Conserved Protein Domain Family
Mfd

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COG1197: Mfd (this model, PSSM-Id:224118 is obsolete and has been replaced by 440810)
Transcription-repair coupling factor (superfamily II helicase) [Replication, recombination and repair, Transcription]
Statistics
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PSSM-Id: 224118
Aligned: 45 rows
Threshold Bit Score: 1071.89
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15677148    1 MTYPIPKP--REKSRWPNLSQGSLPLALARYLPHKRLKV-VLTQDAEQALRLQTAWRfFRPHDTAVFLPDWETLPYERFS 77   Neisseria meningi...
15612632   15 QAIVQGLEvnMKEQLVSGLSGSARPAVMAALYKETRRPQlVITYNLYQAQKIFEDLVeLVGADHVLLYPVNDLISSEIAI 94   Bacillus halodurans
585481     15 KSIINGLHegLKEQLLAGLSGSARSVFTSALANETNKPIfLITHNLYQAQKVTDDLTsLLEDRSVLLYPVNELISSEIAV 94   Bacillus subtilis
15896463   17 QDAIYKIKsnEFPMELSGISESGKSYLISGLYEELDNPFlVITDSDSEAKKIYEDLL--FYTQSVYYLPTKEVVFYNIYA 94   Clostridium aceto...
19703371    1 ------------------MEKKFRGEIPFWLKNKKNNl-vYICSSNRNIDDYFFVLK---------DFYKGKILRIKKEN 52   Fusobacterium nuc...
15671995   14 QKWQQGFSk-RERTLLTGLSGTAKSLVMANAYENVADKYiIVTDSQFHANELYDELStLLGEEKVFQFFSDDNIYAEFAL 92   Lactococcus lacti...
15926180   15 QDLNQVFG--QANTLVTGLSPSAKVTMIAEKYAQSNQQLlLITNNLYQADKLETDLLqFIDAEELYKYPVQDIMTEEFST 92   Staphylococcus au...
15899955   15 KKWHQNLTd-KKRQLILGLSTSTKALAIASS-LEKEDRIvLLTSTYGEAEGLVSDLIsILGEELVYPFLVDDAPMVEFLM 92   Streptococcus pne...
15674256   14 QSWHSGLTt-LGRQLVMGLSGSSKTLAIASAYLDDQKKIvVVTSTQNEVEKLASDLSsLLDEELVFQFFADDVAAAEFIF 92   Streptococcus pyo...
16799323   15 RAVLNALDekEKSQLVTGLTGSSRALFASVVEGASKRPVvFVTHNLYHAQKLYDDLLsLIDVDRLFLYPADELISSELSI 94   Listeria innocua
15677148   78 PHQDLVSERLSALWQIKSGAAD-VLFVPVATAMQKLPPVPFLAGRTFWLKTGQTL-DIGRLKSDLVDAGYNHVSHVVAAG 155  Neisseria meningi...
15612632   95 ASPEMKAQRIDVLNQLVAGFSg-IVVVPLAGMRRLLPPSSLWKESQIRLSVGDDIgDLESLIRRLVRNGFTRVDMVTTPG 173  Bacillus halodurans
585481     95 ASPELRAQRLDVINRLTNGEAp-IVVAPVAAIRRMLPPVEVWKSSQMLIQVGHDI-EPDQLASRLVEVGYERSDMVSAPG 172  Bacillus subtilis
15896463   95 VSGDLRWERLKVIRKMMSRGKK-IIVTSVENLAAVYLPVELYKEYTFKLTLGDTV-EAKELQKKLVQCGYEHVESVDAKG 172  Clostridium aceto...
19703371   53 EARELKKYNYDLLELINSNEK---FIILIS--LDYFLEDYYSEANSIFIEKGKNL-NIKDLEEKLIDADFEKTYMVAQRK 126  Fusobacterium nuc...
15671995   93 ASKDRVAYRLEALNFLLDEKSTgFLVVPFLALRSYLPSPENFLENYLLLTSGDEY-DLSNLVNLLSKAGYEKTQRVMTPG 171  Lactococcus lacti...
15926180   93 QSPQLMSERIRTLTALAQGKKg-LFIVPLNGLKKWLTPVEMWQNHQMTLRVGEDI-DVDQFLNKLVNMGYKRESVVSHIG 170  Staphylococcus au...
15899955   93 SSQEKIISRVEALRFLTDSSKKgILVCNIAASRLILPSPNAFKDSIVKISVGEEY-DQHAFIHQLKENGYRKVTQVQTQG 171  Streptococcus pne...
15674256   93 ASMDKALSRIETLQFLRNPKSQgVLIVSLSGLRILLPNPDVFTKSQIQLTVGEDY-DSDTLTKQLMTIGYQKVSQVISPG 171  Streptococcus pyo...
16799323   95 SSPELRGQRVEALDFLLSGKPg-IVIVPVAGLRKMLPPVSLWKHFNISIVEGEEI-DPDVLRQKLVTMGYTMSGMVNTPG 172  Listeria innocua
15677148  156 EFAVRGGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDSE----AQK---IFRSRFRE 228  Neisseria meningi...
15612632  174 ECSVRGGIIDLYPLTEEDPIRIELFDTEIDSIRTFTIEDQRSKDSLSEVVIGPAAEIIMDEEhfiqGAS---RLEDRLSQ 250  Bacillus halodurans
585481    173 EFSIRGGIIDIYPLTSENPVRIELFDTEVDSIRSFNSDDQRSIETLTSINIGPAKELIIRPEekarAME---KIDSGLAA 249  Bacillus subtilis
15896463  173 QFSIRGGIVDIYSPIDDVPYRIEFFGDEIESIRSFNTESQRSIEKVNKIEVFPAKEIILTDEalnkGYEaikDELNQSLD 252  Clostridium aceto...
19703371  127 EYSIRGDILDIFNINQDNPVRIEFFGNEVDRITYFDINSQLSIEKKDSIELYIDN----NKN------------------ 184  Fusobacterium nuc...
15671995  172 EFSMRGDIVDIYPLDAENPVRLEFFGDEVDTIRSFDVESQRSLTSLERLEIYPASDFILTDKefdkGAK---SLTEMTNL 248  Lactococcus lacti...
15926180  171 EFSLRGGIIDIFPLIGE-PIRIELFDTEIDSIRDFDVETQRSKDNIEEVDITTASDYIITEEvirhLKE---ELKTAYEN 246  Staphylococcus au...
15899955  172 EFSLRGDILDIFEISQLEPCRIEFFGDEIDGIRSFEVETQLSKENKTELTIFPASDMLLREKdyqrGQS---ALEKQISK 248  Streptococcus pne...
15674256  172 EFSRRGDILDIYEITQELPYRLEFFGDDIDSIRQFHPETQKSFEQLEGIFINPASDLIFEVSdfqrGIE---QLEKAL-Q 247  Streptococcus pyo...
16799323  173 EFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSyypdIVT---RLEKKMTL 249  Listeria innocua
15677148  229 EV-DGNPn--DAAVYKAVSNG-------HFGAGVEYYLPLFFENeLETLFDYIGEDALFVSL--DDVHAEANRFWSDVKS 296  Neisseria meningi...
15612632  251 TLkKVKKkevKEKLTEQISFDiselkqkHPFPSMYKYISLFYDD-TYSLFSYVPSNGVIFVDemSRVKEMSESLEKEEAE 329  Bacillus halodurans
585481    250 SLkKLKAdkqKEILHANISHDkerlsegQTDQELVKYLSYFYEK-PASLLDYTPDNTLLILDevSRIHEMEEQLQKEEAE 328  Bacillus subtilis
15896463  253 RLkGNNEe-sYNKLKETMEYNlealkerAGFETIDTFIPYFYDN-TSSFFDYLKN-SIIFVDnyERCKGKIDSVYCEFEQ 329  Clostridium aceto...
19703371  185 ----------KKDIFSLMSMN-------------KNKIEYYYEN-NDILQAKIKRLINENLDreEDILNKIAELSKIGIQ 240  Fusobacterium nuc...
