Conserved Protein Domain Family
spore_YlmC_YmxH

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TIGR02888: spore_YlmC_YmxH 
sporulation protein, YlmC/YmxH family
Members of this family belong to the broader family of PRC-barrel domain proteins (see pfam05239), but are found only in endospore-forming bacteria of the Firmicutes lineage. Most such species have exactly two members of this family and all have at least one; the function is unknown. One of two members from Bacillus subtilis, YmxH, is strongly induced by the mother cell-specific sigma-E factor. [Cellular processes, Sporulation and germination]
Statistics
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PSSM-Id: 274339
Aligned: 12 rows
Threshold Bit Score: 81.1871
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
tigr:CHY_1150     2 RLEELAGKEIINVKTGSRLGVVegVDFHIIPETGEIVSVIMPgkGGIFSFFKENIP-KEIPWHAVKLIGSEVILIEL 77  Carboxydothermu...
BAB81466          7 SLNNLRAMEVIDVSEGKKLGLI--ADVKIDCDDNRILSIIIP--GEKTSFFSKSED-IEIEWSDVYKVGVDVILIDS 78  Clostridium per...
AAM24837          3 KASDLRDKEVIDINTGEKLGNI--IDIDVNLEEGKIEGIILPkeTGFFRFFSKEAE-IYLPWAAIKKIGSDVILVDF 76  Caldanaerobacte...
tigr:CHY_2053     3 RLSELKYREVINVADGRRLGLI--KDIDLDLERGKINGLIIPvaTRSWNFWARNDD-VFIPWSAIKKIGIDVILVDL 76  Carboxydothermu...
BAD40209          3 KASDLR-KDVIDIRTGRRLGEL--IDVEIDEKSGRITAIIVPgeGRWFGLWGGGPD-IVIPWTKIVCIGPDCILVEI 75  Symbiobacterium...
BAB06271          3 KISDLQAKDIVNMENGRRLGTI--TDLDINLTTGQISSLVIGggGKVMGLFGRGEDeVVIPWKNIIKIGSDVILVEV 77  Bacillus halodu...
BAC13433          3 KLSDLQMKEIIAVDDGSRLGHI--IDLEIDGNNGRVLAIIVEgkEKKQGMFAKADE-LLIAWEKIVRIGEEVILVKE 76  Oceanobacillus ...
AAM24605          4 RLSEFGSKEIVNIVDGKRWGLVedSDLIIDEDTGKIHSIVLYepGGFFR--GRGNY-IEIPWDAIKRIGDDMIIVEF 77  Caldanaerobacte...
jgilanl:BCZK3563  2 RLSELSGKEIVNLERAEKMGVLgyVDLEIDEKDGRIQTLIIPa-GKWGGFKKEPQE-IRVAWNQIKKVGHDMILCDI 76  Bacillus cereus...
BAC13563          3 RFRDMSDKEIINVSEGKRLGVLgqTDLEINEKNGQIEAFIIPs-YKWFGLVKEGEE-TKINWKSIRKIGEDMIMIDT 77  Oceanobacillus ...
AAK79774          7 YYSEVEKYEIININDGEKYATVsnNDIIID-DSGKMISLIIGnnNTGFSLFSKNEF-FEVEWQYIKKIGARTIIMDV 81  Clostridium ace...
WP_031367628      7 RYSDMERYELINVNDGDKYGFLgnNDVVID-EDGYLKFLILSesGGKLGLFSKPSL-LEVSWDSVKKIGSRTIIIDA 81  Clostridium bot...
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