Conserved Protein Domain Family
HpnR_B12_rSAM

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TIGR04367: HpnR_B12_rSAM 
hopanoid C-3 methylase HpnR
Members of this are family are a B12-binding domain/radical SAM domain protein required for 3-methylhopanoid production. Activity was confirmed by mutant phenotype by disrupting this gene in Methylococcus capsulatus strain Bath. This protein family should only occur in genomes that encode a squalene-hopene cyclase (see TIGR01507). [Fatty acid and phospholipid metabolism, Biosynthesis]
Statistics
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PSSM-Id: 275160
Aligned: 11 rows
Threshold Bit Score: 915.64
Created: 10-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_09865156    1 MKFLAVHPSPLMYTRVFLRLEPLGLELVADTVRRLGHEVYLIDLQVETHRDFVRVLDTWRPDVVAFSLNYLANVPEVIDL 80  Methylomicrobiu...
EDZ39867       1 MRFLAVHPSPLMYTKIYLRLEPLGLELLGAAARNAGHDVRLIDLQVENHKDYLRLISEWKPDAVGFSVNYLANIPEVIDL 80  Leptospirillum ...
ZP_08896775    1 MRLLAVHPSSLMYTKVFLRLEPLGLELVAGAARNKGHEVEIIDLQVEKHPDYWERIERFRPHAICFSGNYLANVPEIIDL 80  Gluconacetobact...
ZP_01128076    1 MKVLLVHPSALMYSEIYLRLEPLGLERVGGAIRRAGHEVRLVDLQIFKHRDYFKELESFQPDFVGISLNYLANIPEALDL 80  Nitrococcus mob...
ZP_06907528    1 MRLLLIHPSALMYSEIFLRLEPLGLERVAGAAREAGHEVSVIDLQTESHTALTRLLESFRPEAIGVSLNYLANIPEAIEI 80  Streptomyces pr...
WP_010960068   1 MKVFCVHPSPLMYTKVFLRLEPLGLELVAESLRRAGHDIRLMDLQVESHADFLRELDTWRPDVVCFSLNYLANVPEVIDL 80  Methylococcus c...
WP_012403467   1 MKVLAVHPSGLMYTRVYLRLEPLGLETVAAVIREAGHDIRLIDLQVESHRALHKVVRTWQPDVVCFSGNYLANIPEIIDL 80  Burkholderia ph...
WP_015927516   1 MKLLAVHPSGLMYTKIFLRLEPLGLEIVAGAARAAGHEVALIDLQVESHADFDRLLRSFRPDVIAFSCNYLANVPEIIDL 80  Methylobacteriu...
WP_013032298   1 MRFLAVHPGPLMYTEVFLRLEPLGLELVAEAVRRGGHEVRIIDLQVESHAAYFKLIEHWRPHVIAFSCNFLANVPEIVDL 80  Nitrosococcus h...
WP_015743833   1 MKVLLVHPSSLMYAEIFLRLEPLGLERVAQAARMAGHEVRLFDLQVFRREDYLQELQDFRPQTVGLSLNFLANLPEVVEL 80  Candidatus Meth...
WP_011436906   1 MRVLLVHPSALMYSKIFLRLEPLGLERVAAALLAAGHEVSMLDLQVEKPAAYARHLRKCRPDAVMFGVNYLANVPEVIEF 80  Frankia
ZP_09865156   81 AKAAKDRLPESFVFIGGHSASFTADELLEHGEGKIDAVLRGEGESGVPLLLQALAEDRqNLHTVPGVTTLDGTGPQPSFV 160 Methylomicrobiu...
EDZ39867      81 VRETRRILDNALLFAGGHSASFVARDMLRHAGGAMDCVLRGEGEASVVSLLEAWSEGPgMISRVPGVVTSQGEGPPPRFI 160 Leptospirillum ...
ZP_08896775   81 CKETRRRLPNVFLFIGGHSISFIARDVLALSDGAINCVLKGEGDATVGLLLEAWEQGK-DLLTVPGVVTMEGDGPPPIFI 159 Gluconacetobact...
ZP_01128076   81 AKETKRDRPGVFIFAGGHSVSFVAEEVLEHADGAIDCIIRGEGEESAALLIEAARDGG--ALSVPGVVTREAAGPAPRLL 158 Nitrococcus mob...
ZP_06907528   81 AQDARRRLPGVFVFFGGHSVSFVAGDVLEQAEGAVDAVVRGEGETAIGPLLDAARDGG--LSSVPGAVTLEGRGPAPTML 158 Streptomyces pr...
