Conserved Protein Domain Family
Tmemb_40

?
pfam10160: Tmemb_40 
Predicted membrane protein
This is a region of 280 amino acids from a group of proteins conserved from plants to humans. It is predicted to be a membrane protein but its function is otherwise unknown.
Statistics
?
PSSM-Id: 462970
Aligned: 15 rows
Threshold Bit Score: 248.795
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_020736836  34 TSRVRYWDLLLLVPNVLFFIFLLWKLPFARAKIRVTSSP-IFITFYILVFVVALVGIARAVVSMTVsTSDAATV-ADKIL 111
XP_003556491  29 ECHGFLHNAGLIIASFLFLLYLALQAKKSFLKLSHGRSY-IIISYYASLWLVSILNLLWCFSQAWE-CSPGKEF-AWNLL 105
XP_006347837  42 ECHGLWHNVLMIVPSVLFVLYLASQAKRSFSKVSNGRSH-VVAVLYAILWLVSIFNLAWCSLQAWE-CAPGKQF-MWSVI 118
F4K2U8        31 KCHGFLHNTVLVAASLFFVAYLAYEAKKSLSKLSNRRSY-IMIAYYGCLWLVSLLNLAWCCLQGWE-CTPGKEV-VWNLL 107 thale cress
XP_006837146  34 QCHGLWYNIALIIPASLFLLFLLLQARKSLKKLSHGRSY-IMIVYYALLWLVAVLNLSWCLLQSWQ-CAPGKEF-AWNLL 110
XP_018683276  44 GCHGLLYNLALIVPSVIFVAYLASLARKSFAKLTNGYSY-VMIAYYALLWLISVLNLLWCLVQAWQ-CSPEKEL-SWNML 120
Q75J22        43 GCHGTVYSLAVMLPSLAFVGFLAWQARRSFRRLSYGRSHvVVVAYYALLWAVAVLNLLWCFLQAWQ-CMPDRAF-SWNVL 120 Japanese rice
EFJ08036      59 GQHGVLYYLVMLLPVLAFTVFLIARARKCVKKLLQSQSP-IMATYYACLWIISILNILWCVLEMK----HSSST-SWNLI 132
XP_002499712  97 aSREVWFDVLVALPTVLFVMFLASHLRASVEKLRATRNH-VMATYYTNLWFVCILNLLRCGVQMWQ-ASPLNHVrLWNAL 174
EDO39501      35 GSWIRICDIVLLAPNAMFMVFLFYSLGLAHAKLVGTRCP-IVKTIYTLLLLYGIHYTL-----------------NSQAF 96 
XP_020736836 112 WEITRFFLLAIELSVVILGLafghLESKSSIKRVLAITTVLSLAYSVTQGTLEILYpdahls-aedfnIYGHGGRQF--- 187
XP_003556491 106 SLFTTSGMLFLEVSLLAFLL----QGNSTTGLEALTRTFGISGIIVGFDILLKAIY------------LFAFGIPIFins 169
XP_006347837 119 SLFTTSGMLFLEVSLIAFLL----QGNHASGREALTQTFLISAIVVGLDISLKGIY------------LFGFGIQLFdvs 182
F4K2U8       108 TLFTTSGMLFLEVSLVAFLF----QGNYASGAEALTRTFLISGFIVALDLLLKAIF------------LFGFGVPLFidn 171 thale cress
XP_006837146 111 SLFTASGMLFLEVSLVAFLL----QGNHVSGLDALMRTLIISGIIIGVDFFIKAVC------------IFGFGLPLFidv 174
XP_018683276 121 SLFTESGMLFLEVSLLAFLL----QGNHAGGLDVLTRTFVISGVIVAADTLLKAIY------------IFGFGVPLFadn 184
Q75J22       121 SLFTKSGMLFLEVSLIAFLL----QGNETSGFESLARTFVISGAVVAADVLLKTIY------------VFGFGVSLFidv 184 Japanese rice
