Conserved Protein Domain Family
rpsC

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PRK00310: rpsC (this model, PSSM-Id:234722 is obsolete)
30S ribosomal protein S3; Reviewed
Statistics
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PSSM-Id: 234722
Aligned: 963 rows
Threshold Bit Score: 288.591
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
254294434   1 MGQKVNPIGLRLGVNRTADSRWYADSVDFGRLLHEDLRLRKYIQEwrpkddnsgkrtgevLARRAGISKIIIER---PH- 76 
39938692    1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINN---------------FTKKSAISQIDIERlkeKNk 65 
42561264    1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFK---------------LLKDAAVSKIDIER---TT- 61 
148377803   1 MGQKVNPNGFRYGITKPINSVWFAEKQNYGDLLVQDAKIYKFFDK---------------LVRKYQIGNTSIKR---TKa 62 
197294625   1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINN---------------FSKRNSISQIEIQRlkeKTk 65 
194246739   1 MGQKSNPNGLRLGIIKNWDSKWFANFKKTPQFIHEDFCIRNFINK---------------NYSKALIAQIEIERskkKDk 65 
291320500   1 MGQKVNPNGFRYGITKPINSVWFAEKQNYGDLLVQDAKIYKFFDK---------------LVRKYQIGNTSIKR---TKa 62 
50364944    1 MGQKVSPNVLRLGIVRDWEDTWYAEKDQYVKWLDQDIKIREGVLK---------------LLKDAAVSKIKIER---TN- 61 
83319775    1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFK---------------LLKDAAVSKIDIER---TT- 61 
85057796    1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINN---------------FAKKSAISQIDIERlkeKNk 65 
254294434  77 KKCRITVHTSRPGMVIGKKGADIEKLRKDLSKFVTD---EVFVNLVEVRKPEIDAKLVAEDVARQLERRVSFRRAMKRTI 153
39938692   66 NRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQK---DVNLNVLEVKNSDKIALLIAQNMAEQLENRMFFRRVQKMAI 142
42561264   62 KDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNkklIVNVRVIEIKSPDADATLVARWIGEQISNRASFRTVQKLAI 141
148377803  63 QKVTVVLQTSQPAKLLGENGANIEKITQDLHKYLKNkslDINLQVSLLKQPELNARLAAEAIAQKLENRESFRVAQKLVI 142
197294625  66 NRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQK---DINLNILEVKNPDKTAVLVAQNMAEQLENRMKFRRVQKMAI 142
194246739  66 EIIKINLHVAKSNIINGKDNESLKKITKQIEQITKK---EVFFNVIEIKNPDKVAILVAKTMAEQLEQRFYFRRVQKMAI 142
291320500  63 QKVTVVLQTSQPAKLLGENGANIEKITQDLHKYLKNkslDINLQVSLLKQPELNARLAAEAIAQKLENRESFRVAQKLVI 142
50364944   62 SNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKDrnlKVEVKVIEVKNPDADATLVARWIGEQITNRASFRTVQKLAI 141
83319775   62 KDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNkklIVNVRVIEIKSPDADATLVARWIGEQISNRASFRTVQKLAI 141
85057796   66 NRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQK---DVNLNVLEVKNSDKVALLIAQNMAEKLENRMFFRRVQKMAI 142
254294434 154 QSAMRLGAEGIRLNVAGRLGGAEIARTEWYREGRVPLHTLRADIDYGVAEAMTTYGIIGIKVWIFKGEIMEHdpm----- 228
39938692  143 QKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGqtildtrk 222
42561264  142 KKALKAGAKGIKTAVSGRLGGVEMARTEGYLEGSVPLSTLRNNIDYALYEAPTTYGQIGVKVWINHGEVF---------- 211
148377803 143 NDALRAGAKGIKTQVSGRLNGVDMARAEGYSSGEMRLHTLRQDVDFAKATARTIYGAIGVKVWISKGELL---------- 212
197294625 143 QKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLHTLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGqtildtr- 221
194246739 143 QKVLKTGVKGVKTLISGRLGGLEMARSEGYLEGRVPLNTLRADVEYAFTEAHTTYGSFGVKVWIFHGDVLPGetild--- 219
291320500 143 NDALRAGAKGIKTQVSGRLNGVDMARAEGYSRGEMRLHTLRQDVDFAKATARTIYGAIGVKVWISKGELL---------- 212
50364944  142 RKALKAGVKGIKTSVSGRLGGVEMARTEGYIEGSVPLSTLRADIDYALYEAPTTYGQIGVKVWINHGEVIGGqsq----- 216
83319775  142 KKALKAGAKGIKTAVSGRLGGVEMARTEGYLEGSVPLSTLRNNIDYALYEAPTTYGQIGVKVWINHGEVFKK-------- 213
85057796  143 QKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGqtildtrk 222
254294434 229 -------------------ardRKAEASGDARARQSRPDNNSRG 253
39938692  223 pfasqssntpnrrprnfkggnnNHVNAKKN-------------- 252
42561264  212 ----------------------KKERMNNSQIMAKPRTNKGGKR 233
148377803 213 ----------------------------------------EGDK 216
197294625 222 ---------------kpfvsqnKFIKRPRYFKGGKNNHVDAKEN 250
194246739 220 ------------------trkpFAIKSNYISKNNKKSNNYKGDK 245
291320500 213 ----------------------------------------EGDK 216
50364944  217 -------------------rvsEKAPMNNDRRFNNKNNNRGGRK 241
83319775  214 ------------------------ERMNNSQIMAKPRTNKGGKR 233
85057796  223 --------------lfasqssnNPNRRPRNFKGGNNNHVNAKKN 252
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