4ONZ,5A7V,3QC2,3R67,3TAW


Conserved Protein Domain Family
GH130_BT3780-like

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cd18610: GH130_BT3780-like 
Click on image for an interactive view with Cn3D
Glycosyl hydrolase family 130, such as beta-mammosidase BT3780 and BACOVA_03624
This subfamily contains glycosyl hydrolase family 130, as classified by the carbohydrate-active enzymes database (CAZY), and includes Bacteroides enzymes, BT3780 and BACOVA_03624. Members of this family possess 5-bladed beta-propeller domains similar to families 32, 43, 62, 68, 117 (GH32, GH43, GH62, GH68, GH117). GH130 enzymes are involved in the bacterial utilization of mannans or N-linked glycans. GH130 enzymes have also been shown to target beta-1,2- and beta-1,4-mannosidic linkages where these phosphorylases mediate bond cleavage by a single displacement reaction in which phosphate functions as the catalytic nucleophile. However, some lack the conserved basic residues that bind the phosphate nucleophile, as observed for the Bacteroides enzymes, BT3780 and BACOVA_03624, which are indeed beta-mannosidases that hydrolyze beta-1,2-mannosidic linkages through an inverting mechanism.
Statistics
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PSSM-Id: 350122
Aligned: 54 rows
Threshold Bit Score: 327.618
Created: 9-Dec-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitechemical
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: active site [active site], 4 residue positions
Conserved feature residue pattern:N D Y DClick to see conserved feature residue pattern help
Evidence:
  • Comment:conservative active-site residues (invariant sites among close relatives of 4-O-beta-D-mannosyl-D-glucose phosphorylase/MGP)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #                                                               
4ONZ_A     37 CPXRKQQVKWEESDTFNPAATVKDGKIVVLYRAEDNSaqgigkrTSRVGYAESKDGIEXKRLDNPVLFPAEDnfkdqdWP 116 Bacteroides ovatus...
5A7V_A     62 CPMTQDYVAWESNDTFNPAATLHDGKIVVLYRAEDKSgvgighrTSRLGYATSSDGIHFKREKTPVFYPDNDtqkkleWP 141 Bacteroides thetai...
SEP02544   55 ILRPDPAHAWESAYLYNPCAIVVGNRVALFYRAQDAAk------TSSIGLAFSDDGITFTRLPDPVLTPSEPw----eLP 124 Amycolatopsis saal...
KRF47151   20 PILAPQGDSWESGSVYNPAAVVVDDRVALLYRAHADDi------VSHVGLAWSDDGYRFEREPEPVLSPSEDy-----DR 88  Terrabacter sp. So...
KIW35654   63 ILRPNPAANWESAYLYNPTAIVLNETVFLLYRAQNASk------TSSIGLAWSADGVTFTRLDRPVVSATEPw----eHR 132 Cladophialophora i...
EDK37520   36 ILVPDPEHEFEESYIYNAAAIVVDDKVFLLYRAQNRTk------VSSVGIAWSDDGYNFVRYHKPVLYPTEPw----eQN 105 Pichia guilliermon...
ACQ80522   19 PILRPRGGSWESANLYNPAALVDGDEVLLLYRAHAEDi------VSHIGLARSGDGYHFERDAEPILSPAEDy-----ER 87  Beutenbergia caver...
KFY03859   44 LLVPNPENDFESAYIYNAAAIVLDDIVYLLYRAQNAAk------VSFIGLAWSADGLNFTRLDHPVLEPTEAw----eAG 113 Pseudogymnoascus p...
OZJ02914   46 IISPDPSHTWEDAYTYNPSAWVQNDEVYMIYRAQDSQk------VSSFGLATSKDGYHFNRLPDPIFTPQGSv-----ES 114 Bifiguratus adelaidae
CRG82940   69 ILGANENRGWESSFVYNPTAMVIDDMVILLYRAQNSSl------ISTIGLAWSTDGYNFTRYTEPIFYPTETy-----EN 137 Talaromyces island...
