6ESB


Conserved Protein Domain Family
Polyoma_coat2

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pfam00761: Polyoma_coat2 
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Polyomavirus coat protein
Statistics
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PSSM-Id: 366290
Aligned: 9 rows
Threshold Bit Score: 342.591
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6ESB_7   1 GAALALLGDLVASVSEAAAATGFSVAEIAAGEAAAAIEV---QIASLA-TVE-GI----TSTSEAIAAIGLTPQTYAVIA 71 
P03098   2 GSAISVIIEMISYLSEISSVTGISVEAILSGEAFAAIDA---QVTSLI-TME-GF----LGAETALSSIGLSEDMFIFMQ 72  Mesocricetus auratus ...
P24596   2 GAFLAVL----AEVFDLASITGLSVESILSGEALTTAELlqsHINNLV-VYG-GL----TE-AEALAAVEVTPQAFAALT 70  Kilham polyomavirus
P24849   2 GALLTIL----AEVFELATATGLSAEAILTGEAFTTAEL---LQAHIAnLVEvGE----LSVAEALAATEVTSEAFEALQ 70  Bos taurus polyomavir...
P04011   2 GGVLSLLFNISEIAAELSLSTGFTVDAILTGEAFAAVST---EAAWLI-EIE-AVdlagLSTLEALSLTGLTTEQFSLLS 76  B-lymphotropic polyom...
P13892   2 GAIIS----AIAGLFELGALGGLAV---DAAVNTAEIEA---FIGELV-LQDfSV----AEIFDAIETSGIPLANTAVPV 66  Aves polyomavirus 1
P14997   2 GAALALLGDLVASVSEAAAATGFSVAEIAAGEAAAAIEV---QIASLA-TVE-GI----TTTSEAIAAIGLTPQTYAVIA 72  BK virus strain AS
P03093   2 GAALTLLGDLIATVSEAAAATGFSVAEIAAGEAAAAIEV---QLASVA-TVE-GL----T-TSEAIAAIGLIPQAYAVIS 71  Macaca mulatta polyom...
P88897   2 GAALALLGDLVATVSEAAAATGFSVAEIAAGEAAATIEV---EIASLA-TVE-GI----TSTSEAIAAIGLTPETYAVIT 72  JC polyomavirus
6ESB_7  72 GA----P----GAI---AGF-------AALI-QTVSg----ISSL---AQVGyRFFSDWDHKVSTVglyqQSGMALELFN 125
P03098  73 AA----PeltsTVM---TEFvresvqtAFIF-QTVA-----GSAA---FSLG-SLHGYLAHEVPIV----NRNMALIPRR 131 Mesocricetus auratus ...
P24596  71 SLfpnfP----QAL---GAL-------AATE-FTATgaltvGAAV---SAALyPYY--WDYRTPVAd----lNMALQIWY 126 Kilham polyomavirus
P24849  71 SIssvlP----TAF---IGV-------AATE-GAIL-----GSLItltATSSaLYPSTWKHSTPSAnlnqE--MALVPYI 128 Bos taurus polyomavir...
P04011  77 AI----P----TALnnaIGI-------GVFF-QTVSg----ASAV---VAAGvTTFG-YSKEVPVV------NMALVPWF 126 B-lymphotropic polyom...
P13892  67 AE----L----QQT---AAT-------SGLIgQALSa----PSLI---AASVkAFAGDpv--------aaGNNMALQVW- 112 Aves polyomavirus 1
P14997  73 GA----P----GAI---AGF-------AALI-QTVTg----ISSL---AQVGyRFFSDWDHKVSTVglyqQSGMALELFN 126 BK virus strain AS
P03093  72 GA----P----AAI---AGF-------AALL-QTVTg----VSAV---AQVGyRFFSDWDHKVSTVglyqQPGMAVDLYR 125 Macaca mulatta polyom...
P88897  73 GA----P----GAV---AGF-------AALV-QTVTg----GSAI---AQLGyRFFADWDHKVSTVglfqQPAMALQLFN 126 JC polyomavirus
6ESB_7 126 PDEYYDILFPGVNTFVnniQYLDPR-H-WGPSLFATISQALW-H-VIRD------DIPSI--T--S--QELQRRTERFFR 189
P03098 132 PADYYDILFPGVQSFT---HALDVI-HgWGHSLFQSVGEYIW-DtLRRE------TQGAV--E--SavRDLSLQTTHQFL 196 Mesocricetus auratus ...
P24596 127 PD--LDILFPGALPFArfvNYIDPA-N-WAADLYRAVGRYFW-E-RVQAaginfiEQQME--T--G--RELAMRSVTSLS 194 Kilham polyomavirus
P24849 129 GD--LDIFFPGAETISrfvYSIDPF-R-WASYLYNIVGRAVW-EhLFRE------TRRQI--AyhT--TDIAGRTAQSIH 193 Bos taurus polyomavir...
P04011 127 PQ--VDYLFPGFTSFS---YYLNAVlD-WGESLFHAVGREVWrH-LMRQ------ATLQIgqA--T--RAVAVRSTNELS 189 B-lymphotropic polyom...