15671995  249 LTdPSAKs--YMEEVISAAQn------hYYHKDLRKFAEYFYDK-KTSLLNYFPKNVQIFIDdfQKVNEMNNKLEMELAD 319  Lactococcus lacti...
15926180  247 TRpKIDKs-vRNDLKETYESFklfestyFDHQILRRLVAFMYET-PSTIIEYFQKDAIIAVDefNRIKETEESLTVESDS 324  Staphylococcus au...
15899955  249 TLsPILKs--YLEEILSSFHq------kQSHADSRKFLSLCYDK-TWTVFDYIEKDTPIFFDdyQKLMNQYEVFERDLAQ 319  Streptococcus pne...
15674256  248 TAqDDKKs--YLEDVLAVSKn------gFKHKDIRKFQSLFYEK-EWSLLDYIPKGTPIFFDdfQKLVDKNARFDLEIAN 318  Streptococcus pyo...
16799323  250 TLnELKEnedKQALVENLEEDlemlrsgVKPDMFFKYIGLAYPD-PASLFDYLPKNTAILLDefARILETEESLEREEAE 328  Listeria innocua
15677148  297 RYAMAQGDETypPLLPQYLYLSA-DVFAGRLKNYG----QVLPDVS-GK--E----YTLPDLAVNRQADeplqALKDFQT 364  Neisseria meningi...
15612632  330 WHTTLIEQGE--IVHDVTLAHSVlEQMKQGVLPIVylslFVRHVPS-TNpqNiisfQCKSMQNFHGQMP----LLQSEVK 402  Bacillus halodurans
585481    329 FITNLLEEGK--ILHDIRLSFSFqKIVAEQKRPLLyyslFLRHVHH-TSpqNivnvSGRQMQSFHGQMN----VLAGEME 401  Bacillus subtilis
15896463  330 NYENFLERGD--ILPKQGNIIVSkENIYEILKTEKrinlESIGRAAnNNfrTgiafEEITLSSYQGQMD----LLINDIK 403  Clostridium aceto...
19703371  241 IEIQKFSEEEl----------------------------KQFEVID---------------------------RVKKLSE 265  Fusobacterium nuc...
15671995  320 FILSEKAMER--GFEGQTYLLDTmAKVRNY-KPATffsnFQKGLGN-LRfeQlynfKQHSMQQFFGQLE----LFYTEVE 391  Lactococcus lacti...
15926180  325 FISNIIESGNg-FIGQSFIKYDDfETLIEG-YPVTyfslFATTMP--IKlnHiikfSCKPVQQFYGQYD----IMRSEFQ 396  Staphylococcus au...
15899955  320 YFTEELQNSK--AFSDMQYFSDIeQIYKKQ-SPVTffsnLQKGLGN-LKfdKiyqfNQYPMQEFFNQFS----FLKEEIE 391  Streptococcus pne...
15674256  319 LLTEDLQQGK--ALSNLNYFTDNyRELRHY-KPATffsnFHKGLGN-IKfdQmhqlTQYAMQEFFNQFP----LLIDEIK 390  Streptococcus pyo...
16799323  329 WQTETLSRME--TVRDVQVSHSFkKLLDENHSPKIyltlFQKQMAS-MRvsKttniVYKQMQQFHGQMN----VLKTEIE 401  Listeria innocua
15677148  365 AFDG---RILLCAESLGRRETMLGFLQQNGLKAKPVSDWQGFLSahEPLMITVAPLAYGFKLGGLQspnqqqptpspvge 441  Neisseria meningi...
15612632  403 RWISsqfATVFIAATRERAKRLNHVLAEEGIEALvVDGEAPLTP--GQAQIMVGALTSGFELTLHK-------------- 466  Bacillus halodurans
585481    402 RFKKsnfTVVFLGANKERTQKLSSVLADYDIEAAmTDSKKALVQ--GQVYIMEGELQSGFELPLMK-------------- 465  Bacillus subtilis
15896463  404 ELKEekyRTVILCGTKSKGQRLVETLGDRGIESVYKDSILNVDy--GEVVISPGSQLRGFRYPEIR-------------- 467  Clostridium aceto...
19703371  266 N--T---KITIYSEEA---TRYKEIFKGYPVKFEK----------------Y--PLFEGYKTDD---------------- 303  Fusobacterium nuc...
15671995  392 RFIKqefTVVLAVSS----EKLRKSLHELDLSLQeVDRESIQVG---KVNLIDLQLSNGFNFLDEK-------------- 450  Lactococcus lacti...
15926180  397 RYVNqnyHIVVLVETETKVERMQAMLSEMHIPSi-TKLHRSMSS--GQAVIIEGSLSEGFELPDMG-------------- 459  Staphylococcus au...
15899955  392 RYKKmdyTIILQSSNSMGSKTLEDMLEEYQIKLDsRDKTNICKE---SVNLIEGNLRHGFHFVDEK-------------- 454  Streptococcus pne...
15674256  391 RYQKnqtTVIVQVESQYAYERLEKSFQDYQFRLPlVSANQIVSR---ESQIVIGAISSGFYFADEK-------------- 453  Streptococcus pyo...
16799323  402 SWHKnnyAVVILAPNLERAEKMQQTLADYDMESTiLKKESDVPKy-GMVQFVIGTFQNGFELPLAK-------------- 466  Listeria innocua
15677148  442 gwgegkavaaqtefsaaainplpsplpqereqsaaavsdslkaaavstesslplgtsnlhgqirqqpapspvgegwgegk 521  Neisseria meningi...
15612632      --------------------------------------------------------------------------------      Bacillus halodurans
585481        --------------------------------------------------------------------------------      Bacillus subtilis
15896463      --------------------------------------------------------------------------------      Clostridium aceto...
19703371      --------------------------------------------------------------------------------      Fusobacterium nuc...
15671995      --------------------------------------------------------------------------------      Lactococcus lacti...
15926180      --------------------------------------------------------------------------------      Staphylococcus au...
15899955      --------------------------------------------------------------------------------      Streptococcus pne...
15674256      --------------------------------------------------------------------------------      Streptococcus pyo...
16799323      --------------------------------------------------------------------------------      Listeria innocua
15677148  522 avaaqtefpasatnplpsplpqereqsaaavsddlktksslhpvannlhgqirqqptpspvgegwgegkavaaqtefsaa 601  Neisseria meningi...
15612632      --------------------------------------------------------------------------------      Bacillus halodurans
585481        --------------------------------------------------------------------------------      Bacillus subtilis
15896463      --------------------------------------------------------------------------------      Clostridium aceto...
19703371      --------------------------------------------------------------------------------      Fusobacterium nuc...
15671995      --------------------------------------------------------------------------------      Lactococcus lacti...
15926180      --------------------------------------------------------------------------------      Staphylococcus au...
15899955      --------------------------------------------------------------------------------      Streptococcus pne...
15674256      --------------------------------------------------------------------------------      Streptococcus pyo...
16799323      --------------------------------------------------------------------------------      Listeria innocua
15677148  602 atnplpsplpqereqsaavvsdslkaaavstesslppgksnlhgqiqqqpapspvgegwgegkavaaqsaIAVITESDLY 681  Neisseria meningi...
15612632  467 ----------------------------------------------------------------------LVVITEEEIF 476  Bacillus halodurans
585481    466 ----------------------------------------------------------------------LAVITEEELF 475  Bacillus subtilis
15896463  468 ----------------------------------------------------------------------LCVISDKEIF 477  Clostridium aceto...
19703371  304 ----------------------------------------------------------------------KLILTDREIK 313  Fusobacterium nuc...
15671995  451 ----------------------------------------------------------------------LVVMTEHEIF 460  Lactococcus lacti...
15926180  460 ----------------------------------------------------------------------LVVITERELF 469  Staphylococcus au...
15899955  455 ----------------------------------------------------------------------ILLITEHEIF 464  Streptococcus pne...
15674256  454 ----------------------------------------------------------------------LALITEHEIY 463  Streptococcus pyo...
16799323  467 ----------------------------------------------------------------------VAIISETELF 476  Listeria innocua
15677148  682 QYVARSRIHnrrKKHAAVSDGLLRDLAEINIGDPVVHEEHGIGRYMGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHL 761  Neisseria meningi...