WP_010960068  81 AKTAKSRLPECFTFVGGHSASFVAKDLLDHGEGLLDCVLRGEGEAGAPKLLETLARRG-NIDEVPGVVSLTGEGPPPGFT 159 Methylococcus c...
WP_012403467  81 SKSIKAQLPGCFMFVGGHSASFTARDMLRHADGALDCVLRGEGEAKVVELLAAVASKE-DLLRIPGVVTRDGEGPPPGFA 159 Burkholderia ph...
WP_015927516  81 AKSAKRDLPRCFVVIGGHSASFTAEELLEHGNGAVDCVLKGEGEAVLPQLLEAVAQDRaSVAQVPGAVTLDGAGPPPRFI 160 Methylobacteriu...
WP_013032298  81 AKETKGCLPQCFIFVGGHSASFTVRELLEHGEGSIDCILRGEGEASAAQLMDVVEQDReAITEVPGAVTLEGEGPAPVMV 160 Nitrosococcus h...
WP_015743833  81 AKETKRLLPACFVFVGGHSASFIPQELLDHAEGAIDCIVRGEGEPITPPLLEAIQDGG--LETLPGVVTARGVGPPPLML 158 Candidatus Meth...
WP_011436906  81 AHRAKRELPDCLVVAGGHSVSFIAEHLLKQCDGALDVVARGEGEVVAPRILEA--DRA-RLADVPGAVTADGAGPTPALL 157 Frankia
ZP_09865156  161 PGLNDLSPARDLLRQRRKYFLGMLDPCASIEFSRGCPWDCSFCSAWTFYGRSYRVMHPDKVVEELQKVREPGVFIVDDVA 240 Methylomicrobiu...
EDZ39867     161 ENLDDIQPARDLLRHRRKYFIGVLDPCASIEFARGCPWDCSFCSAWTFYGRSYRTRSPQRILEDLERIREPGIFIVDDVA 240 Leptospirillum ...
ZP_08896775  160 ESLDEVRPARDLLRHRRKYFIGTLDPAASIEFARGCPWDCTFCSAWTFYGRSYRTASAKVIGEELQEIKEPGIFIVDDVA 239 Gluconacetobact...
ZP_01128076  159 ENLSLHPPARDLCRKRRKYFIGHLDPCASIEFTRGCPWDCSFCSAWTFYGRSYRRLEPEAAAEDLASIKEPSAFIVDDVA 238 Nitrococcus mob...
ZP_06907528  159 HSIDSPRPARDLLRHRRRYFIGELDPCASIEFTRGCPWDCSFCSAWTFYGRSYRKASPQVAAEEMAGIRERNVFIVDDVA 238 Streptomyces pr...
WP_010960068 160 DNLDEHLPARDLLKYRRKYFLGTLDPCASIEFSRGCPWDCSFCSAWTFYGRSYRVMSTERIMEDLRRIKEPGIFIVDDVA 239 Methylococcus c...
WP_012403467 160 DSLDQIRPARDLLRHRRKYFIGVLDPCASIEFARGCPWDCTFCSAWTFYGRSYRSRSPEVVAEELASIREPGVFIVDDVA 239 Burkholderia ph...
WP_015927516 161 TSLDDSRPARDLLRHRRKYFIGMLDPCASVEFARGCPWDCTFCSAWTFYGRSYRAMSPERAVEEVAGIREPGIFLVDDVA 240 Methylobacteriu...
WP_013032298 161 PSLDEVRPARDLVRHRRKYFIGQLDPCASIEFSRGCPWDCNFCSAWTFYGRSYRTLSPEVAVEELERIKEPGIFIVDDVA 240 Nitrosococcus h...
WP_015743833 159 HDLDRTLPARDLARRRHKYFIGVLDPCASIEFTRGCPWDCSFCSAWTFYGRSYRKVSPEVVGEDLARIQEPNAFIVDDVA 238 Candidatus Meth...
WP_011436906 158 PGLDEPLPARHLLAHRRRYFIGELDPCASVEFTRGCPWDCSFCSAWTFYGRSYRRLSPDAAGEELSAIREPNVFIVDDVA 237 Frankia
ZP_09865156  241 FIQEKLGLEIGEAIARKGIKKEYYLETRGDVLLRNKDVFRFWKQLGMKYMFLGVEAIDEEGLEKYRKRISLSKNFEALEF 320 Methylomicrobiu...
