Conserved Protein Domain Family
PRK11192

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PRK11192: PRK11192 
ATP-dependent RNA helicase SrmB; Provisional
Statistics
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PSSM-Id: 236877
Aligned: 153 rows
Threshold Bit Score: 627.74
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
119775874   1 MLFEDFQLDPELLESLKAMGHNTPTTIQRMTIPLAMEQRDILARAPTGTGKTASFLLPALQHLIDFPRRRPGQPRVLVLT 80 
127511701  14 MQFEDFHLDDTLLESLKAMGHLAPTTIQQQTIPLALEHKDILARAPTGTGKTASFLLPALQHLLDFPRRYSGQARVLILA 93 
77359468    1 MQFSEFDLDNKLLDAINKMGYETPTSIQQQAIPEALQGRDILASAPTGTGKTAAFLIPAIQYLLDFPRRDPGFARVLVMT 80 
212636948   4 MLFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLLPALQHIIDFPRRFGGQARVLVLT 83 
167622797   4 MQFEDLQLDPRLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLLPALQHLLDFPRRYGGRARVLILT 83 
161407972   1 -MFEQFDLDSELLASINKIGYTKPTSIQELVIPQAMVGKDVLASAPTGTGKTAAFLLPIAQHLLDYPRTKPGFPRVLILT 79 
109899589   1 -MFEQLELDDELCRAVADLGYSEPTSIQQLVIPAAMEGKDILASAPTGTGKTAAFLLPVCQFLLDYPRRHPGSTRILILT 79 
196157892   1 MTFEELELDDALCHAAADMGFEAPTNIQELVIPHALDGRDILASAPTGTGKTAAFLLPACQFLLDYPRKQPGATRILILT 80 
170725255   1 MLFEDLLLDPILLESLKAMGHHKPTTIQQQTIPLAMDQRDILARAPTGTGKTASFLLPALQHIIDFPRRFSGQARVVILT 80 
157960630   4 MQFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYGGRARVLILT 83 
119775874  81 PTRELASQIHRYASHLATNLELDIKLITGGVPYGPQEEMLKSNVDILVATPGRLLEYLDKGHFSAELVEVLVIDEADRML 160
127511701  94 PTRELASQVHRYASHLATGLGLDIAIITGGVPYAPQEQALKENIDILVATPGRLMEYLDKELFDAQSVEILVLDEADRML 173
77359468   81 PTRELAYQIHEQCELLAKRTNLKIGVVTGGINYGTHKEIFEKNNDILIATPGRLMEYLETENFHAEHVEMLIIDEADRML 160
212636948  84 PTRELASQIHRYASHLATDLDLDISIITGGVPYAPQEEALKKNVDILVATPGRLMEYLDKGLFNAEEVEVLVIDEADRML 163
167622797  84 PTRELASQIHRYASHLATGLGLDTVIITGGVPYGPQEEALQKNVDILVATPGRLMEYLDKGHFNAEEVEVLIIDEADRML 163
161407972  80 PTRELAIQIGEDSEQLTELTKIKTGVITGGVNYGSHADILTSTTDILVATPGRLLEYIENEQFDAREIEILVLDEADRML 159
109899589  80 PTRELAQQVYNQALELSRYTDIVCGVITGGINYGTDRDTFEKNLDILVATPGRLFEHIEQESFDCRDIECLILDEADRML 159
196157892  81 PTRELALQVYEQAVAITKHTQLVCGVITGGINYGTDKETLSKNLDILVATPGRLLEHIEKEAADCRDIECLILDEADRML 160
170725255  81 PTRELASQIHRYASHLAYELDLNTVIITGGVPYAPQEEALKGNVDILVATPGRLMEYLDKGLFNAEEVEILVIDEADRML 160
157960630  84 PTRELASQIHRYASHLATGLGLDTVIITGGVPYGPQEEALQKNVDILVATPGRLMEYLDKGHFNAEEVEVLIIDEADRML 163
119775874 161 DMGFGEVVKTIAVEASGRKQAMLFSATLEGGGVGSFARELLNEPMFVESEPPRSEKAKIHQWIHLADDKDHKFALLTHLL 240
127511701 174 DMGFSSAVQSIAIEAQQRKHNMLFSATLEGGGVSRFAEMLLTNPVTIETKPPRSEKAKIHQWMHLADDKEHKFALLCDIL 253
77359468  161 DMGFKKEMSRICDEAKNRRQCFLFSATLEGDSVERFAETTLNDPALLEAESSRKEKAKIHQWVHLADDYHHKLELLVNTL 240
212636948 164 DMGFSAVVETIAIESVGRKQTMLFSATLEGSDVGRFSHQLLSNPVKLEAEAPRSEKAKIHQWVHIADDREHKFALLYAIL 243
167622797 164 DMGFSAVVETIAIESVGRKQTMLFSATLEGSDVGRFSHELLTNPVKLEAEAPRSEKAKIHQWIHLADDKAHKFALLCALL 243
161407972 160 DLGFSETINRIVAEARWRKQTMLFSATLESPGVQLFAEEVLNEPVFLESKPSRKEKAVIHQWLHLADDANHKLNLLVNTL 239
109899589 160 DMGFSSIVNQISAEARWRKQSMLFSATLEGTGISRFAKDILNDPVELEAASSRKEQGKIHQWLHIADDAKHKYALLKHIL 239
196157892 161 DMGFSTVVNQIAAEARWRKQNLLFSATLEGKGVKTFAHDILNNPEIVEANPSRKEKNKIHQWYHLADDMNHKQALLVNIL 240
170725255 161 DMGFSAVVETIAIESVGRKQTMLFSATLEGSDVGRFSHQLLTDPVKVEAEAPRSEKAKIHQWIHIADDKEHKFKLLCSIL 240
157960630 164 DMGFSAVVESIAIESVGRKQTMLFSATLEGSDVGRFSHNLLTNPVKLEAEAPRSEKAKIHQWIHLADDKAHKFALLCALL 243
119775874 241 KQeEVKRAIVFCKTRDVVASLEGQLQQAGIACAFMRGDMDQKKRFQALGRFTKGEVNVLLATDVAARGIDIEDITHVINF 320
127511701 254 KReEVSRAIVFVKTREVVASLEGQLQQAGIHCAFMRGDMEQKARFQALGRFTKGEVNVLLATDVAARGIDIDGITHVINF 333
77359468  241 NGpDVTKAIVFVKTRERLETLIGELTTNDVKAAWLRGEMPQDKRMKAMENFHSGKTRILVATDVAARGIDVADISHVINF 320
212636948 244 QQeEVERAIVFVKTREAVASLDGLLQKQGITCSFMRGDMEQKARFQALGRFTKGEVNVLLATDVAARGIDVDDITHVINF 323
167622797 244 KQeEVQRTIVFVKTREAVASLEGLLQKEGITCAFMRGDMEQKARFQALGRFTKGEVNILLATDVAARGIDIDDITHVINF 323
161407972 240 KQeGVERTVVFANKRETVQYLSGKLYAEELPCVWLEGKMPQDKRNKAIERFKKGEVKVLVATDVAARGLDIDDISHVINF 319
109899589 240 TH-QVESAVVFVKTRDRLNELKQILERDGFTVCWLQGEMPQDKRNLSMAKFRSGEVKILIATDVAARGIDVESISHVINY 318
196157892 241 KQeTTTSAVVFVKTRDRLQMLKDFLASQDIQVCWLQGEMPQDKRNAAMARFKNGEVPILLATDVAARGIDVPNVSHVINF 320
170725255 241 QQeETQRAIVFVKTREAVASLEGMLQRVGIPCSYMRGDMEQKQRFQALGRFTKGEVNVLLATDVAARGIDVEDITHVINF 320
157960630 244 KQeEVQRTIVFVKTRESVASLEGLLQKEGITCAFMRGDMEQKARFQALGRFTKGEVNILLATDVAARGIDIDDITHVINF 323
119775874 321 DMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDMRILGKVERYIEQPLKRRVIEELRPKHKeAkvPTKKKVKAKDAKAKA 400
127511701 334 DMPRSADTYVHRIGRTGRAGNKGTAISLVEAHDMRVVAKIERYIEQPLKRRVIDSLRPKHK-E----------------- 395
77359468  321 DLPRTADIYVHRIGRTGRAGKKGIAISLVEAHDIGILYKIERYIEQKLKRRVIKGLEPKHK-EakPPAKKRKDP------ 393
212636948 324 DMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVVGKIERYIEQPLKRRFIKDLRPKNK-EakPPGKKKVKDTGKTFS 402
167622797 324 DMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVVGKIERYIEQPLKRRFVKDLRPKNK-E----------------- 385
161407972 320 DMPRKVDIYIHRIGRTGRAGKKGTAISLVEAHDMGVIGKIERYTKERLSRRFIQELRPKNK----ESRVVNKKAKIKLTT 395
109899589 319 DMPRTADVYVHRIGRTGRAGNKGTAISLVEAHDIGIVPKIERYTEQPLKRRVIDELRPKNKeAkpPAKRKISNKAKKAAG 398
196157892 321 DMPRKADIYVHRIGRTGRAGAKGTAISLVEAHDFEMVTKAARYMGEPLKARVIDELRPKNK-T--PKIGPKK-------- 389
170725255 321 DMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVVGKIERYMDQPLKRRFIKDLRPKNK-EakPPGKNKVKPSEKSFS 399
157960630 324 DMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVVGKIERYIEQPLKRRFVKDLRPKNK-EakPPGKKKPGPEGKNFS 402
119775874 401 KNAKpkaapgrgpatpnaktadsrggdnvrsggrastrrtgtdekgdgldkherrghdkqerrshdkgdtgrsqhgarer 480
127511701     --------------------------------------------------------------------------------    
77359468      --------------------------------------------------------------------------------    
212636948 403 K------------------------------------------------------------------------------- 403
167622797     --------------------------------------------------------------------------------    
161407972 396 SQ------------------------------------------------------------------------------ 397
109899589 399 IPLK---------------------------------------------------------------------------- 402
196157892     --------------------------------------------------------------------------------    
170725255 400 KK------------------------------------------------------------------------------ 401
157960630 403 KK------------------------------------------------------------------------------ 404
119775874 481 tegqsyasrdgnprgaKREVGEKtpHSRSDKRHQDTDR 518
127511701 396 ----------------AKVPTKK--KVKSSDKKSPKKA 415
77359468  394 ----------------VKMKAKK--KAKVKKKK----- 408
212636948 404 ----------------KNKKKKK--------------- 410
167622797 386 ----------------AKPPGKK--KPGPEGKNFSKKN 405
161407972 398 ----------------KKAKTKK--QVKKKAKRAKAAK 417
109899589 403 ----------------KKAKKKK------------NRG 412
196157892 390 ----------------KKVKAKD--KTKAKAKPKKKK- 408
170725255 402 ----------------NKKKKKK--------------- 408
157960630 405 ----------------NKKKKKK--------------- 411
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