  baker's yeast
19074292  375 -------YE-EKE-----KE--KGNFLLRE--------------------KRRLEEEMK--RSE-ETMVPG--VVIP--- 411  Encephalitozoon c...
19111894  647 ESADEVDFQTEREENARKKEELRLRFEEED----RGDPEKKDVD-WYTEEKEKIARQLVINREAFEDMDPESRAEIEGYR 721  fission yeast
6325039   785 AGSYVRIVFE-KVPMEFVKNFNPKFPIVMGGLLPTEIKFGIVKARLRRHRWHKKILKTNDPLVLSLGWRRFQTLPIYTTT 863  baker's yeast
19074292  412 -GRYVKVRLSsHIPLS-IDESN---VIVLGGFLVAEKEMNIVQGKIKKYKWYKKILKTNEPAIFSVGWRRFQSIPVFSMK 486  Encephalitozoon c...
19111894  722 AGTYVRIVIN-DVPFEFVEHFDSRYPVVVGGLLPNEQRYGLVQVRIKRHRWHKKILKTNDPLIFSMGWRRFQSIPVYSIS 800  fission yeast
6325039   864 DSRTRTRMLKYTPEHTYCNAAFYGPLCSPNTPFCGVQIvansDTGNgFRIAATGIVEEIDVNIEIVKKLKLVGFPYKIFK 943  baker's yeast
19074292  487 DA-TRNRMIKYTPESMHCNVSFYGPVVPAGTGFS-VYS----EKGD-FRVLALGTITDVNGDAKLVKKLKLVGYPKQIVQ 559  Encephalitozoon c...
19111894  801 DSRTRNRMLKYTPEHMHCFGTFYGPFVAPNSGFCAVQS------------------------------------------ 838  fission yeast
6325039   944 NTAFIKDMFSSAMEVARFEGAQIKTVSGIRGEIKRALSKpEGHYRAAFEDKILMSDIVILRSWYPVRVKKFYNPVTSLLL 1023 baker's yeast
19074292  560 NTVFVRDMFTSDLEVLKFEGASLKAVSGLRGQVKGPHGK-NGEYRAVFEGKMLMSDIITLRCFVPVEVHRIFIPVDNLLG 638  Encephalitozoon c...
19111894      --------------------------------------------------------------------------------      fission yeast
6325039  1024 kektEWKGLRLTGQIRAAMNLETPSNPDSAYHKIERVERHFNGLKVPKAVQKELPFKsqihqmkpQKKKTYMAKRAVVLG 1103 baker's yeast
19074292  639 ----KWRGLRRLHEIRESLGLTHSYAPQNDSSSEEMGYGAEEDYSLPREIESKLPLD--------KRSIAVVSRRIELPV 706  Encephalitozoon c...
19111894      --------------------------------------------------------------------------------      fission yeast
6325039  1104 GDEKKARSFIQKVLTISKA-KDSKRKEQKASQRKERLKKLAKMEEEKSQRDKEKKKEYFAQNGKRttmggddesRPRKMR 1182 baker's yeast
19074292  707 PPECREKHEIKDRIVKERIrKDQEEKERMESLQRAKEEEIGKKEKEREQRIRKTIHDNYKEMAKK---------RLKKKR 777  Encephalitozoon c...
19111894      --------------------------------------------------------------------------------      fission yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap