5U4O


Conserved Protein Domain Family
DdpA

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COG0747: DdpA 
ABC-type transport system, periplasmic component [Amino acid transport and metabolism]
Statistics
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PSSM-Id: 440510
Aligned: 874 rows
Threshold Bit Score: 114.251
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5U4O_A        48 Iarlsd-------------------------------------------------------adnlDPHFITNIPSASVVY 72 
WP_014957706  30 esqdppvldppglenkitfrekntyavlpntihwltndsdpvfssnkaqkggifhtaitsfpmtfRVVGpDS--NGSFRS 107
WP_044003124   1 ----------------------mkhlfsglivllwgslfyscspraantdtgtvrihwvrdpenlDPLVVDNSSAYEVAN 58 
WP_119678819   1 ---------mrtttfefaaaalgflgilisgpvgnglapepaqaaeaapdskelrigvseypgsfHPNFNGQGIRSYVGW 71 
NP_796551      1 ------mkriilastlsalsfgamsatlptdlnwqtnwdepqygspeakrggtyrtfmssfpqtlRSVGpDA--NSGLRS 72 
WP_058023109  18 vtrdntqevldyyaaypdffrfrtvadlpadlewedgmdlpdlgspdavkggtqfgsvqdfprtlRHVGpDS--NGSFRP 95 
WP_052763490   4 FlrftvfiaglllasmswaepaplptklpdtlhwktnnddpifaspkakrggrfrsfitsfpltlRLVGpDS--NGSFAN 81 
WP_013159437   1 ----------------------mrrrviqafvgvgllaglalagpqdnslvvgtsqeprvlvgdfVNAISNQSIKFEIEN 58 
WP_041726111 185 wavgavtlayrpdiqiltyhtkegtvdptmaatraecayaiykimvppqvggqvvvaqtqepdalMSFATSMMAQRNIA- 263
WP_088874163  12 Qtrgaslfdfgfsrvwprhafaglvlvclaig--asaawsdqahaagkaesvvstavigswpvslHPLQGDEFGHVMAKR 89 
5U4O_A        73 HkVY-EN----LVQRD-KN--XDFKPXLAK--------EW----------KQ--I--DD-LN---WEFKLQQGVTFQDGA 118
WP_014957706 108 A-IL-DNql-fLISIH-PNt-GRILPELAT--------HW----------AF--G--EDkKT---MYFKLDKDARWSDGK 157
WP_044003124  59 L-TN-CS----LLCGDdST--QDFIPWLAE--------SFp---------AV--EqhGDtLL---VSYRLRPEAAWdNGT 108
WP_119678819  72 M-TY-RP----LTAYD-KD--WRLYCALCT--------ELpsrkngrirdVT--L--PDgRKavaVRFTLRPDAVWGDGT 130
NP_796551     73 F-IL-DEtp-gLVVRH-PDt-LEFIPELAN--------EW----------AL--A--GDnKT---VYFKLNPQAKWSDGK 122
WP_058023109  96 W-IL-DDvtlgLAHGH-PDveFAHYPALAS--------SW----------AI--D--ADtST---VYARLDPDARWSTGE 147
WP_052763490  82 Y-LR-ANnl-sLVGIH-PDt-LNPIPELAT--------HW----------AF--G--DDgHS---IFYRLDPDARWSDGT 131
WP_013159437  59 F-LL-PP----LIQTS-RD--VENMPVLVT--------EAptvankrvrfSN--L--PGgKRrleIDLTLREGAVWSDGT 117
WP_041726111 264 M-QYeDG----LIM-EfPN--GTVVPRMALnvpnfkdgTW----------TTykG--PDgKTwmkTTYYLRKGVKWSDGT 323
WP_088874163  90 F-VN-RP----LLEAG-PG---GLTCVYCV--------SVpsvadgslrtVR--D--SDgTWitvARYIMRPDVRWADGV 147
5U4O_A       119 PFN-AEAVKKNF-ERVLDPKVGS-N-R-ATVY---S-XIQEIKV--IDEYTVQFILKY--PY--S-PLLS-IFASNEGSI 181
WP_014957706 158 PVT-AWDYAYTL-EFMRSEHIIA-PwY-NDYYt--K-EIEAVII--YDEYTIGVKSTK--AVp---ELYL-KL-GIA--P 219
