Conserved Protein Domain Family
zf-RVT

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pfam13966: zf-RVT 
zinc-binding in reverse transcriptase
This domain would appear to be a zinc-binding region of a putative reverse transcriptase.
Statistics
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PSSM-Id: 433612
Aligned: 96 rows
Threshold Bit Score: 54.9713
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WGS:AAAA:OsI_11988  449 FSVRSAYKLAWTMNNVVssssstsMDgERKLWqniRKADvQPKVKVFACKLAQNRLPTWENKRKRQIEARG-TCP-ICGQ 526 
NP_176271           109 FSSARTWDAIRPRAPEL-------DW-AKAVW---FKGA-VPKHAFNMWISQLDRLPTRQRLASWGHI-QSfDCC-LCTI 174 
Q3ED23               30 FSSAKTWAALRPRSDVV-------SW-AKTVW---FKGA-TPKHAFHMWVTNLDRLPTKTRLASWGMQLQT-TCG-LCSL 95   thale c...
VDC79670             34 FSTKHTWEFLRPRGPVQ-------DW-TATVW---FKGS-VPRHAFHFWVTQLDRLPTRTRLASWGLPIDQ-SCC-LCGN 99  
Q3E9D7              109 FSSRDTWEQIRVHSPTV-------PW-AKVVWf--KEYI--PRFSLITWMSFLERLPTRDRLRGWGMN-IP-SSWvLCSN 174  thale c...
Q9S9V5              111 FSAPRTWSALHPQSHTV-------PW-HKAVWf--KNHV--PKHAFICWVVAWNRLHTRDRLQNWGLSIPA-ECL-LCNA 176  thale c...
Q1G3F8              126 FSSAATWIHLNPVGEKV-------DW-HKAIWf--KGRI--PKHAFISWVNIRHRLPTRDKLLSWGLHVPS-LCL-LCNA 191  thale c...
O64724               25 leaTATWLHLNPIGERV-------DW-FKAIWf--KGKI--PKHAFIAWVNMRHRLHTKDRMISWGFIFPP-LCL-FCNT 90   thale c...
1_pfamImport          1 FQTGAIYDLLRPSTPTV-------PW-HKEVW---FSGG-IPKHMFLVWLMVKNRCPIRDRLLSWGLQTDP-RCL-YCNV 66  
VDD19910           1329 FSSSAVYNSFFEHSPIV-------PW-HPIIW---IKKG-IPKHKSLAWIMLLNRSPTRDRLLSWGLQTDP-RCL-LCNL 1394 field m...
WGS:AAAA:OsI_11988  527 VeESGFHATVECTKSKAL 544 
NP_176271           175 EtESRDHLLFSCEFAAQV 192 
Q3ED23               96 DiEDRDHLFLTCEFACFL 113  thale cress
VDC79670            100 AlENRDHLFLRCEVSQYL 117 
Q3E9D7              175 GdETHAHLFFECSFSLAI 192  thale cress
Q9S9V5              177 HdDSRAHLFFECQFSGVV 194  thale cress
Q1G3F8              192 FdETRQHLFFDCVFAGEi 209  thale cress
O64724               91 HdETRQHLFFDCEFAREV 108  thale cress
1_pfamImport         67 AdESIAHCFFECNFAWDV 84  
VDD19910           1395 SdESRNHLYFECPFSIAI 1412 field mustard
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