EFJ08036     133 SLLTRFGMVLLEVSVVVFLS----QGYLTSTWDALVRTLTFSGFVAAVDALIKAIL------------IFRFGIPLFvag 196
XP_002499712 175 WLATRFGMDSLEVSAVVYLYlahgHSRAVGAAAALRETVVIAMGVAGIDLLAKSVL------------IFGFGVQVFvee 242
EDO39501      97 WLLLRCLLLSVELSVIIFGVcaanLDSRSSVRRVLLFTSASAVLFTSAQAVLEFTQdgihspyggtynLFQHGGMIF--- 173
XP_020736836 188 ---------------WLVSSCFFFLVYSLVVVLPKTPLKERisLPSRRSFYVYAGILALLNLVQGLGSALLCADII-EGL 251
XP_003556491 170 dypt----phvkwnlWVAHKLLLTLVYGFILFMYHSRWRER--LPARPAYYKYVTIMLILNAIALFACGITGNGTA-FGF 242
XP_006347837 183 nng-------sqwalWVIHKLLLTGVYGLIFFMYRSTWRER--LPARPAFQNYISIMFCVNATALLACALAAHGTG-FGI 252
F4K2U8       172 neng----ktfkwglWIIHKLLLTGVYGMVFLMYNSRWREK--LPARPAFYNYIIIMFALYSLYLVASAFTANNAH-FGF 244 thale cress
XP_006837146 175 sdtv----nhqkwglWVAHRLVLAAVYGFLLFMHHTKWRDR--LPARPAFYNYISAMFTLNAVSLLACGLIGVGAG-LGF 247
XP_018683276 185 neta----hqarwglWIVHKLLLTAVYGSIFFMHHSKWRER--LPARPAFYNYVCVMLLLNTMSLFGCLLAGNGAG-FGI 257
Q75J22       185 dqgt-----ggkwglWFLHKLVLTGVYGLIVFMYHSRWRDR--LPAKPAYYNYVCAMLLLNGISLFGCFLVATGAG-FGL 256 Japanese rice
EFJ08036     197 sdag----dwskwsfWFLHSLVFSGVYFFILVLPFTRWRDH--LPARPAFYNYVLVLFVLNMSRSLGSFILGCGSE-FGY 269
XP_002499712 243 pglhsrayfwakwgyWGARAFIAALVYGVLTALPRTRYRDW--MPARPSFYRYTGVLFVMYAVETVCALCVGGGVSrWAY 320
EDO39501     174 ---------------WFASSMLFFVMYFSLLILPCISFGRRlrLPGKPSFYRYCGFLALINILQSIGSALIYYHIT-FGT 237
XP_020736836 252 CCVDATTFLYFSFFAPLIYVAFLRGFFGSEpkilfsykcqvdeteepDMHLPQPY 306
XP_003556491 243 WLYHFTVVCYHAAYLPLLYITFLADFFQEE-----------------DLHLENVY 280
XP_006347837 253 WLYNITVICYHAMYLPLLYITFLADFLQED-----------------DLHLENVY 290
F4K2U8       245 WLYGIMSVCYHALYLPLLYITFLADFFQEE-----------------DLNLENVY 282 thale cress
XP_006837146 248 GLYNLVAICYHSLYPPLLYITFLADFFQEE-----------------DLHLEDVY 285
XP_018683276 258 WLSNLITVCYHSLYLPLLYVIFLADFFQEE-----------------DLRLENVY 295
Q75J22       257 WLYNLTSVCYHSLYLPLLYVTFLADFFQEE-----------------DMLLENVY 294 Japanese rice
EFJ08036     270 CIYSFTNYAYYAFYPPLLYLTFLADYFKEE-----------------AFQLEDVY 307
XP_002499712 321 CVFGLCNYAYYACYPPVLYLTFLADYFRED-----------------EYEVESRY 358
EDO39501     238 CILDVTVFTYFALFAPLVYVTFLAEFMSSPsqtvlq-------lkrrrdYLPNLH 285
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap