1MPG


Conserved Protein Domain Family
AlkA

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COG0122: AlkA (this model, PSSM-Id:223200 is obsolete and has been replaced by 439892)
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3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [Replication, recombination and repair]
linked to 3D-structure
Statistics
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PSSM-Id: 223200
Aligned: 41 rows
Threshold Bit Score: 182.251
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1MPG_B    10 YDWSWMLGFLAARAVSSVETVADSYYARSLAVGEY--RGVVTAIPD--IARHTLHINLSAGLEPVAAECLAKMSRLFDLQ 85  Escherichia coli
15895964   3 FDMIEEKKDSVIVRNVENFELKDIFDCGQCFRWHRqeNGNYIGIAFekVVEVQKIGEDVVIYNINEEEFKNVWSEYFDLY 82  Clostridium acetobu...
19173404   1 MRNEGWTPLRASEAIDLEKTLFSGQVFSFKRTDKGeyTGTLGGCLVsfLQDGEKVLYRILSGDKAPEDVEVDISYFFTLE 80  Encephalitozoon cun...
20092367   1 ------------MYRLEPEIFNLDYTLDCGQVFRWekSGDWWTGVVgdHVIRLSQEEDSGELLIDSRLPPEFFSHYFRLD 68  Methanosarcina acet...
15839523  12 VTFAGAAGFAHTLAPLRRGQQDPCFRVPGDGTIWR--TSLLPTGPV--TARISRAGRDAARCVAWGSGAEEFVDMAPAML 87  Mycobacterium tuber...
10720150   2 RIPVGDFDLEMTQRSGQTSQPPWREVEGAFRELLIieGVPCPVEVRneAGVLRVRPYVDVPQKTLREKIEYIFDLKFDIE 81  Methanothermobacter...
14521480   1 ------MMSMIDLAKTTHEMIKNGTWKYEKGIFWQ--ALPQGIIGYdgENFIIPEGLSRKEGKIVKEKISFILGLDTDLD 72  Pyrococcus abyssi
14590652   1 ------MIGMIDLAKTTNEMIKNGTWKYEKGTFWQ--ALPQGIVGYdgENFILPDELNKRDRKLVKEKIKFILGLDTDLD 72  Pyrococcus horikoshii
15790318   8 LDDVPGAVDVQATLESGQTYLWWRPDGDTYRTDGLs-GGDAWYRTVidDDVIDVRQTATAIEWRGTTDAAPIVRDALGLH 86  Halobacterium sp. N...
1709456   10 INKSELCLANVLQAGQSFRWIWDEKLNQYSTTMKIgqQEKYSVVILrqDEENEILEFVAVGDCGNQDALKTHLMKYFRLD 89  baker's yeast
1MPG_B    86 CNPQIVNGALGRLGAAR------PGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDdfpeyIC--FPT 157 Escherichia coli
15895964  83 RDYGEIKKELSRDPLLKksv-dfgEGIRILRQDPFEILLSFIISANNRIPMIKKCINNISEKAGKKLEyk-gkIYyaFPT 160 Clostridium acetobu...
19173404  81 INLRPLLQMWGFDTDGS------LAGLRALRYALVPTIFSFICSSNNNISRITKMVGFLYSKGEFIMKyk-glDFhhFPS 153 Encephalitozoon cun...
20092367  69 DDLPSIYESINKDLLINrai-nkYSGLRLIRQDPWECLISYMLATASSIPTIQKRIYLLSRFFGQELEe----gYfsFPD 143 Methanosarcina acet...
15839523  88 GAADDASDFVPLHPAVAaahrrlPNLRLGRTGQVLEALIPAVIEQRVPGADAFRSWRLLVSKYGTQAPgpappGMrvPPS 167 Mycobacterium tuber...
10720150  82 DFYTFLEDKNLSYTLDSs-----rGLRLFLAKDPFECVISSIASANCSVVRWTRSIEDIRRLWGQANTfn-geTFhtFPS 155 Methanothermobacter...
14521480  73 SFYSEIEDSKFSFLIDEf-----yGLTIPAAPSLYQAMVEVIAQQQVSFEFAQKAISNLVKLVGRKVN-----DLylFPE 142 Pyrococcus abyssi
14590652  73 SFYSEISDSKFSFLIDEf-----yGLTIPAAPNVYQAIVEVIAQQQVSFEFAQKAIKNLVILSGKKIN-----DLylFPG 142 Pyrococcus horikoshii
15790318  87 DDLDAVRGAARSDPLITaaw-daYDGLRIVRDPFFGCLVSFICSAQMRVERIFEMQERLRREYGTPITfd-gqTVysVPE 164 Halobacterium sp. N...
