Conserved Protein Domain Family
ndhA

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CHL00032: ndhA 
NADH dehydrogenase subunit 1
Statistics
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PSSM-Id: 214341
Aligned: 112 rows
Threshold Bit Score: 578.443
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
108773218   1 MISS------YNMSSLVRLKfnAIKlvidfgiseNIAYLISIFLPIVLLLVISVLGVLVTVWLERKISAAVQQRIGPEYA 74 
11466757    1 MISNinl-edKFFSFFFTLG--FSK---------EFFNFLWIIFSILILMLGVTIGVLVLVWLERKISAAIQQRIGPEYA 68 
34501456    1 MGFNtnl-keQVITFFSALS--LSK---------DFFNFIWIAFSILILLLTITIGVLVLVWLERKISAGIQQRIGPEYA 68 
28202229    1 MVFNmnl-keQAMSLFYESG--FPK---------DFFSFLWITASILILVSGVVIGVLVIVWLERKISAGIQQRIGPEYA 68 
18860374    1 MIIFmkdfeeQVMNLVNLLG--ISK---------DLFFILWTVLSILTLLLGVTMGVLVIVWLERKISAGMQQRMGPEYT 69 
49574629    1 MINStefcrnklIHLFDELE--ITM---------NLSKSIWIFASTLLLVLGVTMGVLVIVWLERKVSAGVQQRIGPEYA 69 
301353345   1 MITDieiwgkqlVHLFNELE--VTT---------TSFKSIWILASTLILVLGVTTGVSVIAWLERKVSAGVQQRIGPEYA 69 
60117228    1 MVINknl-eeQVIDLFYKLG--FPK---------DLFGFIWIITPILTYTLGVTIGISVIVWLERKISAGVQQRIGPEHA 68 
108796686   2 SSFDlk---qRAVEWFSNLG--IPT---------QIATFVWICVPIVVLILGITLGVLVLVWLERKISAAVQQRIGPEYA 67 
22711910    2 DLNE------KIINILSSVG--LTK---------NLSIFILDLIPILIILLGATLGVLVIVWLERKISAAVQQRIGPEYA 64 
108773218  75 GSLGIMQAIVDGVKLLIKEDIIPAQGDRWLFSIGPVLVVTPVILSYLVVPFGKNIILSDIRLGIFFWIVISSITPLGLLI 154
11466757   69 GPLGIIQALADGIKLFLKEDIVPAQGDVWLFNIGPILVLIPVFLSYLVIPFEYNVILANFSIGVFFWIAVSSVVPLGLLM 148
34501456   69 GPLGIIQALADGFKLLLKEDIIPSKGDNWLFNIGPAIVVIPVFLSYLVIPFGHNIILADLNIGVFFWIAISSIVPLGLLM 148
28202229   69 GPLGIIQALADGTKLLLKEDIIPSRGDALLFSIGPAIVVIPVLLSYLVIPFGHNIILADLNIGVFFWIAVSSIAPLGLFM 148
18860374   70 GPLGILQTLMDGIKLLLKEDIVPAKGNTWLFNLGPAIVVIPVFLSYLVIPFGQKMILSDLGIGVFFWIAVSSIVPLGLLM 149
49574629   70 GPLGIIQSLADGIKLLLKEDIIPAKGNAWLFAAGPAVVVTPVFITYLVIPFGQHIILSDLGIGVFFWIAISSIVPLGLLV 149
301353345  70 GPLGVIQSLADGIKLLLKEDVIPAKGDFWLFAIGPAVVVAPIFLSYLIIPFSKHVILSDPGIGAFFWVAISSIVPLGLLM 149
60117228   69 GPLGIIQALADGAKLLSKEDIIPSRGDSFLFNVGPVMVVVPVFLSYLVIPLGHGIILADLDIGVFFWIAVSSVAPLGLLT 148
108796686  68 GPLGTIQALADGLKLILKEDIIPSRADKWLFALGPAIVVIPVLLSFLVIPFNHQLIVADISIGMFFWIAVSSVAPVGLLV 147
22711910   65 GPLGMIQALADGLKLVLKEDIIPAKGDPWLFSVGPALVVVPVFLSYLVVPFGHELILANLGVGILFWIALSSIAPLGLLM 144
108773218 155 AGYASNNKYSLLGGLRAAAQSISYEIPLTLCVLSISL-LSNTLSTSDIVEQQCKYGILSWNIWRQPVGFITFFIASLAEC 233
11466757  149 AGYGSNNKYSFLGGLRAAAQSISYEIPLALSVLSIAL-LSNSLSTVDIVEAQSKYGFLSWNLWRQPIGFIVFFIASLAEC 227
34501456  149 AGYGSNNKYSFLGGLRAAAQSISYEIPLALCVLSISLqLSNSLSTVDIVEAQAKYGFWGWNVWRQPIGFLAFFIASLAEC 228
28202229  149 AGYGSNNKYSFLGGLRAVAQAISYEIPLALCVLSISL-LSNSLSTVDIVEIQSKFGFWGWNVWRQPIGFIAFLIASLAEC 227
