Conserved Protein Domain Family
DOMON_CIL1_like

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cd09629: DOMON_CIL1_like 
DOMON-like domain of Brassica carinata CIL1 and similar proteins
Brassica carinata CIL1 has been described as involved in suppression of axillary meristem development. It contains a single DOMON domain, the function of which is unclear. Members in this diverse family of plant proteins may have a cytochrome b561 domain C-terminal to the DOMON domain, some members from Arabidopsis have been characterized as auxin-responsive or auxin-induced proteins. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases.
Statistics
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PSSM-Id: 187687
Aligned: 44 rows
Threshold Bit Score: 165.128
Created: 23-Nov-2007
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative ligand
Feature 1:putative ligand binding site [chemical binding site]
Evidence:
  • Comment:by similarity to other members of this family
  • Comment:ligand may be a heme, carbohydrate, or other small molecule

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                               # ##             ###                     
ABS30419      37 FKNCMDLPVLDSFLHYTYDAANs-SLSVAFVATpprSGDWVAWGINPTGt-KMIGSQAFVAYspRAGARpevntYNISSY 114 Abyssinian mustard
XP_001762881  24 FKACQMLPKLSSTLAWTIHNETn-KIDFAFSGTapvASGWVGWGINPTAa-AMVGTQALIAFqsGQGAIvh--sYAITGP 99  Physcomitrella ...
NP_565316     34 FEKCISLPTQQASIAWTYHPHNa-TLDLCFFGTfisPSGWVGWGINPDSpaQMTGSRVLIAFpdPNSGQlillpYVLDSS 112 thale cress
EDQ59788      36 FEQCQDLAALGATYAWSLNNDTn-SVDFAFSEDmqvTGGWIGWGINPTKgpNMEGTQALIAFknGTSLIvm--eYDVTNA 112 Physcomitrella ...
EFJ38402       3 FATCVNLPSQQASLAWSYNASGn-TLAVVFSGVapsSSGWVGWGINFGArpVMIGTNALVAFqaGNGSNll--dYKLTEE 79  Selaginella moe...
AAN59777      50 YAKCIALPTQGATLAWTYDARNa-TLDAAFTGSfisPSGWVAWGVNKDAp-AMTGARVLAAFsdPSTGAllalpFLLSPD 127 Japanese rice
EDQ53444      24 FTACQTIPEVGANLAWRIRNDSsnAIDFAYSGTapsASGWVGWGINPAGa-GMVGTQALIAFqsTTGAVvy--qYPVTGA 100 Physcomitrella ...
EFJ24539      39 YFGACNTLTGPAALAWTYDPADs-TLKVAFLGQaasPMGWVGWGINLGSrpVMVGTNALIGFrtQDRSYvd--tYKLTTD 115 Selaginella moe...
EDQ54338      35 YDACTLLPALGASLAFTYNNSSn-SIDFAFTEDlesASGWVAWGINPDGa-QMVGTQALAAFsnNTGVSir--tYNVNGA 110 Physcomitrella ...
EFJ07290      35 FRACRNLAEQGATLAWTHTSSSn-TLDAVFTGTapsSSGWVAWGINTGPapVMMGADVFLAFraSNGTAmi-ltYKLTQD 112 Selaginella moe...
Feature 1                                                                                # #     
ABS30419     115 SLSAGr-------LTFDFWNLRAESMAGn--------rIVIYTSVKVPAGa---dSVNQVWQIGGn--vTGGRPGPHPMt 174 Abyssinian mustard
XP_001762881 100 IKGGApcv--pgnLSLDFTGTSVEISGTe---------ITIFATLTKKSNgs--wTMNHVWNEGStvdlDTNAIGPHAMs 166 Physcomitrella ...
NP_565316    113 VKLQKgpllsrplDLVRLSSSSASLYGGkmatirngasVQIYASVKLSSNn---tKIHHVWNRGLy--vQGYSPTIHPTt 187 thale cress
EDQ59788     113 VKDGApll--ptlVSVKYSNLSAVMVKTt---------VTIFGTFPLGAGka--aTVDHVWNRGRsvnpITFELAEHPLa 179 Physcomitrella ...
EFJ38402      80 TQALRplt--cspIDLVVLDRAVVIQERn---------MRLYALIQLRPNq---tRLNHVWNRGSs--vINFSPQQHALg 143 Selaginella moe...
AAN59777     128 VKLQAsplv-srpLDIPLLASSASLVDPartvr-dgatVTIAATIRLSPNr---tKLHFVWNRGLy--vQGYSPTIHPTd 200 Japanese rice
EDQ53444     101 VKGGQsli--pgdLTLNFTDTSAVVSGAe---------MTIFSTLNLKAGds--mSMQYVWGQGRtvdlTNNAVGPHSIp 167 Physcomitrella ...
EFJ24539     116 IQAGAqlt--pgtLDISVLDKAVEITGTt---------VTIFATIQLRPNq---tKINHVWNRGSk--tIGVSPLQHGLs 179 Selaginella moe...
EDQ54338     111 VKGGVplv--pgtVSVAYSNYSAVVVGTt---------ATITGTVLLKSGql--tSFNVVWNRGSevdvATAALRSHSLt 177 Physcomitrella ...
EFJ07290     113 LMTKLpsp---gpIGIRVLDKSVDISGNr---------MKLFVRIQLPRNgsagsVINHIWNRGAa--mQGSSPLPHDT- 177 Selaginella moe...
Feature 1                 #     
ABS30419     175 -PANLASTRMLRLTG 188 Abyssinian mustard
XP_001762881 167 -GDSVASASIINLET 180 Physcomitrella patens subsp. patens
NP_565316    188 -STDLSSFSTFDVTS 201 thale cress
EDQ59788     180 -PANLASVGTVDLAT 193 Physcomitrella patens subsp. patens
EFJ38402     144 -TNDLNGRGVFDITS 157 Selaginella moellendorffii
AAN59777     201 -ASDLASHATVDILT 214 Japanese rice
EDQ53444     168 -ISGDAAVTNIDLLT 181 Physcomitrella patens subsp. patens
EFJ24539     180 -PEDRSGVGVIDLST 193 Selaginella moellendorffii
EDQ54338     178 nADNLRSTLVIDMGT 192 Physcomitrella patens subsp. patens
EFJ07290     178 -KNDIKSAGSINIAS 191 Selaginella moellendorffii

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