Conserved Protein Domain Family
rimO

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PRK14862: rimO (this model, PSSM-Id:237838 is obsolete)
30S ribosomal protein S12 methylthiotransferase RimO
Statistics
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PSSM-Id: 237838
Aligned: 282 rows
Threshold Bit Score: 769.021
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
226357149   7 RPAesgtagVKKVGFISLGCPKALVDSERILTQLRFEGYEVAPSYEDAHAVIVNTCGFITPAVEESLTAIGEALDATSKV 86 
289163959   1 MNH--------KVGFVSLGCPKALVDSERIITQLRAQGYELVSSYQDAGVVVINTCGFIDSAVKESLDTIKEAMAENGRV 72 
52840922    1 MNH--------KVGFVSLGCPKALVDSERIITQLKAQGYELVPTYQDAGVVVINTCGFIDSAVQESLDTIKEAMAENGRV 72 
54293668    1 MNH--------KVGFVSLGCPKALVDSERIITQLKAQGYELVPTYEDAGVVVINTCGFIDSAVQESLDTIKEAMAENGRV 72 
115314257   1 MIK------IPKIGFVSLGCPKNLVDSERIITKLKAEGYDLVDSYDNADMVIVNTCGFLNSAIDESLEVIGEAIAENGKV 74 
118496968   1 MIK------IPKIGFVSLGCPKNLVDSERIITKLKAEGYDLVDSYDNADMVIVNTCGFLNSAIDESLEVIGEAIAENGKV 74 
148360663   1 MNH--------KVGFVSLGCPKALVDSERIITQLKAQGYELVPTYEDAGVVVINTCGFIDSAVQESLDTIKEAMAENGRV 72 
156501726   1 MIK------IPKIGFVSLGCPKNLVDSERIITKLKAEGYDLVDSYDNADMVIVNTCGFLNSAIDESLEVIGEAIAENGKV 74 
296106272   1 MNH--------KVGFVSLGCPKALVDSERIITQLKAQGYELVPTYEDAGVVVINTCGFIDSAVQESLDTIKEAMAENGRV 72 
54296709    1 MNH--------KVGFVSLGCPKALVDSERIITQLKAQGYELVPTYEDAGVVVINTCGFIDSAVQESLDTIKEAMAENGRV 72 
226357149  87 IVTGCLGERPEKILERHPKVAAITGSEAVDDVMMHVRELLPIETDAFTGLLPvaaPgmradaeqpvsltdpnarhgdvla 166
289163959  73 IVTGCLGAKADIIKEACPDVLHISGAHAYEEVVNAVHQHLPPPTDPFTQLIP---P------------------------ 125
52840922   73 IVTGCLGAKADVIKNACPDVLHISGAHAYEEVVNAVHQYLPPPADPFTQLIP---P------------------------ 125
54293668   73 IVTGCLGAKADVIKNACPDVLHISGAHAYEEVVNAVHQHLPPPADPFTQLIP---P------------------------ 125
115314257  75 LVTGCLGNKADLIKEKHPEVLSITGPQDYENLIEAVHTHAPIFANDFVSLVP---P------------------------ 127
118496968  75 LVTGCLGNKADLIKEKHPEVLSITGPQDYENLIEAVHTHAPIFANDFVSLVP---P------------------------ 127
148360663  73 IVTGCLGAKADVIKNACPDVLHISGAHAYEEVVNAVHQHLPPPADPFTQLIP---P------------------------ 125
156501726  75 LVTGCLGNKADLIKEKHPEVLSITGPQDYENLIEAVHTHAPIFANDFVSLVP---P------------------------ 127
296106272  73 IVTGCLGAKADVIKNACPDVLHISGAHAYEEVVNAVHQHLPPPADPFTQLIP---P------------------------ 125
