5GAH,3NDB


Conserved Protein Domain Family
Ffh

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COG0541: Ffh 
Signal recognition particle GTPase [Intracellular trafficking, secretion, and vesicular transport]
Statistics
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PSSM-Id: 440307
Aligned: 710 rows
Threshold Bit Score: 435.604
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5GAH_i         1 MFDNL-TDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVR 79 
WP_006689022   1 MFKAMiGSIVSKQMSKKLKNATIVEEDIKELLSEIRIALLDADVNLLVVKKFIKNIKEKTIGLYVEANQKPADLVLKIIK 80 
WP_011412349   1 -MSIL-GEGLQKVINKIRGKKILEQQDIQNIMQDIKVSLVESDVHLQVIDKFNEIIEKKTLKQEVLKGLNNKEHIIKIVN 78 
NP_109749      1 MFKSMiSSIVMRSMQKKINAQTISETDVQAVLKEIRIALLDADVNLLVVKNFIKAIREQTVGQTVEPGQDLQKWLLKVIK 80 
WP_012359252   1 -MSIL-GDGFQKIINKIRGKKIIESRDIENIMEDIRLSLIEADVNIKVIDTFHELISKKSLKQEVLKGLKPKEHIIKIIN 78 
WP_016338729   2 IGDFL-ANRLKKSIEKNLKKSTLTDETVQETLREIRLALLEADVNNAVVKDFIKAVEAKAKGEYINDGLNASQMMIKIVH 80 
WP_011183377   3 FGDFL-TKRMKKSMEKNIKKSTLTDENIQETLREIRLALLEADVNVEVVKELISKIKEKTVGEYIQEGVTSHQQMLKIVH 81 
WP_025208565   2 AFNFM-QKRLEKVIHKVQSKGLLSKENISEILKEVKLILLESDVNLKVVDDFISSIEKKAIGKVVDTDRTSSQEILKIIY 80 
WP_025734575   3 FGDFL-SKRMKRSIEKNIQKSTLTNENIAETLKEIRLALLEADVSVDVVKELISRIKTKAEGGYIQEGVKAHQQMVKLVH 81 
WP_106874072   1 MFESL-ASSFNKILNKIAGIKKISSQDLDITLGEIKAILIDADVAVSVVDDFIVKVRSKALGQEVLKSLTPGQMIVKIIN 79 
5GAH_i        80 NELVAAMGEENQT-----LNLAAQ-PPAVVLMAGLQGAGKTTSVGKLGKFL-Re-KHKKKVLVVSADVYRPAAIKQLETL 151
WP_006689022  81 DELVEILGKENKP-----VNTA-K-SQLKIMMVGLQGSGKTTTTGKLANYF-Kn-KYNKKPLLVAADIYRPAAIDQLRTL 151
WP_011412349  79 KTLIQILGSTRVD-----LTFKPNcNLNTLMLIGLQGSGKTTTAGKLALWL-Rk-KNSKKVLLVACDIYRPGAIEQLKVI 151
NP_109749     81 QELINILSQPNQE-----I--TSK-RPLKVMVVGLQGSGKTTTCGKLAVWL-Kk-QFQQKAMLVALDIYRPAAIDQLATL 150
WP_012359252  79 ETLTQILGSTRSD-----LVVQPKpHLNAMMLIGLQGSGKTTTAGKLALWL-Rk-KNHQKVLLIACDIYRPGAVEQLKVI 151
WP_016338729  81 EELINIFGKTAYE-----LNLLA--KPAVIMMVGLQGSGKTTTTGKIAKLI-Ek-KYHKKPLLVACDIYRPAAIDQLKTI 151
