Conserved Protein Domain Family
T_den_put_tspse

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TIGR01784: T_den_put_tspse 
conserved hypothetical protein (putative transposase or invertase)
Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.
Statistics
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PSSM-Id: 273806
Aligned: 14 rows
Threshold Bit Score: 185.678
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P37415        10 PHDATFRQFLTQpD-Ia-RDFMELHLPAELRAIC--DLSTLKLESGSFVEDDLRQYFSDVLYSLKTtagD----GYIHVL 81  Salmonella ente...
P31665         8 PHDAVFKQFLMHaE-Ta-RDFLEIHLPVELRELC--DLNTLHLESGSFIEESLKGHSTDVLYSVQMqgnP----GYLHVV 79  Escherichia col...
ZP_00045982   16 TADPIFSWVM---E-Q--GNNCRDLLRAIAPEL---HIQTAGFETQKRLKFHPAMHGIIPDIYATD---D----KGRVFD 79  Lactobacillus g...
ZP_00046122   16 TDDLMFQNVM---K-D--PVNCQMFLHEVLPDL---NIQDLTVRTQERIAFNKEEKFSVLDVLIKD---S----KGRRYD 79  Lactobacillus g...
ZP_00100286   15 KIDYAFKLIFGKeG-N--EAILIAFLNAALKLPQerRIEAITIMNPELNKEYQGDKKSILDVRAET---S----EGMQIN 84  Desulfitobacter...
ZP_00099465   10 INDYLFKYIFGRqE-N--KDILLSFLNAVLSPAGedELTDITLSDRELDPEHLKDKMSRLDILGVA---N----DGSLIN 79  Desulfitobacter...
ZP_00106002    2 KTDIIFYRLF---Q-E----FPDIFFE-LIGNPPe-EASLYQFSS---VEIKQTAFRIDGVFLPTQg--S----ENQIYF 62  Nostoc punctifo...
BAB75536       2 QTDKIFYSLF---Q-A----FPSIFFA-IIGETDi-NPSTYEFVS---VELKETAFRIDGVFKPVNe-sT----EEPLYF 63  Nostoc sp. PCC ...
WP_003461285   9 QIDFVFKKIFGT-EkN--KPILINFLNAVIKPTT--PIKDVEIKNNDIDKDFLEDKFSRLDVKATT---S----NKEHIN 76  Clostridium per...
WP_001282185   7 PHDRLIRETLQD-K-EdaISFFKNSLPEKVIELL--DLKRLELTQSSFISENLKEEQTDLLFQIPL---KsgkkANVYLL 79  Leptospira inte...
P37415        82 VEHQSTPDKHMAFRLIRYAVaAMQRHLEAGHKKLPLVIPVLFYTgkrsp--ypysTRWLDEFDDTALADKLYSSAFPl-- 157 Salmonella ente...
P31665        80 IEHQSKPDKKMAFRMMRYSIaAMHRHLEADHDKLPLVVPILFYQgeatp--yplsMCWFDMFYSPELARRVYNSPFPl-- 155 Escherichia col...
ZP_00045982   80 IELQMTLPDFLGKRMRYYFS-MMDQSLFMQGENYRNLPTTYLIL-----------ILPTDPLGLDQYRYNTTWSTEGf-- 145 Lactobacillus g...
ZP_00046122   80 IEMQVAPQKDLDKRARYYMYkMMEAGFLHQGDGYGELAAVYVIF-----------ILPFDPKGKGLKRYSFTYSARE--- 145 Lactobacillus g...
ZP_00100286   85 IEIQLSNQYDMEKRSLYYWA-EMYSRQIREGMAYKELAKAVTIN-----------ILDFNYLKQTSNYHNVFHLYED--- 149 Desulfitobacter...
ZP_00099465   80 IEVQIASEKNIDKRTLYYWA-KIYQSQLQSGMLYKDLARTVTVN-----------VLNFSFLPDAQRYHSMFSLYEA--- 144 Desulfitobacter...
ZP_00106002   63 VEVQFQADGEIYSRLIAEIClYLRQNQPSNDWGAVVLYPNRNVDtg--------nIKHYREFFTSGRVKRIYLDELGe-- 132 Nostoc punctifo...
BAB75536      64 VEVQFQLDPKFYRRFFAEIFlYLRQNPSVNFWRAVVIYPQRIIEpd--------dQQPYRLILDSSQIQRIYLDELGt-- 133 Nostoc sp. PCC ...
WP_003461285  77 IEIQVKNEYNMIQRTLYYWS-KMYSEQIQNRDNYSKLERTVCIN-----------ILNFKYLK-NDKYHNAYRLKEI--- 140 Clostridium per...
WP_001282185  80 FEHKSYLDEAVFSQLLGYIS-AIYKSQFKTDKKYSVVIPFVFYHgertwtlgnsfQDRFILSKNEEEVFKKYIPDFElel 158 Leptospira inte...
P37415       158 --VDVTVIPDdeiAGHRSMAALTLLQKHIHQRDLAEl----VDRLAPILLAGYLSSSQVISLV-----H----YIVQAGE 222 Salmonella ente...
