4ILU,4L5G


Conserved Protein Domain Family
CdnL

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COG1329: CdnL 
RNA polymerase-interacting regulator, CarD/CdnL/TRCF family [Transcription]
Statistics
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PSSM-Id: 440940
Aligned: 286 rows
Threshold Bit Score: 95.584
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4ILU_A         3 FKVGDTVVYpHHGAALVEAIETRTI--KGEQkeYLVLKVAQG--DLTVRVPAENAEYVGVRDVVGQEGLDKVFQVLRAPH 78 
WP_012743387   2 FEIGDYVLNaTNGICKISEIVELDMsgDKQLksYFLLRPVEEe-NDRVYIPVDNADK-RIRKVITQDEALAVLDRVPEIE 79 
WP_081441762  12 LNIGECVIYgSHGLCQVREILVPSFleRGKEkqYYMMISAVDa-GSVLYVPVEGAED-KIREVTGADNAEDLIEDIEEVD 89 
WP_008404966   2 YKIGDLTFYkSHGICQIEGIVEQNF--TGEPmlYYVMQSKIRp-GVTLYHPVESKNS-QLEKILSYDEAVQIMDCFSNEP 77 
WP_068445219   2 HDIGDLIIYsGHGICRVDDISDKNL--NGSVkkYYVLRPIEDnhQLTINTPADNSKI-KIQNLIRKSEAEIILTSFQSNG 78 
WP_006828653   2 FTIGDHIIYsAHGLCRINDIRDETV--SGVTkkYYKLHPLENt-LVTISTPVDNDKV-VMLKLLQKEQALEIIEIFKQPG 77 
WP_016838466   2 YQVGEYLLYgGHGVCVIDDVAEKLF--SGKEklYYVLHPISYp-DLKLYYPVDGDQS-KLKKMLSAEEAKNLMNIFKQPA 77 
WP_058257445   2 FEIGDYIIYgNHGVCRVEDIGGLNIpgVDQSkkCYTLQPVFSk-SSTLYTPVDNDKV-VMRRVISNEEALELIEQIPDIS 79 
WP_106788848   2 FKVGDYVAHyKEGVCEVIDVGKLEMscSDREkeYYTLKPLYDa-GGTVYTPVNNEKR-QIREIISAKEARTLIEQLREAE 79 
WP_009304587   2 YACGDTVVY-RHHVCEVAALRENYF--EGKD--YLELRALFEn-SLKLFVAVDEATPDNLRPIMSKRAALALIDSIVDAD 75 
4ILU_A        79 T----------EEPTNWSRRYK-ANLEKLASGDVNKVAEVVRDLWRRDQE-----RGLSAGEKRMLAKARQILVGELALA 142
WP_012743387  80 A----------LAVNNEKERET-RYKEAVRSCEPDSVISLLKCLHIRNEQraqagKKSTAVDERYGKMAEHNLNAELAFV 148
WP_081441762  90 E----------ILLPEGKKAEP-AMLEIIKRNDVEEMMGLVKSLRKIKATreaqgKRFATLNERYLNLAEKLLYTELAYS 158
WP_008404966  78 S----------EWNDRSTNRQR-NHAEILSANNHLEAAQLMNTLLRKDLElqkdeKKITSQDSQILQQLSTIILDVLEIA 146
WP_068445219  79 I----------DWIDNSHSRIR-QYKNTVDTGNRVEIAKIANTLMRKKDAleaegKKFFEQDNKLLASIQNILFKELSIV 147
WP_006828653  78 A----------ESDSQSNSKPL-PSKN-INTGDRMQIAEVVNTLMRKKFDtqlqkEAFYAHDYKLLNNTQIILFKELAHA 145
WP_016838466  78 K----------EWIEKNTDLNQ-FFNSVISSENRKELAELLNTLLRRKLQfenegKKLPIQETKLLEEASNLLYNELAIT 146
WP_058257445  80 L----------IGVENDKQREE-AYKEALRHHDCKDWIKIIKTLYVRKQErlsqgKKLTFTDEKYLNIAKDCLFGELSIA 148
WP_106788848  80 D----------LQIADEKKREV-FYKEALLSNQCQKWVAVIKTTYLRREKrlacgKKAVGMDERYLSSAERFLTGELATA 148
WP_009304587  76 TidenalkpdaPTPTLLERRMKeEYDKRLRTFAPEDLVPIMKSVHERTVRrvdsgRRITATDKKYFDLAEGLLCDELAVS 155
4ILU_A       143 ESTDDAKAETILDEV 157
WP_012743387 149 LEKDKQEIKDIIHDM 163
WP_081441762 159 LETEKETIKRRVLEM 173
WP_008404966 147 LKKPKDTIEKEIYKR 161
WP_068445219 148 LDTTIEDIHEKVNQN 162
WP_006828653 146 LDTSFEEINKMINDL 160
WP_016838466 147 LSTTKDAISKQINEM 161
WP_058257445 149 MDMNREEVEDLISER 163
WP_106788848 149 LKKPRAEIKEYIIEQ 163
WP_009304587 156 LAVPRENVKDVLVER 170
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