Conserved Protein Domain Family
MFS_SLC18B1

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cd17385: MFS_SLC18B1 
Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters
Solute carrier family 18 member B1 (SLC18B1) is the fourth member of the SLC18 transporter family, which includes vesicular monoamine transporters and vesicular acetylcholine transporter. It is predominantly expressed in the hippocampus and is associated with vesicles in astrocytes. It actively transports spermine and spermidine by exchange of H(+), and has been suggested to be a vesicular polyamine transporter (VPAT). SLC18B1 belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 340943
Aligned: 17 rows
Threshold Bit Score: 499.437
Created: 3-Feb-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ##  ##  #                               #                             
Q6NT16        37 LISAASVNLGSMMCYSILGPFFPKEAekkgASNTIIGMIFGCFALFELLASLVFGNYLVHIGaKFMFVAGMFVSGGVTIL 116 human
Q8MPU6        87 ISMLSLANLCSTIAFSCIAPFYPAEAklknLSETQTGIVFGIFEFTMFIISPLFGKYIIFIGaRTMFIVGIAVTGVTAIL 166 Caenorhabditis ...
XP_013381874 246 VLTFALANLGATCCFSLLAPFFPDEAakkgSTKTTTGLIFGCFELVIFISSPIFGALLTRIGsRFMYCAGIMVAGCCAIL 325 Lingula anatina
XP_013093932 117 LFMLAVANFGAGCAYSLPAPFFPREAakkgVSSTVIGLVFSCFQLVIVVTSPFFGNFITHIGaKFTYVSGIMTAGVCAIL 196 Biomphalaria gl...
KOX75427      13 LIVISLADFANAICVSLQAPFYPQEAekkgASPSEYGLVFGIFEFIVFIISPLYGQYLHRIGpKLLFNGGIMTTGTCAIF 92  Melipona quadri...
XP_002732493  54 LFSISLANFSDFVSYSILAPFFPEEAnkmgMSDSVVGLVFGCFALVMFITSPVFGKFLTKIGvKFMFIAGSFTCGVCCII 133 Saccoglossus ko...
XP_019635549  68 LVALATMNFAACTCYAIPAPFFPGEAqsrgVSDTAVGLVFGTYAFFCMVTGPIYGKYINLIGaKFMLIAGMFVSGSCSVL 147 Belcher's lancelet
XP_003724999  82 FAGIAAMYLTSMMSFSVLAPFFPYEAekkgVTPAETGLVFGIFSLTSFLVSPICGKYLPVIGaKFMYLSGCFVGAGCNLL 161 purple sea urchin
EFX79124      17 AFVIAFADFCSAVCISLQAPFYPAEAerkgATASQYGFVFGCYELTVFLTSPLFGKYLAKLIpKFMLNGGLVVTGVCSIL 96  common water flea
XP_013774743  76 LLLLSVSNLVIAACISLQAPFFPREAeekgASPTIYGFVFGVYELGVFISSPIYGKIISWITpKFLVNAGLFVAGTTTIL 155 Atlantic horses...
Feature 1                                   ## ###  #                  #  ##  #                  
Q6NT16       117 FGvldrvpdgpvfiamCFLVRVMDAVSFAAAMTASSSILAKAFPnnvatvlGSLETFSGLGLILGPPVGGFLYQsfgyEV 196 human
Q8MPU6       167 FGflnflpsgntffwfSVLVRILEAVGDAAFVTSSFAIAAKSFPknvafvvGILETFAGLGYTAGPVIGGFFYDiggfQL 246 Caenorhabditis ...
XP_013381874 326 FGfldgsppgsvyvgmCFAVRIVEALGCSLYIVASWAIIAHTFPnevsmlmGTLETFSGIGMMAGPALGGALYSlggfRL 405 Lingula anatina
XP_013093932 197 FGfldqgpsgtpfiamSFIVRTVEGIGVAAFSTASFAIVSNEFPnhigsvfATLETCIGIGLMIGPTIGGALYEfggfGM 276 Biomphalaria gl...
KOX75427      93 FGlldrvnghypfivlSFLIRIVEAMGNAAFLTASFAIIAKEFPdnvattfASLETFFGLGLIVGPTVGGALYQvggyIT 172 Melipona quadri...