15612632  477 AKKVKRPQR---KQK-LSNAERIKNYSELKVGDLVVHTNHGIGKYLGIETLEINGVHKDYLHIRYAGNDKLYVPVEQIDQ 552  Bacillus halodurans
585481    476 KNRVKKKPR---KQK-LTNAERIKSYSELQIGDYVVHINHGIGKYLGIETLEINGIHKDYLNIHYQGSDKLYVPVEQIDQ 551  Bacillus subtilis
15896463  478 GTAKKKKEK----RKNKKGVGKIKSFTELKPGDYIVHVNHGIGVFKGIKQLEVQGHKKDYLELSYAVDDKLYVPVEQLDL 553  Clostridium aceto...
19703371  314 GIRVKR-------ERVEKKALRYKTVDEIKEQDYVIHENFGVGIFLGLENIE----GQDYLKIKYADEDKLFVPVDSINK 382  Fusobacterium nuc...
15671995  461 GKMRKKKAR---KLN-ITNAERLKDYNELAVGDFVVHKNHGIGKYLGLQTLEVGGMHRDYLTIQYQNGDTISVPVDHLDL 536  Lactococcus lacti...
15926180  470 KSKQKKQRK---RTKAISNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGQTHRDYIKLQYKGTDQLFVPVDQMDQ 546  Staphylococcus au...
15899955  465 QKKLKRRFR---RQH-VSNAERLKDYNELEKGDYVVHHIHGIGQYLGIETIEIKGIHRDYVSVQYQNGDQISIPVEQIHL 540  Streptococcus pne...
15674256  464 HKKIKRRAR---RSN-ISNAERLKDYNELAVGDYVVHNVHGIGRFLGIETIQIQGIHRDYVTIQYQNSDRISLPIDQISS 539  Streptococcus pyo...
16799323  477 NKKIKKVKK---RQK-LSNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDL 552  Listeria innocua
15677148  762 ISRYSGQAHENIALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINELDYQAFADGFGYEETEDQAAA 841  Neisseria meningi...
15612632  553 VQKYVGAEDKDPKLYSLGKSDWKKVKRRVQSSVEDIADDLIKLYAEREASKGFAFAPDGPEQAEFEASFPYQETEDQLRA 632  Bacillus halodurans
585481    552 VQKYVGSEGKEPKLYKLGGSEWKRVKKKVETSVQDIADDLIKLYAEREASKGYAFSPDHEMQREFESAFPYQETEDQLRS 631  Bacillus subtilis
15896463  554 VQKYIGSEGKVPKVNKLGSSEWTKAKNKVRKSINEIAEELVKLYAVRTTVNGFKYSKDTVWQKQFEEEFPYNETQDQLLA 633  Clostridium aceto...
19703371  383 IEKFINISDVIPEIYKLGRKGFKRKKAKLSEDIEIFAKEIIKIQAKRNLGNGFKFSKDTVMQEEFEETFPFTETPAQSKA 462  Fusobacterium nuc...
15671995  537 LSKYTAGEGKSPKINKLNDGRWRKTMSSVSKQVEDISDDLIKLYAERQAKKGFAFSPDDTSQEEFDSGFSYVETEDQMRS 616  Lactococcus lacti...
15926180  547 VQKYVASEDKTPKLNKLGGSEWKKTKAKVQQSVEDIAEELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKS 626  Staphylococcus au...
15899955  541 LSKYISSDGKAPKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDDDQDAFDDAFPYVETDDQLRS 620  Streptococcus pne...
15674256  540 LSKYVSADGKEPKINKLNDGRFQKTKQKVARQVEDIADDLLKLYAERSQQKGFSFSPDDDLQRAFDDDFAFVETEDQLRS 619  Streptococcus pyo...
16799323  553 VQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETDDQLRS 632  Listeria innocua
15677148  842 IAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSRFNN 921  Neisseria meningi...
