3SUC


Conserved Protein Domain Family
Pectate_lyase_3

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pfam12708: Pectate_lyase_3 
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Pectate lyase superfamily protein
This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
Statistics
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PSSM-Id: 403800
Aligned: 50 rows
Threshold Bit Score: 83.1362
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3SUC_A         22 GVSV-KT-YGAKGD--GVTDDIRAFEKAI------ESGFPVYVPYGTFMVSRGI-------KLPSNTVLTGAG------- 77  Bacillus phage...
WP_012567734    4 QVSI-TD-FGARGD--GRTDNKVAIQKALdh--akTTGKTVYVPEGTFLHKGML--------HADGVDLVGAG------- 62  Rhodospirillum...
WP_015808504   63 IFKV-DD-YGAKPD--DDQFDDMAIQKAIdaaeanPGAGVVFFSPGKYLIAPDEdakkqirISKSGIVLKGSGs------ 132 Pedobacter hep...
Q7URR5         63 SINA-TH-FGLSAD--SDADQSIAMADAIshaansADIDTVYVPSGTYRFSRPI-------NLRSGVNFIGDGa------ 125 Pirellula sp.
jgi:Mpal_0809 553 ATNV-RS-SGLKGD--GVTDDTAALQSLLtn---lPSGSTIYFPPGHYRIDGPI-------SINKPFTLFGES------- 611
jgi:Mpal_0826  99 ATNV-RS-SGLKGD--GVTDDTAALQSLLtk---lPSGSTIYFPPGQYRIDGPI-------SINRSVTLFGES------- 157
Q184L1         12 WINV-VE-RGIKND--GSYNIGPALQDIIde--ieTDFCVLYFPKGKYLFTSGV-------KINKEIVLQGDS------- 71  Clostridioides...
Q184L0         13 WINV-LD-YGICND--ETKDVSFKLQEIMda---vPEDSIIYFPKGKYLFESGV-------KIKKRLTLCGDS------- 71  Clostridioides...
Q184L3         10 WINV-LE-LNSKIDitGKYDVSNMIQNIVsd--ksLEGSIIYFPKGNYLFEKGI-------KISQQITLQGDS------- 71  Clostridioides...
Q09C01         75 IIDVtQApYYANNT--GGADVTAILQRAIddagalSGGAVVFLPKGTYRVAPPSgknaaltLNKSHVVLRGQGptatfly 152 Stigmatella au...
3SUC_A         78 ------KRNAVIRFMDSVg--RGESLMYNENVT--TG--------NENIFLSSFTLDgnNKRLGQGISGIggsresNLSI 139 Bacillus phage...
WP_012567734   63 -------AKSVLKA-------VGASSSFDDQTVrlSGsg------------------gsIRNLTLDSDAT------SRGY 104 Rhodospirillum...
WP_015808504  133 ------KTGGTEIYQANMrinGRQFLFKPADSG--TEklavivqdAGRETFAVVVKD--ASKLKVGQDVVirh-rsEEFT 201 Pedobacter hep...
Q7URR5        126 -------GRTILEGRG-----LRTYLLNARRMN--GS--------EALIAGLTLRNP--HRTVVMDGVSRlhf-rhVEFA 180 Pirellula sp.
jgi:Mpal_0809 612 ------GTVFDCEKATQYvftLNAKGTSASPMTg-MTitgivfegPGIETDPAMIDAyyLQNFHVSYVKFh-----NIGY 679
jgi:Mpal_0826 158 ------GTVFDCQRATQYvftLNAGGSSTSRLKg-VTitgivfegPGIETDPAMIDAynLQNFHVSYVKFh-----NIGY 225
Q184L1         72 ------N---SSTGTTQF---ITRGVENMSIITltGK--------KQCIKNINFYSD--SCEIQVNKEPP------TKGN 123 Clostridioides...
Q184L0         72 ------YILANVPKNTAG---VTQFTFKGKKNPksEN--------IAIITAKSVRHC--IKNICFYSDSC------DRDM 126 Clostridioides...
Q184L3         72 -------YYG-----------GGNQVSNLDKKQ------------PIIGTTNFITRG--VSNMSIITL------------ 107 Clostridioides...
Q09C01        153 ndapnmRGRSVVRVGPAS---AGSWTSGGTSTVsaSAdlpnrttrIPLTSVSGFSVGq-WIVLRTDMTSAlid-elGMAG 227 Stigmatella au...
3SUC_A        140 -------RA--CH-NV--YIRDIE-AVDC-TLhgiDITCGG-LdypYLGD--GTT------APNPSE------NIWi--E 188 Bacillus phage...
