3KVN,3QQ2,2QOM,3AEH,1UYN


Conserved Protein Domain Family
Autotransporter

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smart00869: Autotransporter 
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Autotransporter beta-domain
Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.
Statistics
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PSSM-Id: 214872
Aligned: 414 rows
Threshold Bit Score: 37.9342
Created: 14-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3KVN_X        359 GFVGGGGQRLDFdsQDsaaSGdgnGYNLTLGGSYrIDE---------AWRAGVAAGFYRQklEAgakD--SDYRMNSYMA 427  Pseudomonas a...
ZP_06871909   423 LLVSKENLKNKDsvIKlnqN------TKYAGYDYtFNTg---------ISLGFFAGQSTG-------------RYKNIGQ 474  Fusobacterium...
CAC14204      393 VDTLAAYQKQKGg------------HSLHVGAKVqFNPq---------WQLALVASQQKQdvQQgliN----INTQNRVL 447  Pasteurella m...
YP_001406897  555 FAYIEGYKSNIDknDIdidG-----VNVTAGVASrSDN----------ILGGVFLEYAYGdyDGkanSykSDGDINAYAL 619  Campylobacter...
NP_603291    1450 AFGARGEYKTNTagVIdykNY---AYGVAYIHENeSVKl--------GKDIGWYTGFVHNtfRFed---igKSKEEMLLG 1515 Fusobacterium...
NP_602692    1087 IFGIKGEYKTDTagVIdykNE---AYGMAYVHENeDIKl--------GKGIGWYTGIVDNtfKFkd---igKSKEEQIQA 1152 Fusobacterium...
NP_602832    1357 VFGTNGEYKTDTagVIdykNH---AYGVAYVHENeDIKl--------GRGIGWYTGIVHNtfKFkd---igKSKEHMLQA 1422 Fusobacterium...
NP_604343    2892 TFGMKGEYKTDTagVIdykYN---AYGVAYVHENeDIKl--------GKGTGWYTGIVHNtfKFkd---igNSKEKQLQA 2957 Fusobacterium...
ZP_07497409   200 NVVAKGDPRAELgnnt-----eydMLALRKTIDLsESQtmsleygiaRLDGDGAQKAGDNgvTGgysqffgLKHQMSFDN 274  Escherichia c...
ZP_03369898   385 NVVAKGDPRAELgndt-----qydMLALRQKLDLtANQnltleygiaRLDGDGSQKAGDNglTGgysqffgLKHSMAFDE 459  Salmonella en...
3KVN_X        428 SAFVQYQ-ENR----WWADAALTGGYLDYddlkrKfaLGG-GE-RSeKGDTNGHLWAFSARLGYDIaqQad--sPWHLSP 498  Pseudomonas a...
ZP_06871909   475 GIYLKKDlKP-----FYLGTVYKHTKSKDk-----------------NNDKKLHSNDFSFVVGYNK--Dis--ekTFLDG 528  Fusobacterium...
CAC14204      448 STALRYDaDN-----WWLGSVLQVNNTTLtt-drVayIGH-SahQQ-SAETEAESFSMGLFAGYEW--Kfka---lgIAL 514  Pasteurella m...
YP_001406897  620 GALARFDlPYN----LFIDSYAKIGRLNNdy-tlKgyDN------L-NVDKDSTFYSLGVFLGHNA--Yfd---sFNLEN 682  Campylobacter...
NP_603291    1516 KIGMFKSiPFDddnsLNWTVSGNVFVGRNkm-hrKflIVdeiF-NA-KS--KYYAYGIGVKNEIGK--EfrlseDFSIRP 1588 Fusobacterium...
NP_602692    1153 KVGLLKSiPFDdnnsLNWTISGDIFVGYNkm-hrKylVVneiF-NA-KS--KYYTYGIGIKNKISK--DfrlseDFSLVP 1225 Fusobacterium...
NP_602832    1423 KVGLLKSvPFDdnnsLNWTISGDIFVGRNrm-hrKylVVdeiF-NA-KA--RYYTYGIGVKNEIGK--EfrlseSFTLRP 1495 Fusobacterium...
NP_604343    2958 KVGLFKSvPFDennsLNWTISGDIFIGHNkl-erKflVVdeiF-HA-KS--KYYTYGIGIKNEIGK--EfrlseDFSIRP 3030 Fusobacterium...