15612632  633 IQEIKEDMEKERPMDRLLCGDVGYGKTEVAIRAAFKAIMNGKQVAILVPTTILAQQHFETIQERFADYPINIGVLSRFRS 712  Bacillus halodurans
585481    632 IHEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTTILAQQHYETIKERFQDYPINIGLLSRFRT 711  Bacillus subtilis
15896463  634 IDEIKNDMESGKVMDRLICGDVGYGKTEVAIRAAFKTVMDGKQVAFLVPTTILAEQHYNNFKKRFKDFPVEVDMVSRFRS 713  Clostridium aceto...
19703371  463 IEDVKRDMESGKVMDRLICGDVGFGKTEVAIRATFKAVMDGKQVILLVPTTVLAEQHYERFSERFKNYPVHIEILSRVQS 542  Fusobacterium nuc...
15671995  617 INEIKHDMELERPMDRLLVGDVGFGKTEVAMRAAFKAINDGKQVAVLVPTTVLAEQHFNNFTERFINFGVNVEVLSRFQT 696  Lactococcus lacti...
15926180  627 IDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQLMSRFRT 706  Staphylococcus au...
15899955  621 IEEIKRDMQASQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNIDVLSRFRS 700  Streptococcus pne...
15674256  620 IKEIKADMESMQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVAVLVPTTVLAQQHYENFKARFENYPVEVDVLSRFRS 699  Streptococcus pyo...
16799323  633 ISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHYETMKERFQGFPIEIGLLSRFRT 712  Listeria innocua
15677148  922 SKATKAALEGMADGTVDIVIGTHKLVQDDIKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALE 1001 Neisseria meningi...
15612632  713 RKEQSQTLKGLKAGSVDLVVGTHRLLSKDVQFKDLGLLIVDEEQRFGVTHKEKIKQLKANIDVLTLTATPIPRTLHMSML 792  Bacillus halodurans
585481    712 RKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKQIKANVDVLTLTATPIPRTLHMSML 791  Bacillus subtilis
15896463  714 QAQQKATFKALKEGNIDIIIGTHRILNKEITFKDLGLLIIDEEQRFGVSHKEKLKKFKKNIDVLTLSATPIPRTLHMSLT 793  Clostridium aceto...
19703371  543 KKEQTESLKRIENGSADLVIGTHRLLSDDIKFKDVGLLIIDEEQKFGVKAKEKLKKIKGDIDVLTLTATPIPRTLNLSLL 622  Fusobacterium nuc...
15671995  697 KTQQTEILAKLKKGRVDLIIGTHRLLSKDVEFFDLGLMIIDEEQRFGVKHKERLKELKTQVDVLTLTATPIPRTLHMSML 776  Lactococcus lacti...
15926180  707 PKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKHNVDVLTLTATPIPRTLHMSML 786  Staphylococcus au...
15899955  701 KKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSML 780  Streptococcus pne...
15674256  700 KKEQAETLERVRKGQIDIIIGTHRLLSKDVVFSDLGLIVIDEEQRFGVKHKETLKELKTKVDVLTLTATPIPRTLHMSML 779  Streptococcus pyo...
16799323  713 KKQQTETLKGMKNGTVDIVVGTHRLLSKDVEYQDLGLLVVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSML 792  Listeria innocua
15677148 1002 GLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEAR-IGVAHGQLRE 1080 Neisseria meningi...
15612632  793 GVRDLSVIETPPENRFPVQTYVVEYNSPLVREAIERELSRGGQVYFLYNRVENIERMANEISMLVPDAR-VSFAHGQMKE 871  Bacillus halodurans
585481    792 GVRDLSVIETPPENRFPVQTYVVEYNGALVREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDAK-VAYAHGKMTE 870  Bacillus subtilis
15896463  794 GVRDISVIETPPEERYPVQTYVVEYNDQLIRDAIMREIGRDGQVFFVYNKVESIKEMAANLGKLIPEAR-IAIAHGQMSE 872  Clostridium aceto...
19703371  623 GIRDLSVIDTSPEGRQKIHTEYIDNNKNFIKEIILSEISREGQVFYIFNSVKRMESKVKEIRELLPEYIkVSYIHGQMLP 702  Fusobacterium nuc...
15671995  777 GIRDLSVIETPPTNRYPVQTYVMETNYGVVRDAVLREISRGGQVYYVYNRVDTIEQKVSQLEELIPEAR-IGFIHGQMTE 855  Lactococcus lacti...