EDZ39867     241 FVQEKHGYEIGEAVLKKGIRKEYYLETRGDVLLRNKDLFRFWKKLGMKYMFLGVEAIDAEGLALHRKRISLGKNFEALEF 320 Leptospirillum ...
ZP_08896775  240 FVHAEHGMAIADEIKRRNIQKEYYLETRADVLMRNKEVFAVWKEIGLSYIFIGLEAVDAEGLKRFRKRVSMDRNFEALEY 319 Gluconacetobact...
ZP_01128076  239 FIKADYGMDLADAVERRGVRKQYYLETRPNVLLRNREVFERWTRLGLQYMFLGLEALDEEGLRAFRKRATPDQNFEALEV 318 Nitrococcus mob...
ZP_06907528  239 FIRPEHGDGIAAELERRRIRKSYYLETRADVLLRNREIFERWSRLGLKYMFLGMEAIDAEGLDLYRKRISPDENFHALET 318 Streptomyces pr...
WP_010960068 240 FIQAQHGMEIGEAIAREGIRKQYYLETRGDVLLRNKEVFKLWKKLGMEYMFLGVEAIDAEGLQKFRKRVSLGKNFEALEF 319 Methylococcus c...
WP_012403467 240 FVHADHGMAIGREVERRGIHKKYYLETRGDVLLRNKEVFEYWRRLGLQYMFIGLEAIDAEGLKAFRKRVNLDKNFEALAF 319 Burkholderia ph...
WP_015927516 241 FVHEAHGLAIGEGLARRGVRKEYYLETRGDVLLRNKDVFRFWSKIGLKYMFIGLEAIDEEGLKRFRKRVGLDKNFEALEF 320 Methylobacteriu...
WP_013032298 241 FIQSKHGLEIGEAIARKGIKKKFYLETRGDVLLRNKDVFKFWRDLGVEYMFLGLEAIDEEGLRKFRKRVPFDKNMEALEC 320 Nitrosococcus h...
WP_015743833 239 FIHPEDGMAIGREIERRGIRKQYYLETRCDVLLRNQEVFAYWKRLGLRYMFLGLEALDAEGLKAIRKRATPSENFQALEV 318 Candidatus Meth...
WP_011436906 238 FIRPEHGMAIADQVERRGIRKRYYLETRSDVLLRHPEVFERWRRLGLEYMFLGMEALDADGLDLYHKRISPDENIRALEV 317 Frankia
ZP_09865156  321 ARSLDIMVAINIIADPDWDHRRFQTIREWCMEIPEIVNISINTPYPGTESWLTESRRLNTRDYRLFDIQHAVLPTQMPLE 400 Methylomicrobiu...
EDZ39867     321 ARSLGITVAINLIADPSWERERFESIRQWCLEIPEIVNISVNTPYPGTESWRTESRSLQTRDYRLFDIQHAVLPTKMPLE 400 Leptospirillum ...
ZP_08896775  320 ARSLDLIVAINLIADPSWDRERFEVIRQWCLEIPDIVNISVTTPYPGTEIWESESRKLTTRDYRLFDIQHAVMPTTLPLR 399 Gluconacetobact...
ZP_01128076  319 ARQLGIRVAINIIADPAWDVKRFEQLREWALSVPEIVHVTVQTPYPGTEIWHTESRKLTTLDYRLFDVQHAVLPTTLPLE 398 Nitrococcus mob...
ZP_06907528  319 ARKLGITVAINLIVDPAWDRERFRIVREFALSVPEIVHLTVMTPYPGTEIWHTEARKLTTRDYRLFDIQHAVVPTTLPLD 398 Streptomyces pr...
WP_010960068 320 ARSLGITVAINLIADPDWDRERFEVIRQWCMEIPEIVNISVNTPYPGTESWHTESRQLTTRDYRLFDIQHAVLPTRLPLP 399 Methylococcus c...
WP_012403467 320 ARSLGITVAINLIADPDWDRERFETIRQWCLDIPEIVNISVNTPYPGTEIWLREARQLTSLDYRLYDIQHAVLPTKLPLA 399 Burkholderia ph...
WP_015927516 321 ARSLGITVAINLIADPDWDRDRFETIRQWCLEIPEIVNISVNTPYPGTEIWRTETRPLQSLDYRLYDIQHAVLPTRLPLP 400 Methylobacteriu...
