Conserved Protein Domain Family
OTU_plant_OTU4-like

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cd22760: OTU_plant_OTU4-like 
OTU (ovarian tumor) domain of deubiquitinating enzyme OTU4 from plants and similar proteins
Deubiquitinating enzyme OTU4, also called OTU domain-containing protein 4, is a deubiquitinase (DUB) or ubiquitin thiolesterase (EC 3.4.19.12) that catalyzes the thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin, a small regulatory protein that can be conjugated to a large range of target proteins. Protein ubiquitination is a post-translational modification of mostly Lys residues that regulates many cellular processes, including protein degradation, intracellular trafficking, cell signaling, autophagy, transcription, translation, and the DNA damage response. OTU4 may play an important regulatory role at the level of protein turnover by preventing degradation. OTU4 belongs to the OTU family of cysteine proteases that use a conserved cysteine, histidine, and an aspartate, as the catalytic triad.
Statistics
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PSSM-Id: 438597
Aligned: 9 rows
Threshold Bit Score: 193.747
Created: 6-Oct-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putativeactive site
Feature 1:putative polypeptide substrate binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #                                                       #  #      ##
Q8LBZ4        167 DYSIIGIPGDGRCLFRSVAHGFCLRsgklapGEKMQRELADELRTRVADEFIQRRQEtEWFVEGDFDTYVRQIRdpHVWG 246  thale cress
XP_002991800  222 EFAVIGIPGDGRCLFRAVAHGWCTKqgkptpDEETQRELADNLREKVVDELVKRRAEsEWFIEGDFDEYTRRMRqaNVWG 301  Selaginella m...
ABR16871      270 DYSVTAIPGDGRCLFRAVAHGASLRsgkpapNESLQRELADELRTRVADELLKRREEtEWFIEGDFDKYVEQIKrpHVWG 349  Sitka spruce
XP_024370930  312 DYTVTGIPGDGRCLFRAVAHGSCLRrgkdapDETAQRELADELRNKVADELIKRRDStEWFIEGDFDQYVERMRqtYVWG 391  Physcomitrell...
XP_003079448   70 AFEVHPVAGDGRCLFRSLSVARSLSisgermDEADELREADELRTSAVNELLERRDEtEWFIEGDFDEYCAKMRasYAWG 149  Ostreococcus ...
XP_003059214   78 TYDVHAVAGDGRCLFRSVAAAMELAragaraSDAEELSLADALRARACDELVARREDvEWFIEGDFETYVERMRnpWAWG 157  Micromonas pu...
OLP86819     1077 GLRVVPTKPDGNCMFRAVAQGEAAAlkk-plSSEKEDVRSQELRKLAMAEFVKRREElGWIVEGDFDKYIARMSrlGSWG 1155 Symbiodinium ...
GAQ86277      288 NYRRIGVRGDGRCLFRAVAYGHNVQekrgaqDSERDEQQADQLRNMALDELVRRRDEsEWFIEGDFDHYVHRMRhpGVWG 367  Klebsormidium...
XP_007513912   97 FYDIHKIAGDGRCLFRSLVVSKGIEdenarlSAEREVLEADTLREQTINELMKRREElEWIVEGDFEEYCANMRypGAWG 176  Bathycoccus p...
Feature 1         ##                                    # #                                      #
Q8LBZ4        247 GEPELFMASHVLq-MPITVYMKDdka-------gglISIAEYGQEYgk------------------------dDPIRVLY 294  thale cress
XP_002991800  302 GEPELLMLSHVLg-LPITVYMADers-------ngvIAIAEYGQEYgkg----------------------kgNPIRVLY 351  Selaginella m...
ABR16871      350 GEPELLMASHVLq-MPITVYMREret-------dglIAIAEYGQDYgk------------------------gNPISVLY 397  Sitka spruce
XP_024370930  392 GEPELLMLSHVLe-MPITVYMTEektk------sglIAIAEYGQEHgk------------------------iDPIRVLY 440  Physcomitrell...
XP_003079448  150 GEPEILMLTHVLa-SPIGVWMDSta---------glKRIARYGEDEyas---------------------epqFDLDVLF 198  Ostreococcus ...
XP_003059214  158 GEPEILMLARALr-TPIEVFVVVegenasareggelRSIGRYGEDEeeeedgdeeeeeeggeeegasggaeggGGVAVLF 236  Micromonas pu...
OLP86819     1156 GEPELLVLSQHVlkRPIEVYMQDv-----------aKPFLVYAQELp-------------------------gEPVRILF 1199 Symbiodinium ...
GAQ86277      368 GEPELLMLSHALk-KPITVYIPDpsg-------agiLSIAEYGQEYg-------------------------kAAIAVLY 414  Klebsormidium...
XP_007513912  177 GEPEILVATHVLq-RPIEVHMAMage--------plRSIGIYGNEDygtt-------------------kdskTKLMLLF 228  Bathycoccus p...
Feature 1            ###    
Q8LBZ4        295 HgFGHYDALL 304  thale cress
XP_002991800  352 HgFGHYDALL 361  Selaginella moellendorffii
ABR16871      398 HgFGHYDALQ 407  Sitka spruce
XP_024370930  441 HgFGHYEALQ 450  Physcomitrella patens
XP_003079448  199 HgGGHYEALR 208  Ostreococcus tauri
XP_003059214  237 HgAGHYEALT 246  Micromonas pusilla CCMP1545
OLP86819     1200 HgYGHYEALV 1209 Symbiodinium microadriaticum
GAQ86277      415 NgSTHYDALL 424  Klebsormidium nitens
XP_007513912  229 HgQGHYEALS 238  Bathycoccus prasinos

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