ZP_07497409   275 GMNWNNAlRYDvh-nLDSSRSIAFGNTNKta-dtDv-KQQ-Yl-EF-RSEGAKTFEPSE-GLKVTP--Yag--vkLRHTL 343  Escherichia c...
ZP_03369898   460 GLAWNNSlRYDvh-nLDSSRSVAYGDVNKia-dsDa-RQQ-Ym-EF-RSEGAKTFSLMDDALKVTP--Yag--vkFRHTM 529  Salmonella en...
3KVN_X        499 FVSADYARVEVDGYSEKgaSataldyddqKRSSKRLGAGLQGKYAF----GsdTQLfaeYAHEREYEDDTQDLTMslnsl 574  Pseudomonas a...
ZP_06871909   529 NIKLTRGYISDYKYTAEndln----trneKTNYWNGEINAKLGYKFky-----gDAflkAGLDKDLKGNQKVIWNe---- 595  Fusobacterium...
CAC14204      515 IADLNKTKTDVAGFGEQnrGitqmqfaarTEKSVRSGVGFDLRYQAa-----sWQPyvtTRWVKEWNNDLPTIQAsln-- 587  Pasteurella m...
YP_001406897  683 RIGYAYANVNGYDININgetl-----klkDITSQRIKYNGTAYYQTnentN----VyatAKLEYEFDNESELYAPni--- 750  Campylobacter...
NP_603291    1589 YGALKLEYGRISKIKEKtgeirl-evksnDYVSIKPEIGTELKYKYlft-nrkTLTvglGVAYENELGKVANPKNkarva 1666 Fusobacterium...
NP_602692    1226 YGSLNLEYGRVNKIKEKvgeirl-evkenYYVSVNPEIGAELTYKHlla-srkTFRmglGIAYENELGKVANGKNkarva 1303 Fusobacterium...
NP_602832    1496 YAALKLEYGRVSKIREKsgeikl-evkqnQYFSVKPEIGAELGFKHyfg--mkALKttlGVAYENELGRVANGKNkarvv 1572 Fusobacterium...
NP_604343    3031 YGALKVEYGRVSKIKEKsgemkl-evkenDYLSIRPEIGTELAYRHyfg--tkTLRtsvGVAYENELGRVANGKNkarva 3107 Fusobacterium...
ZP_07497409   344 EGGYQERNAGDFNLNMNsgse----tavdSIVGLKLDYAGKDGWSAsa----tLEGgpnLSYAKSQRTASLAGAGsqh-- 413  Escherichia c...
ZP_03369898   530 EDGYKERNAGDFNLSMNsgse----tavdSIVGMKLDYAGKDGWSAta----tLEGgpnLSYSKSQRTASLQGAAgqs-- 599  Salmonella en...
3KVN_X        575 -pgnrFTLEGYTPQDHLNRVSLGFSQKLAPELSLRGGYNWRKGED 618  Pseudomonas aeruginosa
ZP_06871909   596 -----nIDEEIKYDDLSKNIGIGMEYKVKQHSFNIELSRKYSKHY 635  Fusobacterium nucleatum subsp. nucleatum ATCC 23726
CAC14204      588 --gssFMTVLPSQDNQWVNIVAGLHFKPISSGFHANLAFRRDLGR 630  Pasteurella multocida subsp. multocida str. Pm70
YP_001406897  751 -----nKNISSKNDGFSAGGEVGAIYAINPLSNISFGLGAMGGKV 790  Campylobacter hominis ATCC BAA-381
NP_603291    1667 ytaadWYNLRGEKEDRRGNIKTDLTIGLEN---TRFGATANVGYD 1708 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
NP_602692    1304 ytnadWFNIRGEKEDRKGNIKFDLNIGLDN---QRVGVTANAGYD 1345 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
NP_602832    1573 dttadWFNVRGEKEDRRGNVKFDLNLGLDN---QKYGVTANVGYD 1614 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
NP_604343    3108 gttadWFNIRGEKEDRKGNVKVDLNVGIDN---QRLGVTGNVGYD 3149 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
ZP_07497409   414 --fnvDDGQKGGGINSLTSVGVKYS-----SKESSLNLDAYNWKE 451  Escherichia coli H736
ZP_03369898   600 --fgvDDGQKGGGINGLATIGVKYS-----SNDTALHLDAYQWKE 637  Salmonella enterica subsp. enterica serovar Typh...
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