Conserved Protein Domain Family
7tmA_OR2D-like

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cd15428: 7tmA_OR2D-like 
olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320545
Aligned: 4 rows
Threshold Bit Score: 408.021
Created: 12-Dec-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NGH3        41 ILLFILFLIIYLLTVLGNQLIIILIFLDSRlhtPMYFFLRNLSFADLCFSTSIVPQVLVHFlvkRKTISFygCMTQIIVF 120 human
Q9H210        25 QLLFIVLLGVYLVTVLGNLLLISLVHVDSQlhtPMYFFLCNLSLADLCFSTNIVPQALVHLlsrKKVIAFtlCAARLLFF 104 human
XP_003758427  25 MYLFLLFFIVYLMILMGNLLIVLLILMDTClhtPMYFFLANLSILELSYTTCVIPQMLGHFlaeRKSISFfrCAAQFYTF 104 Tasmanian devil
ETE62331     141 IALFVTFVFIYLMAMIGNLLLVLLVIVDSHlhsPMYFFLSNFSVLEACYTSTVVPQMLSHLlseERIIPLirCGIQLYFF 220 king cobra
Feature 1        #  #                                            # #####                         
Q8NGH3       121 LLVGCTECALLAVMSYDRYVAVCKPlyYSTIMtQRVCLWLSFRSWASGALVSLVDTSFtfhLPYWGQNIINHYFCEPPAL 200 human
Q9H210       105 LIFGCTQCALLAVMSYDRYVAICNPlrYPNIMtWKVCVQLATGSWTSGILVSVVDTTFilrLPYRGSNSIAHFFCEAPAL 184 human
XP_003758427 105 LFFGIAECYILSVMAYDRYVAIRDPlrYSVIMnWGFCGGLAAGCWVGGFIASTVDTMAtfqLSFCRENVINHFLCEMPAL 184 Tasmanian devil
ETE62331     221 LSFGITECFLLSVMSYDRYIAICLPlhYSLTItKKVCISMATVSWVGGLFFSAINTAFtlnLSFGNHNKIDHFLCEMPAL 300 king cobra
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q8NGH3       201 LKLASidtYSTEMAIFSMGVVILLAPVSLILGSYWNIISTVIQmqsgEGRLKAFSTCGSHLIVVVLFYGSGIFTYMRPNs 280 human
Q9H210       185 LILAStdtHASEMAIFLMGVVILLIPVFLILVSYGRIIVTVVKmkstVGSLKAFSTCGSHLMVVILFYGSAIITYMTPKs 264 human
XP_003758427 185 LHLSCtdtSHVEMVMNVLCIFTLVCPVTFITFSYAHIINVVLHiqsaQGRRKAFSTCSSHLIVVMVLYGTVLSLYIRPRs 264 Tasmanian devil
ETE62331     301 VKIASgdtHQAKMCMSISCLFTLVLPLLLILASYTRILYSIFGkgslTGKHKAISTCSSHMMVVSLFFGSVLSIYMQPKs 380 king cobra
Feature 1           ## ###  #  ##                     
Q8NGH3       281 ktTKELDKMISVFYTAVTPMLNPIIYSLRNKDVKGAL 317 human
Q9H210       265 --SKQQEKSVSVFYAIVTPMLNPLIYSLRNKDVKAAL 299 human
XP_003758427 265 lsSPKYDKIISVFYVAFTPIFNPLIYSLRNKEVKMAL 301 Tasmanian devil
ETE62331     381 stSKEYVKMASVFYIIITPALNPLIYSLRNKEVTHAL 417 king cobra

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