7AFI,1IB8,5GL6


Conserved Protein Domain Family
RimP

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COG0779: RimP 
Ribosome maturation factor RimP [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 440542
Aligned: 865 rows
Threshold Bit Score: 51.275
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7AFI_X         1 M----------------St--------------L-----EQKLTEMITAPVEALGFELVGIEFIR-GRTSTLRIYI-D-- 41 
WP_002817836   1 Mn--------------lKq--------------I------DTIKEKIQPILSEKHLLLWDLSFFG-GSPAVLTILI-D-- 42 
WP_013103951   1 Man-----------------------------kV-----EQKITVLITPIVEKRDKLLWDLSYTReGGQKVLRILL-D-- 43 
WP_013989751   1 M----------------Se--------------I-----IEKVRNVIEPVLDEQGYMLWAIEYDRmDDDMVLRALV-D-- 42 
WP_016339187   1 Md------------------------------eLlk--hQSVIKAAMEEYLQQNNLMLFSLNSLVeFDTNILQVLVeD-- 46 
WP_023025664   1 Mkn-------------fAs--------------I-----KDEIQKIAESILKEYNLQIYEINNFFdFESDVLQILV-Edi 47 
WP_025734334   1 Men-------------fTs--------------F-----KNQIEDLANKILNQHNLRVYEINNFQdFESDVIQILV-Edq 47 
WP_106720550   1 Mn-------------------------------I------QKMKEKLIPILKRYDLDIYSIRTKKeFGEKIVEILI-D-- 40 
WP_108673527   1 MlqayhftrrivyyrhlAfsliiiykckmqynaIfklrsEEIIFNILSAALLSMNYEIVRIRI---GNNTHVEILV-E-- 74 
WP_118990944   1 Md------------------------------dV-----LQRYCDIICPIVEAHQAKVYDIATKRlGRTLHLQVRV-D-- 42 
7AFI_X        42 -SE-D--G--INVDDCADVSHQVSAVLD--VE--DP--I--------TVAYNLEVSSPGLDRPLFTAEHYA--RFVGEEV 99 
WP_002817836  43 -GQ-DhqA--IRMNQISEVTSLISDALD--KVepDP--F--------PDRYNLDISSPGIDRSIKTDEHLD--WALGQPI 104
WP_013103951  44 -KP-NheS--ITMTDLTDFTQEVNELLD--TTdpDP--I--------PEPYLLDISSPGADRPLIKPWHFKwaQESEEEV 107
WP_013989751  43 -RK-S--Gs-INMDDLVHLTEIIGELVDtiQP--DP--F--------PDAYMLDVSSPGAERKLVQLRDYE--WALNQKI 103
WP_016339187  47 -QA-A--V--IDLDRLVKISEDINQIID--HL--DL--I--------QTEYVVEVSTPGAERPLRNFEELA--GRLNEEV 104
WP_023025664  48 aEPnK--A--LDFDSIISSNEKLSDALE--NF--SG--L--------SEPYMLEVASAGIEKPIRNKDELI--KAVNSYI 107
WP_025734334  48 tQPnK--P--LSFDILLLVNEDLSTMMD--DI--KG--I--------DNQYLLEVASAGIEKPIRNEKELV--QAIDQYV 107
WP_106720550  41 -VDv------MDINELEKIHMEYVNLLT--DE--D---L--------DDDYYLELSSLGAERPLKTKEEVE--KAIGKYI 96 
WP_108673527  75 -RV-T--GeaISIDETAEIARYIKPLLY--QG--NA--IllheqnfsPANYSYDVSSCGVEKPLTREKDLL--RAIGKRV 142
WP_118990944  43 -KP-G--R--ITLDECVAINEAISQRID--EL--KAgwF--------GEPFVLDVSSPGAERELTSPEAIQ--EVIGEYV 102
7AFI_X       100 TLVLRMAV-Q-N---RRKWQGVIKAVD--GEMITVTV--E-G--KDEV--FALSNIQKANL-VPHF 150
WP_002817836 105 KLNLFEKI-D-G---SKSAEGILKSFS--DLEISLEV--S-P--AEVKn-FPREKISKISL-NQEA 156
WP_013103951 108 LISLFVAK-N-G---QKKWQGNISSLT--DDGLVLAT--E-A--DELV--LNFDEIAKAVL-NIQF 158
WP_013989751 104 VLTLKQQA-A-N---DDDLIGELIEIQ--NDGVVIKQtiK-N--KNIStpVAWTEIKGAKL-ALVQ 158
WP_016339187 105 LVEFITNV-D-K---LPLITGQLVAVDlpTQTLTIKYf-KkGqpKKLS--FRYDNVKFARC-AVKF 161
WP_023025664 108 HVQLNQEK-N-T---SSEIEGILLDFDvnKDTFRITYfl-kGqkKKVD--FKYEQVKFARY-AVKF 164
WP_025734334 108 HIEFHQMI-N-K---IKSLDGTIISYDekDKTFKIAFfv-kGqkKQID--FTWELIQQVRY-AVKF 164
WP_106720550  97 YLETNKY--K-G-------NGYIISFE--NDIIKLEIn-DkGriRKID--IDFNDARHMRT-SVKV 146
WP_108673527 143 SVKLYRSIiDqNrskLKKLEGELLKLT--DTAITIQY--N-S--AEIN--VPFDNISDIILvYIPW 199
WP_118990944 103 HLDYFGHQ-H-G---ETYHEGVLVDVL--DEVYILTYn-DrGrfRQLR--IQKDQVRKIRL-AVKL 157
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