Feature 1         #                                                                           
4ONZ_A    117 GGCEDPRVAXTe-DGLYVXLYTAWNRKk-ARLAVATSRDLkNWTKHGLAFDkayng-----------rfnnlFCKSGSIL 183 Bacteroides ovatus...
5A7V_A    142 GGCEDPRIAVTa-EGLYVMTYTQWNRHi-PRLAIATSRNLkDWTKHGPAFAkaydg-----------kffnlGCKSGSIL 208 Bacteroides thetai...
SEP02544  125 GGCEDPRVVRV--GDTYYMTYTGYDHTs-ALLCLATSKDLrNWTKHPPLFPdlrdpg----------hgakpWNKSGTIA 191 Amycolatopsis saal...
KRF47151   89 FGCEDPRVIAI--DGTYYLTYSGWDRTq-SLLCLATSTDLrTWTKHGPLFPdfdtfqpq------grgetgpWSKAGGIV 159 Terrabacter sp. So...
KIW35654  133 GGTEDPRVVRV--NGTFYLTYTAYDGVt-PRLCLATSTDLlHWTKYPPLFPgyrdvaysd---vdapsprtdYSKSGAIV 206 Cladophialophora i...
EDK37520  106 GGCEDPRVVRDpeTKKFIMTYTAYDGAt-ARLCVATSNDLfHWKKYPPIINsdsswqdiavtstghriirdaWSKSGAIF 184 Pichia guilliermon...
ACQ80522   88 YGCEDPRIAVV--DGTYYLTYTGWDRRs-AQLCLATSTDLrTWTRHGPLFPdfdtfat-------vdprgfgWSKAGVIV 157 Beutenbergia caver...
KFY03859  114 GGVEDPRITRV--DGTFYMTYTAYDLHk-PRLCLATSTDLvNWKKYPPMFTdwadieiel---dgshsirrdHSKAGAIF 187 Pseudogymnoascus p...
OZJ02914  115 HGVEDPRVVLV--NGTYYMTYTAYNGTv-AQLCLATSTDIhNWQRYGPMFPgfnvrst--------dgsgteWSKSGAIL 183 Bifiguratus adelaidae
CRG82940  138 KGTEDPRLIRV--NGTFYLTYTGWSDSdgVKLCQAISTDLlNWNKTGPVLPdi------------------tESKSGAIL 197 Talaromyces island...
Feature 1                                                                                     
4ONZ_A    184 TKlkgnqlvidKVNGKYFXYWGEHaIYAATSDNLIDWYPVldek-----nelXKIIQPRkghf--dsllTECGPPAIRT- 255 Bacteroides ovatus...
5A7V_A    209 TEvvngkqvikKIDGKYFMYWGEEhVFAATSEDLVNWTPYvntd-----gslRKLFSPRdghf--dsqlTECGPPAIYT- 280 Bacteroides thetai...
SEP02544  192 AT---------PMQGWYWMYFGESnIFWARSKDLITWETPgndd-----pvaRPVFPWEgs-------lIEPGPPPVAGp 250 Amycolatopsis saal...
KRF47151  160 PA---------KVNGRWLMYFGEGsIWTATSDDLLTWTPTvsd-------tePPVMAPRpgtf--sdflVEVGPQPLITd 221 Terrabacter sp. So...
KIW35654  207 REp--------TADGLYHMYFGDSfFYHATSRDLLNWTALpsd------qyfASPVNPWen------rlIEPGPPPVKTr 266 Cladophialophora i...
EDK37520  185 TEr--------NKDGKYYMIWGDSaFHLAESCDLAHWNLTstsygnntfttgKYVWQNKl---------IEPGPAPIKLd 247 Pichia guilliermon...
ACQ80522  158 PV---------RMQGRWWMYFGEGaLYWATSDDLIHWTPGtp--------dtEPMYSPTpgsf--dadlVEIGTSPVLTd 218 Beutenbergia caver...
KFY03859  188 AEk--------NEAGKYTMIWGDSfLQLAESDDLINWNPLpfnqh---fatgVHQWENRl---------LEPGPAPIKTs 247 Pseudogymnoascus p...