15926180  787 GVRDLSVIETPPENRFPVQTYVLEQNMSFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDAN-IAVAHGQMTE 865  Staphylococcus au...
15899955  781 GIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIVQKVSELQELIPEAS-IGYVHGRMSE 859  Streptococcus pne...
15674256  780 GIRDLSVIETPPTNRYPVQTYVLENNPGLVREAIIREMDRGGQIFYVYNKVDTIEKKVAELQELVPEAS-IGFVHGQMSE 858  Streptococcus pyo...
16799323  793 GVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDAR-VATAHGQMGE 871  Listeria innocua
15677148 1081 RELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTP--EYITKDAE 1158 Neisseria meningi...
15612632  872 SELESIMLAFLEGESDVLVTTTIIETGVDIPNVNTLIIHGADKMGLSQLYQIRGRVGRSNRVAYAYFTYQrdKVLSEVAE 951  Bacillus halodurans
585481    871 NELETVMLSFLEGESDVLVSTTIIETGVDIPNVNTLIVFDADKMGLSQLYQLRGRVGRSNRVAYAYFTYRrdKVLTEVAE 950  Bacillus subtilis
15896463  873 RELEKVMIDFMEGNYDILLCTTIIETGIDIQNVNTLIIYNADKMGLSQLYQLRGRVGRTNRMAYAYFTYKkdKILTEVAE 952  Clostridium aceto...
19703371  703 RDIKKNIQDFENGNVDVLVATTIIENGIDIENANTMIIEGVEKLGLSQVYQLRGRIGRSTKKSYCYMLTN--ENKTKNAK 780  Fusobacterium nuc...
15671995  856 VQLENTLLAFIAGDYDVLVATTIIETGVDIPNANTLFIENADMMGLSQLYQLRGRVGRSNRVAYAYFMYRpeKILSEVSE 935  Lactococcus lacti...
15926180  866 RDLEETMLSFINNEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQLYQLRGRVGRSSRIGYAYFLHPanKVLTETAE 945  Staphylococcus au...
15899955  860 VQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRpeKSISEVSE 939  Streptococcus pne...
15674256  859 IQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRpdKVLTEVSE 938  Streptococcus pyo...
16799323  872 SELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQkdKILREEAE 951  Listeria innocua
15677148 1159 KRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQVGFTLYTEMLKQAVRDLKKgrqpdLDAPLGI-TTEIKL 1237 Neisseria meningi...
15612632  952 KRLQAIKEFTELGSGFKIAMRDLAIRGAGNLLGAQQHGFIESVGFDLYSQMLKEAIEKRKG-----EQPKEEPrNVEIDV 1026 Bacillus halodurans
585481    951 KRLQAIKEFTELGSGFKIAMRDLTIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEERKG-----DTAKTEQfETEIDV 1025 Bacillus subtilis
15896463  953 KRLKAIKEFTQLGSGFKIAMRDLEIRGAGNIMGSAQHGHMATIGYDLYCRMLEDTIKEIKG------EIQNEPvETTVDL 1026 Clostridium aceto...
19703371  781 KREESIRE-FDNLTGIDLAMEDSKIRGVGEILGEKQHGAVETFGYNLYMKMLNEEILKLKG------EAEEELdEVDVEL 853  Fusobacterium nuc...
15671995  936 KRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGSEQSGFIDSVGFDLYSQLLEEAIHAKLG-----TSKQKRTsNVEISL 1010 Lactococcus lacti...
15926180  946 DRLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDTVGFDLYSQMLEEAVNEKRGi----KEPESEVpEVEVDL 1021 Staphylococcus au...
15899955  940 KRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRNGn---aNANTRTKgNAELIL 1016 Streptococcus pne...
15674256  939 KRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEQAIASKQG-----KTTVRQKgNTEINL 1013 Streptococcus pyo...
16799323  952 KRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKP-----KEEQKQIvPVEIDI 1026 Listeria innocua
15677148 1238 HSPALLPEDYCPDIHERLVLYKRLAVCETVQQINTIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGIDA-IDAAGEAV 1316 Neisseria meningi...