XP_002732493 134 YGflirldkgtefivfCFVVRSIEAVGSAASATAAFAIIAKTFPeniattlGVLEIFSGLGFMLGPLIGGYLYQvggfTL 213 Saccoglossus ko...
XP_019635549 148 FGmldymeg-tvflafCFLIRGMEAVGVSACYTASFAIMAKEFPdnvatvlGTLEIFTGAGMMIGPPVGGALYSlggyKV 226 Belcher's lancelet
XP_003724999 162 FGfldeiqgktmflayCFTIRIVEALGSSAAITAGMSICANVFPdniaqmsGMLELFSGLGFAAGPPLGSLLYGiggyKL 241 purple sea urchin
EFX79124      97 FGvldkiddttafiglSFAVRVIEALGSAAFLTAAFAIIAAEFPssiattfACLETFFGLGLIVGPTLGGFLFQmggyML 176 common water flea
XP_013774743 156 FGfldhsppgtpfivlAILVRLVEGFGAAAFVTASYTYAAAEFPgrvasafATIETFFGLGLLLGPTIGGALYQaggyPL 235 Atlantic horses...
Feature 1                                                           #  ##  ###  #                
Q6NT16       197 PFIVLGCVVLLMVPLNMYILPnyesdpgeh----sfwklialPKVGLIAFVINSLSSCFGFLDPTLSLFVlekf---nlp 269 human
Q8MPU6       247 PFLVLGIVLLVASVLAFFLIEntkddesnpe-dkgmleilrlPQIWLPIFSVVSCAISLSFLDPTLSNHLesf----klt 321 Caenorhabditis ...
XP_013381874 406 PFFVMGSLVILIGLMSAALLPpqddapter---knmlqlfkaPSIILSLILITVAAFGLGYMDPTLSQHLekldpslkdk 482 Lingula anatina
XP_013093932 277 PFWVIGVIICSSGLTILTCLPqpqdtvkqkn--gsifsllrsVIVWVSSLSIFAGACGISYLDPTLSDHLdqf----gls 350 Biomphalaria gl...
KOX75427     173 PFVVLGSALFTTAVMTIFILPvhpndneaahntvgmtkalriPGVLIATSSIIATSMSIGFLQATLEPHLrqf----kls 248 Melipona quadri...
XP_002732493 214 PFLVLGIFTIVITLCNIYILPrqqdegtlks--gsmteflkiPSVIMTSLCVLAGSVALSFLDPTLAKHLnqf----nfn 287 Saccoglossus ko...
XP_019635549 227 PFLVVGGFMLICAVFMPFILPtqldrddvteetaslvallkiPSTYVSSLAIVTCAAVYAFLEPTLQPYLnlkf---dmt 303 Belcher's lancelet
XP_003724999 242 PFLALGCTAMVISVIDIFILPslppasrkek-pgsiltvlkiPAVLIVLAACVWGSACLGFSDPTLSLHLtspp--lnvh 318 purple sea urchin
EFX79124     177 PFTVLGVLLIAAALFTYALLPaaehcdspq---sglfrilriPSILLASFSVFAASTSVGFLSATLEPHLrqf----dlm 249 common water flea
XP_013774743 236 PFVVLGATQLFVEVCSIFILPrpdrnekpks--gnmfkfladTGVLLDGLLITTTLVFLGYNSATLEPHLrqf----dlq 309 Atlantic horses...
Feature 1                      #   #                                                             
Q6NT16       270 AGYVGLVFLGMALSYAISSPLFGLLSDkrppLRKWLLVFGNLITAGCYMLLGPVPilhi-----ksqlWLLVLILVVSGL 344 human
Q8MPU6       322 PTEIGLMFLLCGGFYTVMCPVFGAIMDrl-hNGENLLLFGSIATLLSMFFIGPTPllngy---vekdlWVIGISLAVLGL 397 Caenorhabditis ...
XP_013381874 483 YWLIGIMFLIAPGMYAFTAPLWGYLADkt-kRTKTMMIIGMIVGGTGFILMGPWQpiqnlfpnqkaplWIAIVGLTVMGL 561 Lingula anatina
XP_013093932 351 TLLVGLFFIIGPGLHAILAPVWGYISDrk-dIQSPLLVLGNLVCTIGFLFVGPSPllpfl----prelWVVTVGLILFGL 425 Biomphalaria gl...
