1IRU


Conserved Protein Domain Family
proteasome_alpha_type_5

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cd03753: proteasome_alpha_type_5 
Click on image for an interactive view with Cn3D
proteasome_alpha_type_5. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Statistics
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PSSM-Id: 239722
Aligned: 21 rows
Threshold Bit Score: 344.706
Created: 12-Jun-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitealpha subunit
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                #               # #            #                     
1IRU_S      8 YDRGVNTFSPEGRLFQVEYDIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKT 87  cattle
Q94561      8 NDHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGSSIEKIIEIDDHIGAAVSGLTADART 87  Entamoeba histolytica
Q95008      8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRT 87  Caenorhabditis ele...
Q9XZG5      8 YDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARI 87  Trypanosoma brucei...
Q95083      8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDKHIGCATSGLMADART 87  fruit fly
EAA21516    8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAIGICVNDGVILASERRIASPLIEKDSVEKLLPIDDHIGCAMSGLMADART 87  Plasmodium yoelii ...
CAD51017    8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGICVNDGVILASERRISSTLIEKDSVEKLLSIDDHIGCAMSGLMADART 87  Plasmodium falcipa...
AAP06025    8 YDRGVNTFSPEGRLFQVEYAIEATKLGSTGIGIKTNEGVVMAVEKRVNSTLIIPSSIEKIFEVDKHIACAVSGLVADART 87  Schistosoma japonicum
BAD42871    8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKT 87  African clawed frog
XP_782337   8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIRTNEGIVLAVEKRVTSPLMEATSIEKIVEIDSHIGCAMSGLIADSRT 87  purple urchin
Feature 1                                                                                     
1IRU_S     88 LIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEedad--pgaMSRPFGVALLFGGVDekgPQLFHMDPSGTFVQC 165 cattle
Q94561     88 LIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEgsrk--kkvMSRPFGVALLIAGVDetgPRLFQTDPSGMFIEF 165 Entamoeba histolytica
Q95008     88 LVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDddv---kasMSRPFGVAMLFAGVDqegAKLFHLDPSGTFIDC 164 Caenorhabditis ele...
Q9XZG5     88 LVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGEsggr--kklMSRPFGVSLLIAGVDengPQLWQTDPSGTYTRY 165 Trypanosoma brucei...
Q95083     88 LIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDsgdsdgaaaMSRPFGVAILFAGIEagqPQLWHMDPSGTFVRH 167 fruit fly
EAA21516   88 LIDHARVECNHYKFIYNENINIKSCVELISELALDFSNlsdskrkkiMSRPFGVALLIGGVDkngPCLWYTEPSGTNTRF 167 Plasmodium yoelii ...
CAD51017   88 LIDYARVECNHYKFIYNENINIKSCVELISELALDFSNlsdskrkkiMSRPFGVALLIGGVDkngPCLWYTEPSGTNTRF 167 Plasmodium falcipa...
AAP06025   88 LIERARTEAAHHWFVYNEKMAIEDVTKAVSNLALAFGDddme--sgaMSRPFGVALLFAGVDergPQLYHMDPSGTYIRY 165 Schistosoma japonicum
BAD42871   88 LIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEedad--pgaMSRPFGVALLFGGADekgPQLFHMDPSGTFVQC 165 African clawed frog
XP_782337  88 MIDRARVEAQSHWFTYNEKMSVESVTQAVSNLALQFGDdeag--sgaMSRPFGVALLFAGIDqkgPILYHMDPSGTFLQF 165 purple urchin
Feature 1           #                                                
1IRU_S    166 DARAIGSASEGAQSSLQELYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATV 220 cattle
Q94561    166 YAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALV 220 Entamoeba histolytica
Q95008    165 KAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAILKQVMEEKLNSANVEVVVI 219 Caenorhabditis elegans
Q9XZG5    166 DAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQVMEEKLTKTSVEIAIV 220 Trypanosoma brucei brucei
Q95083    168 GAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTM 222 fruit fly
EAA21516  168 LAASIGSAQEGAELLLQENYNKNMSFEEAEILALTVLRQVMEDKLSSSNVEIAAI 222 Plasmodium yoelii yoelii
CAD51017  168 SAASIGSAQEGAELLLQENYKKDMTFEQAEILALTVLRQVMEDKLSTSNVEICAI 222 Plasmodium falciparum 3D7
AAP06025  166 EAKAIGSGSEGAQQALQEIYHKNMTLHEGCKHALSILKQVMEEKLDSTNVEMATV 220 Schistosoma japonicum
BAD42871  166 DARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLTILKQVMEEKLNATNIELATI 220 African clawed frog
XP_782337 166 DAKAIGSGSEGAQSQLQEVFHKSLTLKEACKESLVVLKQVMEEKLSSTNVEVATI 220 purple urchin

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