P31665       156 --VDITITPDdeiMQHRRIAILELLQKHIRQRDLMLl----LEQLVTLIDEGYTSGSQLVAMQ-----N----YMLQRGH 220 Escherichia col...
ZP_00045982  146 -rHDPLNIG-----QNLILLNASGTKGEITPRLQG---------FFDLMRGKI--NTNDSFIQ-----K------LQSDV 197 Lactobacillus g...
ZP_00046122  146 --DKSVELND---ESEVIYLSSKGKKGDVSQGLDD---------FYSLMDGKS--TTNSKFIK-----R------IKKTM 198 Lactobacillus g...
ZP_00100286  150 --EEKFQLTD---ALEMHFMELPKLLAKWRNREISpwe-neLVRWLLLLEGADNQEILQTLEE-----IamkdPVLHQAM 218 Desulfitobacter...
ZP_00099465  145 --HSGLRLNR---DLEIHFLELEKWKALSTKPRTR------LDKWLMYLSNTDP----KELEE-----IamsePAIGKAL 204 Desulfitobacter...
ZP_00106002  133 --GASLPIG----IATAKLVIATDDIAIVQARELID-----RTKSEINSPPKQQQLLQFIETI-----Lay--kFPTMSR 194 Nostoc punctifo...
BAB75536     134 --ASENSLQ----LAIVQLIIASEATAIDQGRQLII-----QARQELTDEANKKQIVELIETI-----Lly--kFTNLSR 195 Nostoc sp. PCC ...
WP_003461285 141 --TSNEELTD---LQEIHFIELPKFNEIGNKENVDVekmdaLEKWLEFLVEPESNTVRQLELS-----N----EEIKLAK 206 Clostridium per...
WP_001282185 159 fdLSNVDLSR---LESITLRVILGVVQKIWEGDASFlg--yLGEVFELLTGLKNESKRVEIFQklflyI----FNVREIE 229 Leptospira inte...
P37415       223 TSDAEAFVRELAQRvPQHGDALMTIAqqleqkgiEKGIQLGEQRGIEKGrs----egEREATLKIARTMLQNCIDRNTVM 298 Salmonella ente...
P31665       221 TEQADLFYGVLRDR-ETGGESMMTLA--------QWFEEKGIEKGIQQG--------RQEVSQEFAQRLLSKGMSREDVA 283 Escherichia col...
ZP_00045982  198 EKYKTNPERRKELMdYQMKLDDMR--------------YVAKEEERVDA--------IKKMIKLSRKLNASNDFILKQLT 255 Lactobacillus g...
ZP_00046122  199 DNYRKTEEWSEHVMnTEQIKEMALAQ----------GVEEGKREATVSA--------ISKTVKMLKRMNQSNEQILQELK 260 Lactobacillus g...
ZP_00100286  219 TAWEETSDDPRIREaYFDRRKAVLDEka-----aIREAELRLKEALEKGraagiaagKAEGKAEVAKKLLDLGFEITKVA 293 Desulfitobacter...
ZP_00099465  205 TVEEIFLKNDKERYlYEMREKGIRDH--------LSAMDNAKTEGIEQGlaqgiaqgIERGKTEIALSMLKKGLSLNMIA 276 Desulfitobacter...
ZP_00106002  195 EEMQQMFGLS-ELK---QTRFYQ------------EAFQEGVEQGIEQGkv----qgIEQGKLRAVPAMLAAGLTVEQVA 254 Nostoc punctifo...
BAB75536     196 EEVAAMLGIDDEFK---KTRMYQSIK--------EDGLEEGRQEGRQEGrq----egKLQAKLEAIPRLLALGLNVEQIA 260 Nostoc sp. PCC ...
WP_003461285 207 SELYRLSMDSKEREqYNMREKAIYDR--------ISALESSK----EEG--------KLEEKLEVAKKLLIANVDIDIIN 266 Clostridium per...
WP_001282185 230 PTEITSLLSHSRYn-REYEDLIMT------------TAEKLRKEGKIEG------------KIEDAKKMFKEGFKLDVVL 284 Leptospira inte...
P37415       299 KMTG--LTEDDLAQI 311 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
P31665       284 EMAN--LPLAEIDKV 296 Escherichia coli K-12
ZP_00045982  256 EDYGsyFSQKELKQF 270 Lactobacillus gasseri ATCC 33323
ZP_00046122  261 QDYSdeFSDEELEEF 275 Lactobacillus gasseri ATCC 33323
ZP_00100286  294 EATG--LSEKDIRSL 306 Desulfitobacterium hafniense
ZP_00099465  277 EITD--LPIEQIEEI 289 Desulfitobacterium hafniense
ZP_00106002  255 QALD--LSVEQVRQA 267 Nostoc punctiforme PCC 73102
BAB75536     261 GALD--LTIEQVQEV 273 Nostoc sp. PCC 7120
WP_003461285 267 SSTG--LSKDELLKI 279 Clostridium perfringens
WP_001282185 285 RITG--LTEQELKDY 297 Leptospira interrogans
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