1709456   90 VSLKHLFDNVWIPSDKAfak-lsPQGIRILAQEPWETLISFICSSNNNISRITRMCNSLCSNFGNLITtidgvAYhsFPT 168 baker's yeast
1MPG_B   158 PQRLAAADPQALK------------------ALGMPLKRAEALIHLANAALEG------------TLPMTIPGDVEQAMK 207 Escherichia coli
15895964 161 VDKLHEFTEKDFE-------------------ECTAGFRAKYLKDTVDRIYNGe----------lNLEYIKSLNDNECHE 211 Clostridium acetobu...
19173404 154 LEKLVGIEGELR--------------------ANGFGYRSRYICSAAEYLMEN-------------YPRLQQASG--VRD 198 Encephalitozoon cun...
20092367 144 PDTLAEADLSLLD-------------------KCKLGFRTERIKEAARDVASGe----------lDLNVLYRLEYRYARE 194 Methanosarcina acet...
15839523 168 AEVWRHIPSWEFH------------------RANVDPGRARAVVGCAQRAASL------------ERLVSLP--AARAAE 215 Mycobacterium tuber...
10720150 156 PHVLTGVAEGSLEdlqraednlpsdfsfndlRSCGVGYRAPYIRETSRILAEEm-----------DIRRIDGMDYDDARE 224 Methanothermobacter...
14521480 143 PSDIIRLGDR--I------------------REAKLGYRASYILSITQEYLRGr-----------LKLDLKDLNEDEAVN 191 Pyrococcus abyssi
14590652 143 PQDIIRLGEK--I------------------KEAKLGYRGNYILSVTEEYLKGr-----------LKLDLRDMDEKEAIR 191 Pyrococcus horikoshii
15790318 165 PSALAAATESDLR-------------------DLKLGYRAPYVQRTAAMVASGe----------lTKRDIDGRAYELARE 215 Halobacterium sp. N...
1709456  169 SEELTSRATEAKLr------------------ELGFGYRAKYIIETARKLVNDkaeanitsdttyLQSICKDAQYEDVRE 230 baker's yeast
1MPG_B   208 TLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGM---TPAQIR--------------------------RYAE 258 Escherichia coli
15895964 212 ELKKFMGVGPKVADCIMLFSMQKYSAFP-VDTWVKKAMMSLyvaPDVSLKki----------------------rdFGRE 268 Clostridium acetobu...
19173404 199 MMVSIKGVGDKIADCILLIGLGNLSVVPVDTHIFRHSRKLFgvrGKTLRRgmyg------------------tvqrLYRE 260 Encephalitozoon cun...
20092367 195 RLMRLRGIGEKVADCVLLFAFEKMEAFP-VDTHVRQIIQHYhidDSYFETctn---------------------lsCMGE 252 Methanosarcina acet...
15839523 216 ALTSLPGVGVWTAAETTQRVFGDADAVSVGDYHIPKMIGWTl--VGRPVDdag---------------------mlELLE 272 Mycobacterium tuber...
10720150 225 LLLELSGVGPKVADCILLYGFRKTEAFP-VDVWIRRIMNHIhpgRNFNDRsm----------------------veFARR 281 Methanothermobacter...
14521480 192 YLTKFKGIGRWSAELFLMYGLR-KNVYPAGDLGLRRGIAKIfglNPKKVKekd---------------------vrEIIE 249 Pyrococcus abyssi
14590652 192 YLTRFRGIGKWSAELFLMYGLR-KNVYPAGDLGLRRGIAKIfnlSLKKVTeri---------------------vrEIIE 249 Pyrococcus horikoshii
15790318 216 TMTDFVGVGNKVADCVLLFSLGYLAAVP-LDTWMQTAIEDHypdCERGRYedt---------------------srAFRE 273 Halobacterium sp. N...
1709456  231 HLMSYNGVGPKVADCVCLMGLHMDGIVPVDVHVSRIAKRDYqisANKNHLkelrtkynalpisrkkinleldhirlMLFK 310 baker's yeast
1MPG_B   259 RWKPWRSYALLHIWYT-----EGWQPDEA 282 Escherichia coli
15895964 269 KFGSLSGFAQQYLFYYarennIQL----- 292 Clostridium acetobutylicum
19173404 261 RFGEYAGVAQLYIFKKmvdlrKAEPKRDD 289 Encephalitozoon cuniculi
20092367 253 WGREYFGYYCGYAQQYlfyqkRLEGFVSL 281 Methanosarcina acetivorans C2A
15839523 273 PMRPHRHRVVRLLEASglarePRRGPRLP 301 Mycobacterium tuberculosis CDC1551
10720150 282 EYGEMADYVQLYLFNHarrsgLLDRLRQG 310 Methanothermobacter thermautotrophicus
14521480 250 PYGKWKSLLAFYILCYdrktqKPGVRK-- 276 Pyrococcus abyssi
14590652 250 PYGRWKSLLAFYILCYdr-ktEMEVRKWK 277 Pyrococcus horikoshii
15790318 274 HLGPHAGYTQTYLFHYlrsggSAPEPTE- 301 Halobacterium sp. NRC-1
1709456  311 KWGSYAGWAQGVLFSKeiggtSGSTTTGT 339 baker's yeast
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