Conserved Protein Domain Family
NirD
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COG2146: NirD (this model, PSSM-Id:225057 is obsolete and has been replaced by 441749)
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase [Inorganic ion transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
Links
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Statistics
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PSSM-Id: 225057
Aligned: 51 rows
Threshold Bit Score: 76.2303
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
16329978  46 KIMVWTKALA-QSELPPGSRQVVKv--------nQQAILLLNEGGTIHAVSNQCPHLKLP-MKSGKIKD-GAIVCPFHRS 114 Synechocystis sp. P...
18313550   1 ---MWRRTIS-AAALQKAGSAAVKidvkteagveSKVVFMAYVEGRLYAIDAVCTHAKC--ILGILDPAnLTVKCPCHHA 74  Pyrobaculum aerophilum
15897253   1 --MEYIRISR--TDFKTGEKRKIIlp------ngRELVVFYLGVDRFFVFDNKCPHLGCDlSKYGVIIKeE-LVCQCHFS 69  Sulfolobus solfatar...
15898081   2 NYPGEFHKLLtLDDIYEGEAKLVEvn--------rYEILVVNIKGEIKAYYARCAHALGL-IESNSFDGeEKIICPVHLW 72  Sulfolobus solfatar...
15898866   1 ---MLVRVSS-LSDLEEKKPRKFSin--------gIEVVIVRVGDKVFAIEAYCPHKGRN-LEYGEVEGyK-IRCDLHGY 66  Sulfolobus solfatar...
15899604   4 RLMVWKRTIS-AKALEKAKSAAVKv--------eDKVVFIANIKGTLYAMDAVCSHARC--ILDQLDEEkLTVKCYCHQA 72  Sulfolobus solfatar...
15899646   1 ---------MkTYIFFYIMLKVIEin--------gYPIMIYEKDGKEYTYLAGCPHKQRPiTAEGYKINlDNIVCPFYNA 63  Sulfolobus solfatar...
13541809   1 -MVFRKVSIS-TKIFEKTNSVVTWi--------aHKPVLLTKYNGDYFAMEAVCGHMGC--AILNKVEGkE-AVCPAHGA 67  Thermoplasma volcanium
18202977   1 --MAWKRTVS-VKALENAGGQIAVnv-------dGNVIFIARGKDGLHGLNAVCSHARC--ILGIFEEDtMTVRCSCHGA 68  Thermoplasma acidop...
16081935   1 -MVYRKVTIS-TKVFENTNAIVAWv--------sGRPVLLSKYEGKYYAMDAVCGHMGC--AILDKVEGkE-AVCPAHRA 67  Thermoplasma acidop...

16329978 115 AFDLCSGAVQEWSPFPpvvGglmgkm----saekpLPVFPVRVE-NGEVQVDLG 163 Synechocystis sp. PCC 6803
18313550  75 VFDLRTGAMLEPPYVApnaPkek----------mgVRTYPIREN-EGWIEVEV- 116 Pyrobaculum aerophilum
15897253  70 HFSIYSGEPKKGASKK---P---------------IKVYRVQVT-KDEVVISLI 104 Sulfolobus solfataricus
15898081  73 EYNARTGESINPVGSSlfpLdvkvegsdifvkvpsVPISEFKVKwFGMYRQRGV 126 Sulfolobus solfataricus
15898866  67 EYSLENGELIFNPYGKtsgWyfs----------pnLRIYKVEIK-GKDIFIQI- 108 Sulfolobus solfataricus
15899604  73 LFDLRSGKMLEPPYVApdaPkek----------lgLKTYQIRDN-GGWIEVDV- 114 Sulfolobus solfataricus
15899646  64 VFSLITGELIEPPKSKtprTp-------------nCKLIRARLInGEVVFEDKP 104 Sulfolobus solfataricus
13541809  68 RYDVTNGNKVSEPQIKpeaPceyds------igepLKTFKVLEN-NGFLEVDTD 114 Thermoplasma volcanium
18202977  69 RFEVTTGKMIEPPSVApnaPmek----------lgLKVYNVRDN-AGFLEVDVD 111 Thermoplasma acidophilum
16081935  68 RYDVTTGKKTADAVIRpevKceyne------asdtLKVYPVREN-NGFLEVDMP 114 Thermoplasma acidophilum
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