WP_044003124 109 PIL-ARDVAFTL-KVMNCPGLPI-E-MdQAMF---G-FVRDIKLhpTDSRRFTLVCLG--AS--P-DHIRtSGD-YS--I 172
WP_119678819 131 PVT-TRDVAFTW-EVGSNPAVGV-I-E-QDFF---TkDVVKLEV--ADEKTFILYRQP--NT--CtPENS-----KGLIL 191
NP_796551    123 PVT-ADDFVFML-KFYRSKDILE-PwY-NDYYn--K-TVADVIK--FDDHTFAVKAAK--ELnpE-ELLL-RMgALR--P 187
WP_058023109 148 PVT-VDDFFFMF-FFFQSDYIVA-PwY-NNYYgvgQ-VYNNITR--YDDLTLSITLNE--AKp---DLAD-RVlALR--P 212
WP_052763490 132 PVT-ADDYVFAL-KFMRSKFILA-PwY-NNYFs--E-VITELVK--YDDYTIGITGSV--AKpaD-EMLF-EI-SMS--P 195
WP_013159437 118 PIT-TDDVALYY-DFGKTKGVPT-T-S-PDYW-----DRVGLQV--KDKRNFTVTFEP--AY--FyDLDG-----NPIGY 176
WP_041726111 324 PVNyKDDINFAVfDIYLSGKIEQiP-T-TDpY---D-KIEKIEF--PDPYTMVVTWKDttPY--A----N--LG-LP--I 384
WP_088874163 148 AMT-TADVAFTW-EVLTSTGRGL-A-D-SDQR---IiNVKSIQV--IDERRFDVVYTG--SA--CsDQLS-----VP-PL 207
5U4O_A       182 LSPKA----ID----------E--------------K--------G-----K--G--L-AQ---H--------P------ 198
WP_014957706 220 TPEHY----FV----------Nlnd---------tfVq-------------R-----YnWA---I--------V------ 241
WP_044003124 173 LPEHI----LD----------Pegk--------lrtVplpqmtraAatpvvQafVkrY-QT---LrlakhperL------ 220
WP_119678819 192 LPEHVeraaYErdp--------------------anYk-------V-----Ss-R--Y-ESdttN--------Pg----- 222
NP_796551    188 RPAHF----YA----------NpkkdengdgihddfVr-------------Y-----YnFK---S--------E------ 218
WP_058023109 213 VPQHF----YK----------Elgd---------dfVe-------------R-----YqWR---F--------V------ 234
WP_052763490 196 VPEH-----FH----------Qlne---------twVr-------------D-----YnWR---V--------E------ 216
WP_013159437 177 APAHImraeWEkakaaaqgrdAagq---------aeVf-------R-----N-----F-FTqyaS--------Pqalnag 221
WP_041726111 385 YPKHF----YS----------Kvpl---------eqI--------T-----Ss-D--L-AK---K--------P------ 407
WP_088874163 208 LPAHLekpiWQsnp--------------------aeYf-------S-----Ns-L--Y-RTkpgT--------Pg----- 238
5U4O_A       199 --VGTGPYTF--KSWKPGEEIRLEK-NKNY--W-----G-E------K---------AKVDEVVFKVVPEDATRIGXIET 250
WP_014957706 242 --PNTGAYQI--SEFKKGKFIKFKR-KKDW--W-----AkDkkyfknR---------FNVDYVVFDVIRDSNLQWQYFKK 300
WP_044003124 221 --SGCGPYRV--SNWQNGRFLVLTR-KAKW--W-----A-D------AlpapprqlqAFPTRLIYQIIPDATTATLALRR 281
WP_119678819 223 --LWFGPYRV--TRVEAGASIVLER-NPTW--Y-----G-R------K---------PYFDRIVVRTIENSERLEQALLN 274
NP_796551    219 --PTTSAYYL--ADVKKGKSVTFKHvGEDW--W-----GyTnkyyenR---------YNVDKIRITVIRDSDIAMKHFEK 278
WP_058023109 235 --PTTGPYVIrdEDIIRGRSITVTR-LQDW--W-----AkDkkffrnR---------FNIDRTVMNVIRDTNNVFEAFKR 295
WP_052763490 217 --PNTGPYQI--SEVRKGKYVEFTR-KQHW--W-----AdKkryfqyR---------FNPEHIKVKVIRDINIAYQYFRK 275
WP_013159437 222 kmVYSGPFIL--KRWVPGNTIELVR-NPRF--FitppgG-A------D---------KYVQKVTYRIIQNTNSLLVAILG 280