WP_012567734  105 -------TGdsTKiWV--TGARDWvIDHV-TI---NNSFGA-----------GIL------VGYGASdgrisnNTVrstN 154 Rhodospirillum...
WP_015808504  202 rlyfaplEL--KPqWTrlFGDNGG-MQIY-EIhtiTGISGN-KvsfKNPIhlDIR------MVKSAS------WTIesyN 264 Pedobacter hep...
Q7URR5        181 -------GG--IVrLQ--NCSDIS-LEAN-LFr--ENRGKS-GyasNNCDriRIVhnrfesIENGSVnlsrhrDCYvawN 244 Pirellula sp.
jgi:Mpal_0809 680 -------AA--IR-VN--TCTDVT-IEKS-IF---DNVFQS-----------GL----------GYG------VSItdrS 715
jgi:Mpal_0826 226 -------AA--IR-VN--TCTDVT-IEES-IF---DNVFQS-----ELGY--GVS------ITDHSD------RIYv-hD 268
Q184L1        124 -------PK--YH-YE--MIINKN-EKNV------EMNNVSaIlydNSKN-----------MIKGLG------HY----E 163 Clostridioides...
Q184L0        127 -------TS--NHePP--TDGKPR-FHHNvII---NYRNIS-----------AVI------CEDKQGe----pGHY---E 167 Clostridioides...
Q184L3        108 ------------------SGTSQC-IKNI-NF---YYDSHDiEkipPKNV--SAI------TEYGET------QGLshfE 150 Clostridioides...
Q09C01        228 -------KG-----WE--SLEGAT-FYRQ-IT---AIDTAA-K---------TLT------IDIPLR------STLktrD 266 Stigmatella au...
3SUC_A        189 -----------NCEATGf-----GDDGITThH-----------SQYINILNCYSHDprltaNCNGFEIDD-GSRhVVLs- 239 Bacillus phage...
WP_012567734  155 adsihisqashDIVVSGnrvsggGDDGIAVvSy---------mRNGAPVRDITITG------NTVTDNLW-GRN-ISVvg 217 Rhodospirillum...
WP_015808504  265 -----------HIDQCGv-----EDILFTSnWkn--------yPEEFIHHKNAIHDy----AYEAVGMEYlKNS-WVR-- 313 Pedobacter hep...
Q7URR5        245 -----------EITAKSl-----LDSGYAGiR-----------LPNDAINNLVEHNli-enHGRGIFVLS-SSEnNVIr- 294 Pirellula sp.
jgi:Mpal_0809 716 -----------DRIYIH--------DNFFVtK-----------GRHSVTTGTSQTD-----LPVADYVQS-----VTVe- 754
jgi:Mpal_0826 269 -----------NFFVTR------GRQGVAT-GtctsnlpeaeyVQSVTVENNYFENt----TEQAVSAQKvTTGpYIIr- 325
Q184L1        164 -----------NIYISGf-----SGTGIRI-------------PYYSIVNDITVSS-----CGLGIDT---GID-TIIs- 204 Clostridioides...
Q184L0        168 -----------NLSFSGf-----SGIALDM-------------PNNSTANDITIFT-----SGLGISTGE-NST-IANs- 210 Clostridioides...
Q184L3        151 -----------HLFISGf-----SGIGIEI-------------PYYSTGNDITVSS-----CGLGMRLG--EKSmLSSs- 193 Clostridioides...
Q09C01        267 -----------NARVYKi-----GAHISEV-Gv---------eNLAIGMRENTTPG------TGGTDFSTpGTGaYEMhd 314 Stigmatella au...
3SUC_A        240 --NN----RS---KGCYG-GIE 251 Bacillus phage phi29
WP_012567734  218 geDVtirdNHvegNKAGRaGIY 239 Rhodospirillum centenum
WP_015808504  314 --NC----EF---HDWNE-GVF 325 Pedobacter heparinus
Q7URR5        295 --NN----IV---LGATKqGAL 307 Pirellula sp.
jgi:Mpal_0809 755 --NN----YF---ENTTE-GAI 766
jgi:Mpal_0826 326 --GN----VM---NNCAR-GVD 337
Q184L1        205 --NS----RI---SKCQN-GMR 216 Clostridioides difficile 630
Q184L0        211 --------KV---WGCVD-GMI 220 Clostridioides difficile 630
Q184L3        194 --------KI---YECKN-GME 203 Clostridioides difficile 630
Q09C01        315 sfAL----KL---NHTVD-GWL 328 Stigmatella aurantiaca DW4/3-1
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