OZJ02914  184 PWk--------QPNGQYLIYFGEVnIWYAYSPDLVHWGTP------------TLFFSNSgvagqfdsdlVEAGPPPIQT- 242 Bifiguratus adelaidae
CRG82940  198 DEr--------QSDGNYHMHWGDIeIYLAVSQDLVHWTMPtnd-------syATGLLEWeq------klIESGPPPVKTr 256 Talaromyces island...
Feature 1                                 #                                                   
4ONZ_A    256 ---KHGIVLVYNGKNsgktgdanypGNAYCAGQLLLDg-----------------NDPYKVLDRLDKPFFAPEAPFEksg 315 Bacteroides ovatus...
5A7V_A    281 ---PKGIVLLYNGKNsasrgdkrytANVYAAGQALFDa-----------------NDPTRFITRLDEPFFRPMDSFEksg 340 Bacteroides thetai...
SEP02544  251 ---GGHLVLAYNGRSdgng---gypKGQYSGGQLLIDp-----------------ADPTKAVARLERPFIYPTADDEqng 307 Amycolatopsis saal...
KRF47151  222 ---DGLILLLHNAAVkna-----dgSVRYTAGQLLIHp-----------------DRPDEILAELTRPWLEPVTREErqg 276 Terrabacter sp. So...
KIW35654  267 ---DGKWLLIYNGMTtgrv---gypQNQYSVGQMLLDpsgsfrptlnvsdgvyqpALTDGPVARLERPILVPEADNEqkg 340 Cladophialophora i...
EDK37520  248 ipgKNWWVLFYNSATtgga---eyaKDTYAISQMLVDy----------------dNLGAGPLARMDSPILVPDAANEieg 308 Pichia guilliermon...
ACQ80522  219 ---NGLLVMLTNGATrtvhp-agsvDVDYRCGQIAIDp-----------------DDPTRVLARLQVPWLRPQTAEDlhg 277 Beutenbergia caver...
KFY03859  248 ---DGKWILVYNAATtggs---gfaSNQYSISQMLVDy----------------kNIRAGPLARLEWPSLLVEAENEhkg 305 Pseudogymnoascus p...
OZJ02914  243 ---SQGVLFVFNGAQig------tnYKNYSVGELLVDa-----------------NDNTRILQRTIQAVMTPTTPEEaga 296 Bifiguratus adelaidae
CRG82940  257 ---DGKWLKVYNGVAdkdidngkyvEGQYSTGQMLIDpd---------------lFPYGPPVARLETPILTPDTADEkqg 318 Talaromyces island...
Feature 1                                #        
4ONZ_A    316 -qykDGTVFIEGLVYHKKKLYLYYGCADSQVAVAVC 350 Bacteroides ovatus ATCC 8483
5A7V_A    341 -qyvDGTVFIEGMVYYKDKWYLYYGCADSKVGMAIY 375 Bacteroides thetaiotaomicron
SEP02544  308 --qvNHVTFSEGLVRFHDRWFLYYGMADSVLGVATA 341 Amycolatopsis saalfeldensis
KRF47151  277 --lvSNVTFVEGLVWLRDRWLAYYGQSDSTLGVATF 310 Terrabacter sp. Soil810
KIW35654  341 --qvDQVVFAEGLVQFKGKWFLYFGQGDSELGVAIA 374 Cladophialophora immunda
EDK37520  309 --qvNRVVFTEGLVQFKNKWFLYFGQGDSELGVATA 342 Pichia guilliermondii ATCC 6260
ACQ80522  278 --lvSNVTFVEGLVSFRGKWFAYYGQADTTLAVAVH 311 Beutenbergia cavernae DSM 12333
KFY03859  306 --qvNEVVFCEGMVQFKGQWLLYYGQGDSELGVAVA 339 Pseudogymnoascus pannorum VKM F-3808
OZJ02914  297 nvqtPNVTFAEGLVYLKNKALLYYGQGDQTIGVATG 332 Bifiguratus adelaidae
CRG82940  319 --qvANVLFSEALVQFKGQWLMYFGEADTYLGVASA 352 Talaromyces islandicus

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