WP_041726111 408 --IHAGPYKI--DQWVEGSYISLVP-NPYWfgWa----G-A------K---------PLIQKFVYQWIPDTNTMLMNVLA 462
WP_088874163 239 --LYSGPYRV--VAADG-TTLHLEE-NIYW--P-----G-Q------K---------PAYGKVDLLVPANQAALETAVRA 289
5U4O_A       251 SEAHIAe---N-LPVT--EV-ERVK--Ns---------pSXELIENEG-LGVEYIGFNV-------EKKPFDNPLVRQAI 304
WP_014957706 301 GKLDTFg---LtI-PK---YwHEK---SnislfqkgyihKIWF-FNDHeRSAMGMWLNQ-------DKEIFKDRRLCHAF 362
WP_044003124 282 GELDVYp---M-MPAG--EF-ARLQ--Ksaa-----aqqSLTFSSTDS-YDCLAVNFNV-------RQAVLRDASTRQAL 339
WP_119678819 275 GEVDYVsgeyG-FTVQ--RA-AQLEprQq---------hRFKILWQPG-FAYRHLDLNH-------DHPALGDVRVRRAL 333
NP_796551    279 GKLDAFg---LvL-PS---LwHDK---SntapyqkgyieKFWG-YNQYpVGAGGVWINT-------AMPLLDDLNIRKGI 340
WP_058023109 296 GDIDQFg---LnL-AE---HwYEKLp-DsdpdvaggyihKSVF-YNERpRPTYGLWMNT-------SRPLLDNQNVRLGI 359
WP_052763490 276 GELESFp---LlM-PH---FwHKK---AqgdiykqgyvgKIKF-YNDVpQPITGLFLNE-------DSKPLDDKLVRYGL 337
WP_013159437 281 GGIDASsg-vS-LTFDqgRA-PQLTrrAe---------gRFEVWFVPT-PFFEHIEVNQftnleqvKNLGLADKRTRQAL 347
WP_041726111 463 GKVDLTl--iG-LGSK--EA-QQAE--Ki---------pTIKVQKIPS-TFWEHFEINV-------TDPILSDVRVRKAL 517
WP_088874163 290 GKVDVFt---T-LTFD--VG-SRLArdLt---------nAYNAFYAPS-DFLVHLKVNF-------TNPILSDLRVRKAL 345
5U4O_A       305 AHAIETKGILKGVYNNV-GTEIN--SVX-TPKV-F-GY-TKDVKGYKYDINTAKKLLADAGY-----------PNG--F- 363
WP_014957706 363 AHAMNIEKVINNVLRGDyFRLSQafA-----GY-Ge-YtDDDIkprQYDIAKVETLMRFTGWqrgnd-giwqkG-EtrF- 432
WP_044003124 340 SYLFDAPTLNRATQQGT-ARLSA--GLI-SPRI-RqYY-YDSLPLPQFDSRRAAALFRKAGWqqqkaggwfrtTRQntPe 413
WP_119678819 334 LHALNRLRINDRLFYGR-NILAH--ADI-HPMD-R-GY-EKDVYRYPYDPVRAGWLLDQAGWragqd-girrnEDGvpL- 404
NP_796551    341 TYATDFDGMIENVMRGDySRKPNptG----FGH-Gk-YtLPDVkapKFEPEKAAAAFEAAGFdkigsdgirvnDKGqrL- 413
WP_058023109 360 QYATNWDLVIESFFRGDyARMQTssD-----GY-Ge-FsHPTLqarPFDIDRALEHFARAGFtergrdgilvnDQGqrL- 431
WP_052763490 338 AHALNVQKVIDTVLRGDyERMQTahE-----GY-Gd-YsNTDIrarRFDLAKADDYLDEAGWdkrgpdgirvkE-GerL- 408
WP_013159437 348 MYAINREAINKAFFEGL-QPIAH--SWV-FPQN-P-MY-NPNVRRYEYNPDKARALLAELGWkpgpdgilqrtVEGktV- 419
WP_041726111 518 AYGIDYDDLNMRVHLGV-RKNLY--YPYiA-LFnE-FYrNPKAVMPKYDPAMANKLLDEAGWkmgsd--gyryKDGkkL- 589
WP_088874163 346 LFSLNRDALVSSVLEGK-GTVAQ--SLL-SPFM-P-GY--APVSRYPFNLTKANQLLDAAGWvrgrd-gmrhnISGvpL- 415
5U4O_A       364 KTTIW--TNds---kVRXALVEVIQSQLKGIGVDVEIKVXEYGAFLAA----T--NKSEHAXFvgGW-G-NA---TG-DG 426
WP_014957706 433 --SVK--VTyd--heDYTPRLVVLKEDALKAGIELLLERLDSTAMFKK----F--LEKKHDVAw-mGwStn---iRP-AY 495
WP_044003124 414 ALQVRlhYRag--epAFETIGLQFRAAAATLGIPVELHPTEQ-SLLTRq---V--RAGATDITlrTI-T-GN----P-FS 478
WP_119678819 405 EIELW--AGag--drTIELEQQFIEDSWRQIGVRTILKNATARVLFGEi---Lq-ERRFNGAAlfSW-IsLP----H-DP 470