WP_013032298 321 ARSLGITVAINIIADPDWDRERFEVVRQWCLEVPEVVNISINTPYPGTEIWHTESHRLTTRDYRLFDIQHAVLPTRLPLE 400 Nitrosococcus h...
WP_015743833 319 ARKLGFTVALNIIADSGWDEERFRVIREWAAGVPEIVHVTVNTPYPGTETWYTESRKLTSLDYRLFDVQHAVLPTTLPLK 398 Candidatus Meth...
WP_011436906 318 ARKIGITVAVNLIADPDWDEKQFRLVREWALSVPEIVHLTVCTPYPGTEIWHTQSRRLTTLDYRLFDIQHAVVPTRLPLD 397 Frankia
ZP_09865156  401 EFYAELVKTQKVLFTKHMGWTAVRDALSTVAGQLVRGQTNFVRSMFKFDSVFNPQLQLADHRLPVQYRMAPPP-PSRQRV 479 Methylomicrobiu...
EDZ39867     401 EFYGELVKTQQILNKKHLGWQALKGTANIVARHLMHGQTNFLRMLWKFNSVYNPALQLADHARPVRYEMSLPP-PVKEHL 479 Leptospirillum ...
ZP_08896775  400 EFYEELVKTQQILNNKHLGWSAIKDTLGIALRLALRGQTNFLTMIWKFNSVFNPELQMADHAQKPEYEMPLKPeGTDQKV 479 Gluconacetobact...
ZP_01128076  399 RFYEELVKTQAVLNRRHLGWSALQTMAGVAANRLAHGQTNFVKMLWKFSSVYNSKRQLTDHQRPVRYQMRPPAeRST--P 476 Nitrococcus mob...
ZP_06907528  399 EFYRELVLTQSVINRKHLGLRTAFGAARILAANLARGQTNFARMLWRFNRVYNPARQMADHDRPVRFELPLP--RHVEVE 476 Streptomyces pr...
WP_010960068 400 EFYGELVKTQQVLYKKHMGWAAARDTLKILGGHLLRGQTNFLRSLWKFNSVFNPELQLADHRQPVKYPMTLPPaPTEQKI 479 Methylococcus c...
WP_012403467 400 EFYGELVRTQQVLNRKHLGWGALYRAAGEAASLLMRGQTNFVRMLWRFNSVFDPNLQLGDHAREVRYEMTPPPaQRPEQS 479 Burkholderia ph...
WP_015927516 401 EFYAELVRTQQVLNRKHLGWRVLAETAGISARHLLRGQTNFLRMLWKFNSVFDPRLQLADHAREVRYRMAPPPvQRVAKL 480 Methylobacteriu...
WP_013032298 401 EFYAELLKTQQVMNMKHVSWRTARHLTALVAQRLFRGQFNFLKMLWRFNKVYNLERLLADHGRPPKYELALPSaPGTA-V 479 Nitrosococcus h...
WP_015743833 399 RFYEELVKTQAVLNRKHLGWAAVRGTFSTASRLLMQGQTNFVRMLWKFSQVYNPDRQYGDHLKEVKYVLTPPPdKQPIKP 478 Candidatus Meth...
WP_011436906 398 RFYRELVATQAVLNRKHLGAKALAATARIVAANLARGQTNFPRMLWKFPRVYNAGRLYAEHQHPARYRL-PEPvPAAMTP 476 Frankia
ZP_09865156  480 DAKSIYIHQPL 490 Methylomicrobium album BG8
EDZ39867     480 HPVTLYVHEGK 490 Leptospirillum sp. Group II '5-way CG'
ZP_08896775  480 DRKTLYVHGPA 490 Gluconacetobacter oboediens 174Bp2
ZP_01128076  477 QQKVLFVHPPT 487 Nitrococcus mobilis Nb-231
ZP_06907528  477 DRRQLYIHAKP 487 Streptomyces pristinaespiralis ATCC 25486
WP_010960068 480 EAKTLYVHRSQ 490 Methylococcus capsulatus
WP_012403467 480 NVKVLYVHGPT 490 Burkholderia phymatum
WP_015927516 481 DPKALYIHPPL 491 Methylobacterium nodulans
WP_013032298 480 DPKTLYVHRVQ 490 Nitrosococcus halophilus
WP_015743833 479 TPAKLFVHAQA 489 Candidatus Methylomirabilis oxyfera
WP_011436906 477 RRRELYVHQPA 487 Frankia
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