15612632 1027 QVDAYIPDSYIQDAKQKIEMYKRFRGVETIEEINDLKDEMFDRFGEYPQEVSDLLQLTTIKIIAYQEGVES-IVESKGQW 1105 Bacillus halodurans
585481   1026 ELDAYIPETYIQDGKQKIDMYKRFRSVATIEEKNELQDEMIDRFGNYPKEVEYLFTVAEMKVYARQERVEL-IKQDKDAV 1104 Bacillus subtilis
15896463 1027 KVDAYIPSLYIEDETLKISIYKKIAAIDSYEEMMDVKEELEDRFSSIPQSVNNLMTIAYLRSIGRQLGILE-IKDKMTQL 1105 Clostridium aceto...
19703371  854 NFPRFLPDNYIEK-NEKVKIYKRALALKNLDELENLYNELEDRFGKIKSEAKGFFDFIKIRIIARDLGITTiKQDKENKD 932  Fusobacterium nuc...
15671995 1011 ELDAFIPAYYISDERQKIEIYKRIRQIDSREIYEELQEELVDRFGEYPDEVAYLLEIGLLKPFADNVLVEK-IEKSRFEA 1089 Lactococcus lacti...
15926180 1022 NLDAYLPTEYIANEQAKIEIYKKLRKTETFDQIIDIKDELIDRFNDYPVEVARLLDIVEIKVHALHSGITL-IKDKGKII 1100 Staphylococcus au...
15899955 1017 QIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQR-VERKDNKI 1095 Streptococcus pne...
15674256 1014 QIDAYLPDDYIADERQKIDIYKRIREIQSREDYLNLQDELMDRFGEYPDQVAYLLEIALLKHYMDNAFAEL-VERKNNQV 1092 Streptococcus pyo...
16799323 1027 QADAYIPEYYITDGRQKIEMYKRFRNIESLLDLEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIES-VEQEQNKI 1105 Listeria innocua
15677148 1317 TVTFGKNN--NVDPTEIILLIQNDKK-YRLA---GADKLRF-TAEMENIEVRINTVKNVLKTLQNRCLP 1378 Neisseria meningitidis MC58
15612632 1106 IILLSPETteGIDGAKLFEVIHKLDQqVGLGtegERIKLTL-KTKQLGTNQLLEVTETLLASLADVKKQ 1173 Bacillus halodurans
585481   1105 RLTISEEAsaEIDGQKLFELGNQYGRqIGLGmegKKLKISI-QTKGRSADEWLDTVLGMLKGLKDVKKQ 1172 Bacillus subtilis
15896463 1106 EIKFESND--RVNKKLINGLLKNYSKsILFKm--GDNPVILyNLKDVKREDMLENLQKFLKYMKSLVET 1170 Clostridium acetobutylicum
19703371  933 RILINFNEk-KINVDKIIYLLSNKKImYSKF----TRTIGY-NGDIFEFFKLYSS-------------- 981  Fusobacterium nucleatum subs...
15671995 1090 TVTLEKVAntTYDPQDYFKALAKTSMkASVGekyGKMTFRF-KIENRNSVVLLSEIMNFIEELSKIRDS 1157 Lactococcus lactis subsp. la...
15926180 1101 DIHLSVKAteNIDGEVLFKATQPLGRtMKVGvqnNAMTITL-TKQ----NQWLDSLKFLVKCIEESMRI 1164 Staphylococcus aureus subsp....
15899955 1096 TIQFEKVTqrLFLAQDYFKALSVTNLkAGIAenkGLMELVF-DVQNKKDYEILEGLLIFGESLLEIKES 1163 Streptococcus pneumoniae TIGR4
15674256 1093 IVRFEVTSltYFLTQDYFEALSKTHLkAKISehqGKIDIVF-DVRHQKDYRILEELMLFGERLSEIKIR 1160 Streptococcus pyogenes M1 GAS
16799323 1106 TMLFSESGtaGIRGDIVMQIIGEFGRmVGVGmegTQLKITI-NVQNKPLKEWLYQVKSLAEKLRGAMKE 1173 Listeria innocua
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