Conserved Protein Domain Family
RRM_BOULE

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cd12673: RRM_BOULE 
RNA recognition motif (RRM) found in protein BOULE
This subgroup corresponds to the RRM of BOULE, the founder member of the human DAZ gene family. Invertebrates contain a single BOULE, while vertebrates, other than catarrhine primates, possess both BOULE and DAZL genes. The catarrhine primates possess BOULE, DAZL, and DAZ genes. BOULE encodes an RNA-binding protein containing an RNA recognition motif (RRM), also known as RBD (RNA binding domain) or RNP (ribonucleoprotein domain), and a single copy of the DAZ motif. Although its specific biochemical functions remains to be investigated, BOULE protein may interact with poly(A)-binding proteins (PABPs), and act as translational activators of specific mRNAs during gametogenesis.
Statistics
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PSSM-Id: 410074
Aligned: 6 rows
Threshold Bit Score: 167.367
Created: 13-Sep-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative RNA
Feature 1:putative RNA binding site [nucleic acid binding site]
Evidence:
  • Comment:Based on sequence similarity to the mouse deleted in azoospermia-like.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  # #                          #### #   #### #                          #######
Q8N9W6        31 IPNRIFVGGIDfKTNESDLRKFFSqYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEaeklnYKDKKLNIGPAIR 110 human
XP_007898258  31 IPNRIFVGGIDfKTNENDLRNFFSqYGTVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEaeklnYKDKKLNIGPAIR 110 elephant shark
KFV73722      37 IPNRIFVGGIDfKTNENDLRKFFAqYGCVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEaeklnYKDKKLNIGPAIR 116 Struthio camelu...
XP_005989571  44 IPNRIFVGGIDfKTNENDLRKFFAqYGTVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEaeklnYKDKKLNIGPAIR 123 coelacanth
XP_009558291  40 IPNSIYVGGIDfKTDENELRKLFAqYGSVKDVRIVTDRTGASKGYGFITFETQEDAQKILQEtkilnYKGRKLDVGPARR 119 common cuckoo
ADW41783      45 IPNRIFVGGIDfKTNESDLRRFFSqHGAVKEVKIVIDRAGVSKGYGFVTFETQEDTERILHDadrlcFRDKRLNIGQAVR 124 rainbow trout
Feature 1        #
Q8N9W6       111 K 111 human
XP_007898258 111 K 111 elephant shark
KFV73722     117 K 117 Struthio camelus australis
XP_005989571 124 K 124 coelacanth
XP_009558291 120 K 120 common cuckoo
ADW41783     125 K 125 rainbow trout

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