KOX75427     249 PIVLGLMFVINGGTYAITAPAWGWLCDkh-sHPKVATVAGCVLVVVGFCLVGPAPfipc-----sttlWMTVCGLVVHGL 322 Melipona quadri...
XP_002732493 288 STTVGLMFLIMAGSYTLSAFFWGWITDkk-nIPKLLMIIGNIGCGAAYLYLGPTPlfnv-----ktelWMVIFSLVLLGL 361 Saccoglossus ko...
XP_019635549 304 EAQVGLIFLLSVGLYTLSAPLWGWLTDrg-lFPRLTMVLGLLFTAASYLLIGPSPllegif-vtgdalWMVLVGLGLSGV 381 Belcher's lancelet
XP_003724999 319 PSMVGVMFLLIGGMYALFAPIWGYIADkk-kMTRIMMVLGFYIIGISFMLIGPSPlldl-----pgklWIIMISLALLGF 392 purple sea urchin
EFX79124     250 PVSMGLMFVIEGGIYAITAPVWGYLCDrk-vQPKIVTLIGSIFIVVGFLLIGPAPflpl-----dttlNLAITGLVIMGF 323 common water flea
XP_013774743 310 PVVLGTIFMITATIYVITTPVWGWLCDrg-fDPKLLAVIGGVMCIVSLILIGPAPflpf-----taelWMVSISLVLCGI 383 Atlantic horses...
Feature 1        ##   #   #                       #  ##  ##  #                                   
Q6NT16       345 SAGMSIIPTFPEILScahengf-eeglstLGLVSGLFSAMWSIGAFMGPTLGGFlyEKIGFEWAAAIQGLWALISGLAMG 423 human
Q8MPU6       398 AASALYIPCFQMCLDevkdkgf-ddnfhtYGCVSGIFQAAFGFGSFIGPTFGSVvvERVGFRWTTTMIAFLHIILSTVVL 476 Caenorhabditis ...
XP_013381874 562 GVGGALIPVFTDLFEeasylgf-petfetQGMISGITSSAFSLGAFLGPTIGGLltERLPFEMAAAIVGGCSFTVALLYL 640 Lingula anatina
XP_013093932 426 TIGCSIVPTMKCLVLgarelgf-pdnlstFGMVSGLFNAAFCFGAFVGPTIGGAliEKIGFAYGSTIIASFFFVVMIVTS 504 Biomphalaria gl...
KOX75427     323 GMAAQLVASFTDALRtsiqygf-snnletYGLISGLWTSTFALGAFIGPSVAGIllDNIGFRNATMFIVLLHMLVGVMAA 401 Melipona quadri...
XP_002732493 362 AVGCALVPTFTDMIGtarwygm-qdnfvtYGIVSGVFNGLFSLGSFIGPTVGGAmeQAYGFSWAASVMALIYFTVTTLLI 440 Saccoglossus ko...
XP_019635549 382 SLGAALVPTFSELLIsareagleedslatYGLVSGVYNCMYSLGEFIGPTLGGFldDQYQFPIASTATAGFGGVVVIGMS 461 Belcher's lancelet
XP_003724999 393 SIGIGIMPAFLDLLIsakwygl-pedlstQAILSGLFNGAFSLGTFVGPTLGGAlvNQLGFDWSSTIFAGGCFVVVIVMS 471 purple sea urchin
EFX79124     324 GVGAELVSGFISALQeatfhgf-pnnlstYGLVSGLWTSTFALGAFVGPSLAGIlfDQVGFRYSTLFVITTNALLRRLSP 402 common water flea
XP_013774743 384 GLAAKFVCAFISALNdalkrgf-pddmstHGLVSALCTICMSIGAFIGPTIGGYllEHLGYRQSTFILLIMEVSLMILLT 462 Atlantic horses...
Feature 1           
Q6NT16       424 LFY 426 human
Q8MPU6       477 LGI 479 Caenorhabditis elegans
XP_013381874 641 VYI 643 Lingula anatina
XP_013093932 505 VYF 507 Biomphalaria glabrata
KOX75427     402 VFL 404 Melipona quadrifasciata
XP_002732493 441 IFC 443 Saccoglossus kowalevskii
XP_019635549 462 FFY 464 Belcher's lancelet
XP_003724999 472 LFG 474 purple sea urchin
EFX79124     403 GIL 405 common water flea
XP_013774743 463 LYM 465 Atlantic horseshoe crab

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