Conserved Protein Domain Family
FimB

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COG0582: FimB 
Integrase/recombinase, includes phage integrase [Replication, recombination and repair, Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 440347
Aligned: 569 rows
Threshold Bit Score: 92.0239
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_007893402   1 MTKYPTGVENHGGTLRIWFIYKGARVRENLGVPDTPKNRKMAGELRTSIGYEIKTGTFNYASRFPSSPNLKRFGFVRQGV 80 
WP_011288258  25 GGLIGSVRCGANGASVYFDWRYRFDGKVKQIAVGAWPKLSLASIRSERDRLKVEVDGGSDPTERRKAERLKVKVDQLEEI 104
WP_011313187  32 IRPHGTKTWVIEYEFQGRRTKYTIGSYSRNGAPGESIPDWLGHGQQSLTQARSIAGSWKAARRGGHDPAAEWEALQAKEK 111
WP_011366032   8 KFIQNLKPEAKKYYIRESRGFAIVVHPSGIKNPKGTKTFLYIYTINGKRKELKLGNYPEVTLKDARIKHGEAYARLVNGE 87 
WP_083769700  14 DTKIRNAKTETDTCLSDGNGLSLRIYPKRGKIARTWVFRYRRPATKKPAKLSLGDYPVISLRAARQQAEIMRQQLFEGLD 93 
WP_013722265  30 SPAITRVTEAGGLYGVVKRLKDGSASVWFRWRFRHGGKLVDFTAGSWPGDSLATIRQAHEWAQSEVKAGRNPNATRQLSK 109
WP_009206143  25 GSLYGTVKARTDGVSVLFRWRYRFGDKTKDFTCGTWPKNSLADIRAARDKARRILDDGKDPSEEKRISRLKSQAEQAEAV 104
WP_032124678  47 YVRDSQVKGLVLRVKPTGSKSWIFCYTVPCHKRKWRERKKGLGCFKGGRTGVAGVSVKTARTEAERMKHEVRHHGADPVE 126
WP_087447257   6 RQIQHAKTDRADLFLNDGKCLYLRVRLSGSKTWLYRYKATDNKTQWFDLGLYPGLSLNDARLKAAEQKVKRKDGIDPVRE 85 
WP_130538582  18 VKKTSRATSFIYRYKNFEGKMKQIMLGVYPEIGLADARTKLQEFKALRASGYDPQQYLIDQESRLKAAELEARLASEKLG 97 
WP_007893402  81 TLG-------------------ELAAR-WLE-L-K--KM----EIt--K------NAHLRYVSYITIATDILGASRTVSS 124
WP_011288258 105 EKQqkrldeiva--qqtrltvrGLFEH-WAE-V-D--LI----RRk---------DGGKEVRRMFEKDVLPKLGTLLVTD 164
WP_011313187 112 QAAaelqaaqka--eqqqptvtNAIDS-FMQ---Ki-MAg--------K------KSAPAIRYRLDr-LAALLGDKKIRD 169
WP_011366032  88 DPVtppvikaep--qdenltfgHFTEL-YLQw--S--KD----NHs--P------KWHNTIKCALNKDALPVWEYTLIAS 148
WP_083769700  94 PQYvqkeqrae---nanaittqQLFES-WLT-L-Q--KSa--kEVt--Drt--laDHEARWRVHLEK----SLGPLLAKH 155
WP_013722265 110 VQEaqtqaeqir--iheketveALALK-WQS-V-E--LT----KRvsgEqetgrfDNGVELIRSFTKDVFPAIGSKPVQA 178
WP_009206143 105 GLEqaritdaet--hkarltvlGLFER-WEK-L-E--LQ----RRk---------DKGAEVRRSFEKDVLPVLGAVAAAD 164
WP_032124678 127 DKRkraaevire--qasrvlvkDLFER-WAN-T-D--LV----NRk---------DKGAEARRMMLKDVIPSIGELNIKE 186
WP_087447257  86 KKDeakrkaaematqqarmtvlDLFEG-WEK-R-E--LK----NRk---------DKGAEVRRSFEKDVLPALGALPAEE 147
WP_130538582  98 FTFkamvd----------lyltEKVEDrYSEpDrKgnRKiilgSRk--E------KGQKEVRRTLYGDVVRVLGDKPVSE 159
WP_007893402 125 LNNEDMLRLRKELLtgnqivsnnqksrlskkGRTVRTVNVYMSTMGSMMRFAELNGYID---KSPMtGIDP--LR-K--- 195