WP_011183377  82 EELIDILGTEKAP-----LNLSK--KPSVVMMVGLQGSGKTTSSSKLAHYL-Ak-KEAKKPLLVGLDIYRPGAIDQLVEL 152
WP_025208565  81 DELVNILGKEAKT-----WNYQS---RSVVMMVGLQGSGKTTTVAKLANNLvKkqKKYKNPLLVALDIYRPAAIDQLETL 152
WP_025734575  82 DELIEILGKELAP-----LDLGK--KPTVIMMVGLQGSGKTTTANKLANLV-Rk-KNSKNPLLVGLDIYRPGAIDQLVEL 152
WP_106874072  80 DELIKLLSSDEGEgdeggIKLKSN-KLNTVLMLGLQGSGKTTTSAKLASWF-K--KQLKKVLLISTDVYRPAAREQLATL 155
5GAH_i       152 AEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAAN 231
WP_006689022 152 AKQVRVDFWE-EGTQRPDLIVKNALNKADENENNLIIVDTAGRLQTNEELMQELVNVKKTLNPDEVFLVVDAMAGQDIIN 230
WP_011412349 152 GKQINIDVFS-KLDADVLDIVDAGLKHASQEGYDAVIIDTAGRLDTDETMMQELQQIKAKADPSEILLVVDCLSGQQSAN 230
NP_109749    151 AEQTESVFFA-KGTQAPDQTTKEAVKTFKESGCQAIICDTAGRLQTNQELMDELVAIKNELHPDEILMVVDGLSGQEIIN 229
WP_012359252 152 GRQIKIDVFS-QGNTPVIEIVELGLQYAQKNGYDAIVIDTAGRLTIDEKMMQELKEIKSKCDFSEVLLVIDALTGQQSAK 230
WP_016338729 152 GQNLGVEVFE-RGTQNPVLTAQQAVEYAKEHKHDVVLLDTAGRLHIDENLMQELKEIKNNVSPSEILIVVDGMTGQDIIN 230
WP_011183377 153 GNKNNIPVFE-QGKQSPLKTAKQALEFAEKNGHDVVILDTAGRLQIDKDLMNELNDLRKITSPNETLLVVDGMIGQEIIN 231
WP_025208565 153 AKKIDFPFYAERNEKDVIKIAKNALKLADKNNHDLIILDTAGRLQTDQKLMDELKEIKKIFIPTDIIFVADGFSGQEILN 232
WP_025734575 153 GHQSNIPVFE-KGKQDPIKTAKQAIEYANQNNHDVVILDTAGRLQIDKDLMNELNELRKQTNPSEILLVVDGMIGQEIIN 231
WP_106874072 156 GQSLGVDFFS-SNSNDPIEIAKSGLKYAQDKGYDVAIFDTAGRLQIDERMIQEARSIKEICQPQETLLVVDSLSGQSAAA 234
5GAH_i       232 TAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKV 311
WP_006689022 231 VATEFNNWLKLTGIIVTKLDSDARAGAVLSLTSLLNIPIKFTGTGEKIGSIDSFYPERMADRILGLGDIMTLAEKAADVI 310
WP_011412349 231 TAQSFHNQLGATGVILTKMDADTKGGAALSVRAMTDLPLKFVSSSEKIDSLEPFNPDRMASRLLGMGDILTLIETFTDKI 310
NP_109749    230 VAKEFHNRLKLTGFIITKLDSDARAGAALSLTSLLEVPIKLMGTSEKLTGLEQFHPERIASRILGLGDVMTLVEKAEEVF 309
WP_012359252 231 NTQTFHQQVGATGVILTKMDADTKGGASLSVRVMTELPLKFISSSESIDLLEPFNPDRMASRLLGMGDVLTLIETVTDKI 310
WP_016338729 231 VASEFNDLLKLTGVVVTKLDGDARGGAALSITHLTKLPISFIGTGEGMSNLQIFYPDRMADRILGMGDVQTLFEKAKDVI 310
WP_011183377 232 VTNEFNNQLKLTGVIVTKLDGDARGGATLSIRYMTKLPIKFIGEGEGVSALAPFYPKRMADRILGMGDIETLFEKVVDNI 311