18860374  150 TGYGSNNKYSFLGGLRAAAQSISYEIPLALCVLSISL-LSNSLSTVDIVEAQSKYGILGWNLWRQPVGFIVFIVSSLAEC 228
49574629  150 AGYGSNNKYSFLGGLRAAAQSISYEIPLALCVLSISL-LSGSLSTVDIVETQSKYGFWGWNLWRQPIGFIAFFISSLAEC 228
301353345 150 AGYGSNNKYSFLGGLRAAAQSISYEIPLALCILSASP-RSGSLSTVDIVETQSKYGFFGWNLWRQPIGFIAFFISSLAEC 228
60117228  149 AGYGSNNKYSSLGGLRAAAQSISYEIPLALCVLSVSP-LSNSLSTVDIVEAQSKYGFWGWNSWRQPIGFVAFFISSLAEC 227
108796686 148 AGYGSNNKYAFLGGLRAAAQSISYEIPLALCVLSVVL-MSNSLSTIEIVEQQSRFGILGWNIWRQPVGFIAFVISALAEC 226
22711910  145 AGYGSNNKYSFLGGLRAAAQAISYEIPLALCVLSVAL-LSHSLSTVDIVEEQSKYGILGWNIWRQPIGFIAFLIASLAEC 223
108773218 234 ERLPFDLPEAEEELVAGYQTEYSGIKFGIFYVASYLNLLVSSLFAVVLYLGGWNFPIPTtlIFFISM-----YKvslpld 308
11466757  228 ERLPFDLPEAEEELVAGYQTEYSGMKFAFFYLASYLNLLVSSLFVTILYLGGWHFSIPF--FSLFKN-----FEwn---l 297
34501456  229 ERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLASSLFVTILYLGGWHFSIPF--LLNSNY-----LEwv---- 297
28202229  228 ERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPf--LPNFPY-----LEwk---- 296
18860374  229 ERLPFDLPEAEEELVAGYQTEYSSIKFGFFFIGSYLNLLVSSLFVTVLYLGGWDLSLPF--LPGLNHitmtwYS------ 300
49574629  229 ERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVGSYLNLLASSLFVVVLYLGGWDFSIPF----VENF-----GQivstss 299
301353345 229 ERLPFDLPEAEEELVAGYQTEYSGIKFGLSYVGSYPNLLVSSPFVTVLYLGGWDSSIPF----FENL-----GQdssfpd 299
60117228  228 ERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASHPNLLTSSLSATILYLGGWNSPIPF--LFLPKFdrlg-------wn 298
108796686 227 ERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLFASSLFVTILYLGGWSPNISFeqVFNWEQ------------- 293
22711910  224 ERLPFDLPEAEEELVAGYQTEYCGIKFGLFYVGSYLNLLVSALFVSVLYLGGWNFSLPW--INFPIL-----LTen---- 292
108773218 309 sSNLLLELIIPIIHISITLAKTYLFIFFAILARWTLPRIRIDQLLDLGWKFLLPMAVGNLLLTASFQLTLF 379
11466757  298 mSNGISEVISIIIGIVITLVKSYLFLFISIMTRWTLPRIRIDQLLNLGWKFLLPIALGNLLLTTSFQLFLL 368
34501456  298 fSHGSNQVINIIIGIIIVLIKSYLFSFIAIMTRWTLPRVRMDQLLDLGWKFLLPIALGNLLLTASFQAFLL 368
28202229  297 ftAETSEVINVIIGIIITLAKAYSFLFISIVTRWTLPRVRMDQLLNLGWKFLLPIALGNLLLTASFQLIA- 366
18860374  301 -SDGITEVPSIFLSFFITLIKAFLFLFVSIAARWTLPRVRMDQLLDLGWKFLLPIALGNLLLTASFQLLLL 370
49574629  300 vIDKSLDTLKPIVEVATTLSKSYFYLFFSILTRWTLPRVRMDQLLDLGWKFLLPIALGNLLLTASFRILLI 370
301353345 300 pSDESFGVLGPMLGVITTLSKSYLFIFISILTRWTLPRVRIDQLLDLGWKFLLPIALGNSLLTASFQSLLI 370
60117228  299 sTDETSEVISITIAIIITLAKAYSFLFISIATRWTLPRVRMDQLLDLGWKSLLPVALGNSLPTASFQLSSP 369
108796686 294 -GEQLFAVLDGLIAFAITLSKAYLFLFASILTRWTLPRVRMDQLLDLGWKFLLPVALGNLLLTASFELALL 363
22711910  293 dFALSLNIVNATLGIAITLGKAYLFLFLSILARWTLPRVRMDQLLDLGWKFLLPVSLGNLLLTASLQLALL 363
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