54296709   73 IVTGCLGAKADVIKNACPDVLHISGAHAYEEVVNAVHQHLPPPADPFTQLIP---P------------------------ 125
226357149 167 PSVKLTPRHYAYVKIAEGCNHTCAFCIIPKLRGRQVSRDAGSVLYESFRLIAGGTKELMIISQDTSAYGVDIRYRESEFQ 246
289163959 126 QGIKLTPRHYAYLKISEGCNQKCTFCIIPTMRGKLQSYPMAQVLTEAKRLKDAGVHEILVISQDTSAYGVDTRYQPVNWQ 205
52840922  126 QGIKLTPRHYAYLKISEGCNQKCTFCIIPTMRGKLQSYPMAQILTEAKKLKQAGVKELLVISQDTSAYGVDTRYQQVEWQ 205
54293668  126 QGIKLTPRHYAYLKISEGCNQKCTFCIIPTMRGKLQSYPMAQILTEAKKLKQAGVKELLVISQDTSAYGVDTRYQQVEWQ 205
115314257 128 QGIKLTPRHYSYLKISEGCNNTCTFCIIPDIRGKLKSRSIDNIMKEAEKLKNAGVKELLVISQDTSAYGVDIKYKSGIWN 207
118496968 128 QGIKLTPRHYSYLKISEGCNNTCTFCIIPDIRGKLKSRSIDNIMKEAEKLKNAGVKELLVISQDTSAYGVDIKYKSGIWN 207
148360663 126 QGIKLTPRHYAYLKISEGCNQKCTFCIIPTMRGKLQSYPMAQILTEAKKLKQAGVKELLVISQDTSAYGVDTRYQQVEWQ 205
156501726 128 QGIKLTPRHYSYLKISEGCNNTCTFCIIPDIRGKLKSRSIDNIMKEAEKLKNAGVKELLVISQDTSAYGVDIKYKSGIWN 207
296106272 126 QGIKLTPRHYAYLKISEGCNQKCTFCIIPTMRGKLQSYPMAQILTEAKKLKQAGVKELLVISQDTSAYGVDTRYQQVEWQ 205
54296709  126 QGIKLTPRHYAYLKISEGCNQKCTFCIIPTMRGKLQSYPMAQILTEAKKLKQAGVKELLVISQDTSAYGVDTRYQQIEWQ 205
226357149 247 GEQIRAHLTDLAVKLGEMGAWVRMHYVYPYPHVEKLVELMGQGKILPYLDVPLQHASPRILKLMRRPG-AGRQLDTIRRW 325
289163959 206 GKTINTRFFDLCEQLGQLGIWIRLHYVYPYPHVDEIIPLMRDGLILPYLDIPLQHANSKILKTMKRPAsSENTLLRIASW 285
52840922  206 GKTVNTRFYDLCEQLGELGIWVRLHYVYPYPHVDDIVPLMRDGLILPYLDIPLQHANSRILKAMKRPAsSENTLLRIASW 285
54293668  206 GKTVNTRFYDLCEQLGELGIWVRLHYVYPYPHVDDIVPLMRDGLILPYLDIPLQHANSRILKAMKRPAsSENTLLRIASW 285
115314257 208 NKEYQSNIIDLATALGDLDMWTRLHYVYPYPHVDKIVPLMAQGKILPYLDVSLQHSSPEVLKRMKRPAhTQKTLDRINKW 287
118496968 208 NKEYQSNIIDLATALGDLDMWTRLHYVYPYPHVDKIVPLMAQGKILPYLDVPLQHSSPEVLKRMKRPAhTQKTLDRINKW 287
148360663 206 GKTVNTRFYDLCEQLGELGIWVRLHYVYPYPHVDDIVPLMRDGLILPYLDIPLQHANSRILKAMKRPAsSENTLLRIASW 285
156501726 208 NKEYQSNIIDLATALGDLDMWTRLHYVYPYPHVDKIVPLMAQGKILPYLDVSLQHSSPEVLKRMKRPAhTQKTLDRINKW 287
296106272 206 GKTVNTRFYDLCEQLGELGIWVRLHYVYPYPHVDDIVPLMRDGLILPYLDIPLQHANSRILKAMKRPAsSENTLLRIASW 285
54296709  206 GKTVNTRFYDLCEQLGELGIWVRLHYVYPYPHVDDIVPLMRDGLILPYLDIPLQHANSRILKAMKRPAsSENTLLRIASW 285
226357149 326 RELCPELVIRSTFIVGFPGETEEEFQELLTFLEEARLDRVGAFAYSDVEEADARALPGHV--------PEEIKQERLARF 397