WP_025208565 233 VAQEFNNKLKLSSVIVTKMDSNAKGGAIFSLAYALKLSISYLGVGEKIANLEIFYPNRIASRLLGLGDIETLTEKAQELG 312
WP_025734575 232 VTNEFNRLLKLTGVIVTKLDGDARGGATLSISHMTKLPIKFIGEGEGIKALAPFYPKRMADRLLGMGDIETLYEKAIENI 311
WP_106874072 235 VAKKFHEELNISGSLLTRIDADNKGGAALSIKAITGQPIKFLGTGEKTDALEPFEPKKIAERILGMGDLQALVKEAEKVI 314
5GAH_i       312 DRAQAEKLASKLKKGDgFDLNDFLEQLRQMKNMGGXXXXXXXXX-XXXXXx--xXXXXXXDDKVLVRMEAIINSMTMKER 388
WP_006689022 311 DEKQVRGSMQRMMAGK-MDLEDLMRQMSQISKLGSFSGIAKMIP-GLNNIs---eNQIGDAESKMKIWTILLSSMTLKER 385
WP_011412349 311 DPHQSKQMMEKLFDDS-YNYYDFQKQLKTLKKMGSFSKLLSFIP-GLGCKik-qL-SANLGDDGFNKFEVLIQSMTKQEK 386
NP_109749    310 DKQSLTKTVSKMFLGK-MDLEDLLLYMEQMNQMGSVSSIVKMLP-GNLTVs---dDHVESIEAKVKLWKVLINSMTREER 384
WP_012359252 311 DADQGKKMMDRLLDDN-YNYHDFQKQLKTLKKIGSFSKILSFIP-GLGNKmk-qL-SSGINDDNLKKFEVLIQSMTKEER 386
WP_016338729 311 DERDMKKTMNRMMMGQ-FDLQDLLNQMRQISKMGKMGGLMKLIP-GMPKVs---dEKIADAERKLKVTEVLLSSMTIKER 385
WP_011183377 312 DERSMQKTMKRMFMGQ-FDLEDLRNQLVQVSKMGNIGGIMKMMP-NA-KIs---dNQISDAQRKLVVFSILMDSMTLKER 385
WP_025208565 313 DEKSQEKMFRKMMSGK-FDLDDLLVSMQQMSKMGNLGAISKLLP-SFGKLgkiseEKINSMETKLDIYKVLINSMTKKER 390
WP_025734575 312 DERSIQKTMKRMFMGQ-YDMEDLRNQLVQVAKMDNLGGILKMLG-GQNKVn---eDQINDAQRKLVVFSILMDSMTLKER 386
WP_106874072 315 DKEKAEEAAKKIQSGK-FDLDDYLDQIKNLSKMGGLSKIMKFMPaGISGMqn-rMKSLGFDDDSLKKQEAIICSMTKKER 392
5GAH_i       389 AKPEII--K--G-SRKRRIAAGCGMQVQDVNRLLKQFDDMQR 425
WP_006689022 386 RDPRVF--KkeP-SRRIRVLKGSGRSPDELNKLLKQWEVSRD 424
WP_011412349 387 KNPQLIvlS--S-RRRQRIAKGSGNQLSDVNKLITLLEQQKK 425
NP_109749    385 RHPKLI--NrdP-SRKQRIIKGSGRKMDELNKLMKEWSKLQT 423
WP_012359252 387 KKPRLIalS--G-RRRMRIAKGSGNQLSDVSQLMTLLEQQKK 425
WP_016338729 386 REPRLL--K--HlSRKNRIIKGSGRSEKEYNELINQFEKTKK 423
WP_011183377 386 REPKLL--K--SlTRKNRIISGSGRTEKELNELINSFEKGKK 423
WP_025208565 391 KNPRLL--Kh-Q-KRKERILKGSGRSAQEYNDLLRQFEKMQK 428
WP_025734575 387 RDPRLL--K--GlTRKSRIIKGSGRNEKEFNELVNSFEKGKK 424
WP_106874072 393 RDPERI--T--M-SRKKRIAQGAGVKVSDVDNLLKHFAKIQD 429
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