Conserved Protein Domain Family
NAM-associated

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pfam14303: NAM-associated (this model, PSSM-Id:405060 is obsolete and has been replaced by 464129)
No apical meristem-associated C-terminal domain
This domain is found in a number of different types of plant proteins including NAM-like proteins.
Statistics
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PSSM-Id: 405060
Aligned: 54 rows
Threshold Bit Score: 69.0576
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
KQK19562      176 KPFGLQHCYDLLVHDEKWRTMNYEMPTK--------KSESSSSSSPDVQNL---------DGSSNESDSEGANTSNSEQ- 237  stiff brome
4_pfamImport    1 RKFPVMHCWNILKDKPKWMDRRKEIAcqkt---snkKQKTSANSSPASLQP---------AAPADGVCDA------QPSg 62  
BAT17525       79 KKFQFMHCYNVLKNLPKWNDKRNQLAaskt---sskKQKKTANDSPAISTPacnvdenwaADPENTVGEG---------- 145  Japanese rice
5_pfamImport    1 RAFTYMECYHLLKNQPKWFDKRIEMAELeaqktpnkRQKSTTKSTAVLSTD---------VPTEGNIGDGSESTRIDAAt 71  
6_pfamImport    1 KAFTLIPCWTKLKDEDKWKARMVEIAEQemqt-snkKQKVNVDSTPTNVED---------------ANTEEEIQLSHPEe 64  
OQU84449      150 KGFSFLHCWLKIRHSQKFMPPTT-------------NKRPRRSNSPPTTDVfdleddesiKSQTPDSSMPN--------- 207  sorghum
O82618         47 RGFKFDHVWPILKGIEKFANDNMK------------TPPAFQGEGRDVTSSssfsintesSPSPGMNSIDLNMDSEDANf 114  thale cress
XP_002865041   50 KGFKFDHVWNLLKDIPKFTD-------------------NVSVGIPDTPNTesdiassptSQSPGMSSFSINLSSEDGGs 110  Arabidopsis l...
EMS57954      902 KPFTLTHYWAIINNCPKFKDQYHDFQRKr-------GKKTVALAGGGDGEA----------------------------- 945  Triticum urartu
EAY99435      282 EPFTFMHCWKLLHNEAKWNNKFLELNN---------STSPDRMEPPSTQGHtvaghaesgNENID--------------- 337  long-grained ...
KQK19562      238 --KKRPIGRKKGK----------------------------ERLKKek-vSsfkdsidlmlskrk----alaaerkeeka 282  stiff brome
4_pfamImport   63 ----RPAGKKKEK----------------------------QKLRH----Grtieavdylmer-------slrgrelkke 99  
BAT17525      146 ----RPMGRKKAK----------------------------QQMCErs-dLsrkesldylwdkk-----keadaeerkfe 187  Japanese rice
5_pfamImport   72 ntLERPVGRKKMK----------------------------EKLRQrf-dRshiesldylwakkk----eadeekeikke 118 
6_pfamImport   65 --RKKPQGVKKAK----------------------------EALKRgg-dEacmealdrmwakk-----eafdvrekkkd 108 
OQU84449      208 --GRRRMERKQAK----------------------------EKMKKgg-kQtnpaellekwltekekirddrwqenkmme 256  sorghum
O82618        115 slSSRPMGLKKAK----------------------------RKQQseeqfkqlleqnd---------------------- 144  thale cress
XP_002865041  111 nsSQRPIGSKKAK----------------------------LKRKI----Aegnnssvdtlvssn----kqildflkesa 154  Arabidopsis l...
EMS57954      946 --LKRPRGKTNSKvddirdassmalhealhgmmskkdvrdeKKRQskdeqmkqylefqr----------kkvgmkdaakk 1013 Triticum urartu
EAY99435      338 --TARPEGRDSAK----------------------------RRRSKsyaeTsssstavevlqrlq---eksektelkqdq 384  long-grained ...
KQK19562      283 reWmerkemderwiaia---krraeiaerraaiaERGAMMEERML----AIEKQKLDRQ--------------LMSTDPS 341  stiff brome
4_pfamImport  100 erCqkaftlq-----------------eewikleREKFEFKKKEA----EKAEKEEEER--------------TLGLDLN 144 
BAT17525      188 erYqiafale-----------------qkridleRDKFEFKR-----------MIKEDK--------------LLRTDTS 225  Japanese rice
5_pfamImport  119 erYnhafale-----------------eqriaaeKEKFEFKR-----------MIEEER--------------ILRTDVS 156 
6_pfamImport  109 erFlvsl------------------------eieKKRPSIEEKKA----ESELLREENE--------------IMSVNMS 146 
OQU84449      257 erKls---------------------------leERKLSLEERKVaneeKKMLWEKEQK--------------IMFCDLD 295  sorghum
O82618        145 ------------------------klikaitkgtseRNEIQRQKI----EVARMKEENK--------------ILFADLN 182  thale cress
XP_002865041  155 atReksy------------------------elaELRMQNQAKKL----ALKEMHEENK--------------ILLKDLD 192  Arabidopsis l...
EMS57954     1014 rkIdmee------------------------asrQSQLDIKAANV----TTRQRQLNIEatnaatkskevalaIMSVELT 1065 Triticum urartu
EAY99435      385 qmVeilsrkdgkikiqrdlfnlqkkhmkmsvkqhKKENEIREKQT----EAQLMSAESS--------------IMSIDIE 446  long-grained ...
KQK19562      342 KLDE-KGRAYFEFRRAQI 358  stiff brome
4_pfamImport  145 TLNY-HQQQYYEWQQKEI 161 
BAT17525      226 AMSI-EEQEYYKNVKNQI 242  Japanese rice
5_pfamImport  157 NMDI-SQQEYYKNLKDYI 173 
6_pfamImport  147 SLTP-LQKQYYETMQQKI 163 
OQU84449      296 MLEP-SQKTYVIAMRAQI 312  sorghum
O82618        183 SISDpSSRAYVENERKRI 200  thale cress
XP_002865041  193 TIADsNTREYIRSEQARI 210  Arabidopsis lyrata subsp. lyrata
EMS57954     1066 NMSE-KTRSWFEARQKEm 1082 Triticum urartu
EAY99435      447 KVPP-YLKNYYLGMQRQI 463  long-grained rice
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