289163959 286 REICPDITLRSTFIVGFPGETEEEFEELLDFLEEAQLDRVGCFKYSPVEGAKANELSDPV--------PEEIKEERYHRF 357
52840922  286 REICPDITLRSTFIVGFPGETEEEFSELLAFLKEAQLDRVGCFKYSPVEGAKANDLDNPV--------SEDIKEERYHRF 357
54293668  286 REICPDITLRSTFIVGFPGETEEEFSELLAFLKEAQLDRVGCFKYSPVEGAKANDLDNPV--------SEDIKEERYHRF 357
115314257 288 RDICPDITISSTFIVGFPGETEADFKHLLDFAEKAQLDRVGCFKYSEVEGAKANQFDNLIfvatgilhTQDIKPEKSLKE 367
118496968 288 RDICPDITIRSTFIVGFPGETEADFEHLLDFAEKAQLDRVGCFKYSEVEGAKANQFDNLI--------SEEVKQQRLDEF 359
148360663 286 REICPDITLRSTFIVGFPGETEEEFSELLAFLKEAQLDRVGCFKYSPVEGAKANDLDNPV--------SEDIKEERYHRF 357
156501726 288 RDICPDITISSTFIVGFPGETEADFKHLLDFAEKAQLDRVGCFKYSEVEGAKANQFDNLIfvatgilhTQDIKPEKSLKE 367
296106272 286 REICPDITLRSTFIVGFPGETEEEFSELLAFLKEAQLDRVGCFKYSPVEGAKANDLDNPV--------SEDIKEERYHRF 357
54296709  286 REICPDITLRSTFIVGFPGETEEEFSELLAFLKEAQLDRVGCFKYSPVEGAKANDLDNPV--------SEDIKEERYHRF 357
226357149 398 MEVAQRISTEKLAEKIGRVMDVIIDEFNDDegdlpGtrLI-GRTKGDAPGIDGQVYL-YAGdfagQVKIGDIVRARIEDS 475
289163959 358 MQLQAEISRDKLESKVGKTQTVIIDEIHGD--------QIiARSKGDAPEIDGLVILpPNP----GIKSGSFAEVIITDS 425
52840922  358 MQVQAEISRNKLKNKIGSTQTVLIDEINDD--------QIiARSKSDAPEIDGLVYLpKTS----GITVGSFAEVVITDS 425
54293668  358 MQVQAEISRNKLKNKIGSTQTVLIDEITED--------QIiARSKSDAPEIDGLVYLpKIS----GITVGSFAEVVITDS 425
115314257 368 LSADKFIELF----KANTIFPALVAK------------HF-IPKLVKDTNLYSQLFL--------RVLVVSLIINLVVLI 422
118496968 360 MGLQAQISTDKLQRFVGTEQQVIIDAINKD-----EnyAI-GRTKYDAPEVDGQVIIg--DalerNLKVGEFATVEITES 431
148360663 358 MQVQAEISRNKLKNKIGSTQTVLIDEITED--------QIiARSKSDAPEIDGLVYLpKIS----GITVGSFAEAMITDS 425
156501726 368 LSADKFIELF----KANTIFPALVAK------------HF-IPKLVKDTNLYSQLFL--------RVLVVSLIINLVVLI 422
296106272 358 MQVQAEISRNKLKNKIGSTQTVLIDEITED--------QIiARSKSDAPEIDGLVYLpKIS----GITVGSFAEAMITDS 425
54296709  358 MQVQAEISRNKLKNKIGSTQTVLIDEITED--------QIiARSKSDAPEIDGLVYLpKIS----GITVGSFAEAMITDS 425
226357149 476 DEYDLFGEVL 485
289163959 426 DDYDLYAEFK 435
52840922  426 DDYDLYASLV 435
54293668  426 DDYDLYASLV 435
115314257 423 INFLLITFR- 431
118496968 432 TEYDLIAD-- 439
148360663 426 DDYDLYGDLE 435
156501726 423 INFLLITFR- 431
296106272 426 DDYDLYGDLE 435
54296709  426 DDYDLYGDLE 435
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