1CDR


Conserved Protein Domain Family
LU

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cd00117: LU (this model, PSSM-Id:238065 is obsolete and has been replaced by 467060)
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Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these domains is similar to that of snake venom neurotoxins.
Statistics
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PSSM-Id: 238065
Aligned: 79 rows
Threshold Bit Score: 41.3256
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1CDR       1 LQCYNCpn--ptADCKTAvnCSSDFDACLITKAG----------LQVYNKCWkfeHCNFNDvttr---------lrenEL 59  human
549165    24 LQCMQCes---nQSCLVEe-CALGQDLCRTTVLRewqd--drelEVVTRGCAhseKTNRTMsyrmg--------smiiSL 89  house mouse
AAB62974  25 LRCIQCes---nQDCLVEe-CALGQDLCRTTVLRewed--aeelEVVTRGCAhkeKTNRTMsyrmg--------svivSL 90  Norway rat
P55000    23 LKCYTCkepmtsASCRTItrCKPEDTACMTTLVTveaeypfnqsPVVTRSCSs--SCVATDpds-----------igaAH 89  human
AAD51039  19 LRCMQCed---sQNCLVKe-CALGQDLCRTTVLHewed--dnelELEMRDCAhyeKTNRTMsyrvn--------skiiSL 84  Chinese hamster
O94772    26 LWCQDCtlttnsSHCTPKq-CQPSDTVCASVRITdpss--srkdHSVNKMCAs--SCDFVKrhffsdylmgfinsgilKV 100 human
AAG40760  23 LRCMQCks---nGDCRVEe-CALGQDLCRTTIVRmwee--geelELVEKSCThseKTNRTMsyrtg--------lkitSL 88  African green monkey
AAG40761  23 LRCMQCks---nGDCRVEe-CALGQDLCRTTIVRmwee--geelELVEKSCThseKTNRTMsyrtg--------lkitSL 88  crab-eating macaque
AAG40762  24 LRCMQCng---hGNCRVEe-CALGQNLCRTTSVRhwee--geevEMVEKSCThseKTNRTMsfrtg--------vritTL 89  douroucouli
BAB21948  23 LQCYTCanpvsaSNCVTTthCHINETMCKTTLYSleivfpflgdSTVTKSCAs--KCEPSDvdg-----------igqTR 89  house mouse
1CDR      60 TYYCCKKDLCNFN 72  human
549165    90 TETVCATNLCNRP 102 house mouse
AAB62974  91 TETVCATNLCNRP 103 Norway rat
P55000    90 LIFCCFRDLCNSE 102 human
AAD51039  85 AEVVCATDVCNRP 97  Chinese hamster
O94772   101 DVDCCEKDLCNGA 113 human
AAG40760  89 TEVVCGLDLCNQG 101 African green monkey
AAG40761  89 TEVVCGLDLCNQG 101 crab-eating macaque
AAG40762  90 TEAVCGLDLCNQD 102 douroucouli
BAB21948  90 PVSCCNSDLCNVD 102 house mouse
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