P13892 113 -RDQMDILFPGAEWFSnavHNINPL-A-WAQSLYEQVGQSIW-N-YMTG------NIGQA--V--I--HQIEERTTALIV 175 Aves polyomavirus 1
P14997 127 PDEYYDILFPGVNTFVnniQYLDPR-H-WGPSLFATISQALW-H-VIRD------DIPAI--T--S--QELQRRTERFFR 190 BK virus strain AS
P03093 126 PDDYYDILFPGVQTFVhsvQYLDPR-H-WGPTLFNAISQAFW-R-VIQN------DIPRL--T--S--QELERRTQRYLR 189 Macaca mulatta polyom...
P88897 127 PEDYYDILFPGVNAFVnniHYLDPR-H-WGPSLFSTISQAFW-N-LVRD------DLPSL--T--S--REIQRRTQKLFV 190 JC polyomavirus
6ESB_7 190 -------DSLARFLEETTWTIVNAPINFYNYI----QQYYSDLSPIRPSMVRQVAEregtrvHFGHTY--SIDDADSIEE 256
P03098 197 -------DAIARMMENSRWVVTNLPREAYSRIygglQNYYAELPGINPAQRRQIER------ALEYSNrpSIEDANSRQV 263 Mesocricetus auratus ...
P24596 195 -------ETLSQYFENARWAVSGLSTSLYHGL----ESYYSQL-GLSPIQQRQLAR------NLGHPQpyRYDLYDAPQL 256 Kilham polyomavirus
P24849 194 -------HTIANFLENVRWTVSHLGTNLYSGL----HNYYRQLPPLNPPQSRELARrl------------gVPQPDRQIF 250 Bos taurus polyomavir...
P04011 190 -------HTLAQIAENARWALTSGPVHIYSSV----QDYYRYLPARNPIQLRQey------rNRGEPPpsRADFEYQENR 252 B-lymphotropic polyom...
P13892 176 yqsrgiyDILARALETARWTLTTAAVDTYQTL----KSYYGELPAVSG---RVEAFrryhevAQGRSFfeDSDIQDVLEG 248 Aves polyomavirus 1
P14997 191 -------DSLARFLEETTWTIVNAPINFYNYI----QDYYSNLSPIRPSMVRQVAEregthvNFGHTY--SIDNADSIEE 257 BK virus strain AS
P03093 190 -------DSLARFLEETTWTVINAPVNWYNSL----QDYYSTLSPIRPTMVRQVANreglqiSFGHTYd-NIDEADSIQQ 257 Macaca mulatta polyom...
P88897 191 -------ESLARFLEETTWAIVNSPVNLYNYI----SDYYSRLSPVRPSMVRQVAQregtyiSFGHSYtqSIDDADSIQE 259 JC polyomavirus
6ESB_7 257 VTQr--mDL--RNQQsVH--------------SGEFIEKTIAPGGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNQK 318
P03098 264 LEA----EL--GRPD-VQrrsqqqedssswfeSGANIMRYFAPGGAHQRVTPDWMLPLILGLYGDISPTWQTYIDEVEYG 336 Mesocricetus auratus ...
P24596 257 KGQ--------------V--------------SATYVTKVDPPGGANQRSAPDWMLPLLLGLYGDLTP---SWKDTLEEL 305 Kilham polyomavirus
P24849 251 EKGe--eGM--KHP---V--------------SAEYVEKYGAPGGAEQRVAPDWLLPLLLGLYGDLTPAWEAEVEEEENE 309 Bos taurus polyomavir...
P04011 253 EGQrarrEL--GYDE-PR--------------SGQYVEHYTAPGGAHQRVTQDWMLPLILGLYGDITPTWEVELNKLEKE 315 B-lymphotropic polyom...
P13892 249 KKAq--kRI--EGPQ-EM--------------TGQTIEQQTPPGGAMQRHANDWLLPLILGLYGDLTP-----EWRYQLK 304 Aves polyomavirus 1
P14997 258 VTQr--mDL--RNKEsVH--------------SGEFIEKTIAPGGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNQK 319 BK virus strain AS
P03093 258 VTEr--wEAqsQSPN-VQ--------------SGEFIEKFEAPGGANQRTAPQWMLPLLLGLYGSVTSALKAYEDGPNKK 320 Macaca mulatta polyom...
P88897 260 VTQr--lDL--KTPN-VQ--------------SGEFIEKSIAPGGANQRSAPQWMLPLLLGLYGTVTPALEAYEDGPNKK 320 JC polyomavirus
6ESB_7 319 KRR 321
P03098 337 PKK 339 Mesocricetus auratus polyomavirus 1
P24596 306 EAE 308 Kilham polyomavirus
P24849 310 QDE 312 Bos taurus polyomavirus 1
P04011 316 EDG 318 B-lymphotropic polyomavirus
P13892 305 ERL 307 Aves polyomavirus 1
P14997 320 KRR 322 BK virus strain AS
P03093 321 KRK 323 Macaca mulatta polyomavirus 1
P88897 321 KRR 323 JC polyomavirus
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