NP_796551    414 --SFE--LTys--spVHTPRIAFLREQAKLAGLDIELKLIDGSSMFKY----V--REKKHELAf-fDmGts---eIP-TY 476
WP_058023109 432 --AFT--LTtg--yeSLSDILTILREEAARAGLEFRIEVLDQTAGWQK----V--QEKQHDIAf-tAfG-VSvemYP-RF 496
WP_052763490 409 --SIR--ITyy--nsGHNDRLVILAQEARKAGIELKLNLLDASTAFKQ----I--LENKHQAAw-mAwS--GaglSP-RF 472
WP_013159437 420 RFELE--YQttagnaVRERIQQFIQDNLRQVGIAVKINNAPSAVVLGPnrarAq-DGAWTGFLqfA--FsMG----L-QD 489
WP_041726111 590 TLELS--TTtr---qDRKDEAVVLQAQLKKIGIDIQTKFLAASYFFGT----Yt-THRMFQLAmfAW-G-GD----PlDP 653
WP_088874163 416 RFELR--YRgn--hpWPQLAPRLAE-AWQAVGAQVDLVEDAA--LSGDa---VdtTQRYSGLVgfS--QsLE----G-GL 478
5U4O_A       427 DYnQYNLF-H--------SSSh------------gAtGNQFFYSNPEVDKLIEEARKE-KDETKRKELYKQLQEIELKDA 484
WP_014957706 496 WQgWHSDN-Ahk---------------------pqT-NNITNTDDPLLDELIDKYRAT-LNQEERITLSLNIQKVIHEIG 551
WP_044003124 479 Yd-FTPLL-H--------SRGi------------gA-SNTSGFSTPLSDQLIEQIATT-EDPARKRKLLRKFQQLLQQER 534
WP_119678819 471 Qd-tV-L--H--------SRQiptae-----ngwsG-QNFLGYSNPRMDRILDQIGQV-CDPSANQALWSEMQTLYAEEL 531
NP_796551    477 WEyFHSVN-Ank---------------------pqT-NSFTNYSTPELDEKIIAYRFN-MDMDKKIQLGHEIQRDIIDAH 532
WP_058023109 497 WEtYHSAN-AydnaflsdGTVnpere-----vkvqT-NNLEMLADYEFDQMIEQYDRS-SDRDEMLDLAHRMTAYHHDYA 568
WP_052763490 473 WEfYHSTN-Ahk---------------------pqT-NNVTNTDDPVMDEKIMAYRKA-TDKATRVRLAHELEQMIHDQG 528
WP_013159437 490 Dg-vR-SAcR--------DEEgkqifvptkengyrG-TNFGGWCNADFDKLRAQAVVE-FDVAKRKALFAQMQAIWAEEV 557
WP_041726111 654 GGf--TLY-H--------SSQiptee-----ngwqG-QNYTGISDPTLDDAIYKATHE-VDPAVRQKNYYIAEQRIVDLV 715
WP_088874163 479 Ea-aR-FWfH--------STMipnaa-----ngkrG-NNYFAVRIKTLDDALDHLTQAgCAVDPRRDALTEVQKAYADDL 542
5U4O_A       485 LLVPIRGINHIAATTKNI-K-----GF--WI---------DPS----------G--------------YLRLEGVEL-Q 521
WP_014957706 552 AFVPTFMVP-YVRQAYWrwL-----ELpeFHgtkrsdslfDPfsvttgglfwmNtdkkdqt----lkamkndIQFEP-V 619
WP_044003124 535 PFTVLYFLPYRIAAAKRL-GklpvtGI-------------RPg--------------------------YAAARIRpvT 573
WP_119678819 532 PALPIFFLSQPYFMPLWL-E-----Gv--EP---------TGH----------Qfe-----------stMGIENWRR-A 571
NP_796551    533 VIVTGYMVP-YVRYGHWrwL-----KLpeKPmnrmtealfSGgiigd-gtywiDkdvkket----qkamksgKTFEP-V 599
WP_058023109 569 SFVPGFVQD-FYRVGHWrwV-----RYpdFFnhrqsgna------telhvhwiDtqmkeqt----laarssgQTFEP-Q 630
WP_052763490 529 SYIPTFKVP-YTREAFWrwL-----KLpaFHgtrtsdqlfSPmggsg-glfwiDedekdrieamkddgE--KLRPAP-L 597
WP_013159437 558 AMIPLYFQADPRVFRKGL-V-----NWv-------------SS----------Tfas---------sgSPTVEPWLI-G 597
WP_041726111 716 PQVGLNLWTDVYTPKKNL-Am---aGF--DYvm------sSSi----------Gyt--------------ynSELWYwE 758
WP_088874163 543 PALPLWFGTVITLANKRI-D-----GAv-D-----------AR----------Tfa------------saPVEYWHP-R 580
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