WP_011288258 165 VKKGHITLVTDPLLa----------------RGVNRMAKLVFSLVRQMFRFAVDRDYIE---ADPTaSIRKvkIG-G--- 221
WP_011313187 170 VTRQDVIAALDTIAegl-----------regQTAKQLAGEVLTQAKRVWRFARAREWVL---VSCVeELTRrdFD-A--- 231
WP_011366032 149 IKRRDAIAFLENVAr----------------RGIQ--VINLHKATSSVFDYALEREYIE---SNPMaGLKAktIP-Al-- 204
WP_083769700 156 VIRRQIAAVLDSMVa----------------KGIKEETRKCLCLLKMLFRFAEERHLIK---ENPIeGLSAksFKiT--- 213
WP_013722265 179 VTKTDCLHILNSVKe----------------RGALRMANRLLNDLTQFFNWCRVMGYIT---TSPLeDVRRkhVG-G--- 235
WP_009206143 165 VTRSMVVGVLDSVVe----------------RGARIVARNLLGDMRQMFGFAIVRGLVE---NDPTsRLKRddF--G--- 220
WP_032124678 187 VRKGHITEITDQLLq----------------RGVNRMAKVVFSLIRQMFRFAVTRDLLE---FDPTaAISKttIG-G--- 243
WP_087447257 148 VTRSMVVAVLDSVVe----------------RGAPIVARNLLGDIRQMFGYAIERDIVE---QDPTsRLKRdsF--G--- 203
WP_130538582 160 TPLIEVKVMVDQIIa----------------RGANVQAGNVLRELNLAYRFAISNDRLPpnfQNPCpEIKTr-IKdSgvk 222
WP_007893402 196 -SR-SEPEPL---------TKDEYERLLTACP---Se-----QIKNLWILAINTGMRHGEICALAWEDIDM---V----- 248
WP_011288258 222 -PDtERERVL---------SRAEIQTLRHQLP---Sarl-mpQTEAAVWIVLATLCRIGELSSAKWSDIDL---D----- 279
WP_011313187 232 -KPrKRDVTL---------RFDELVVVWRTLDdprKcka-dpVTVAAMKLLILTGQRESEVCEAPWKEFDL---A----- 292
WP_011366032 205 -KPkARERFL---------SDSEIKHVWKAID---Egpg-ydETKRALKLIMVTAQRPGEVAAMHRREIQTgvgKprcki 270
WP_083769700 214 -AGaPRDRAL---------PLSELRSFWRLLD---Sasi-tpATANAFKLLILTGARRGEVTMMRWSELDL---T----- 271
WP_013722265 236 -KAtPRDRVLwdvsptttqPEAELQELHSRLP---Sarl-qrESELTIWILLSTMARVGEIAKAQWKDVDL---T----- 302
WP_009206143 221 -KKvERDRIL---------SDAEIRALPGKLK---Aarm-teSSTAAIWIMLSTCCRVGEISRAEWKDIDL---E----- 278
WP_032124678 244 -ANvERDRVL---------SEDEIQELAVKLS---Sagl-anTATIAIWLVLGTCCRIGELLKARWSHFDH---N----- 301
WP_087447257 204 -KKvERDRIL---------SEMEIKGLPHKLK---Tarm-teSSTAAVWVMLSTCCRVGEISQAKWQDVDQ---N----- 261
WP_130538582 223 iSNgKRQRVL---------TELELQKLWQWLP---TtqflspTVKDVLKFTLLTGMRTGEVCVVQWSDVNL---K----- 282
WP_007893402 249 -N--WTITVSRNmaiknhftPPKTEsGNRVINLTLPAIEALKSQMAYTRmgkqhhievnlrefgrtrmdlC-TFVFVPRL 324
WP_011288258 280 -N--RRWRIP----------ETKNG-KPHEIYLSDFAVEHFRKVKVLSNp--------------------DiAWVYPGRD 325
WP_011313187 293 -Q--GLWRIPPD--------RTKAG-RAHLVHLAPQAVKILEDVKKITGk--------------------E-RFVFASPL 339
WP_011366032 271 cKrcGWWTIPAE--------RMKNG-EEHRIYLTPTALELIGD----A----------------------E-GYIFPSPQ 314
WP_083769700 272 -Q--GMWVLPPE--------RTKNR-KAHTLYLPNLAMRLIESMRPISGh--------------------G-EYVLS-LG 317
WP_013722265 303 -K--GVWFLP----------ETKNG-KAHHIHLSAFALRHFRELHTLTGs--------------------S-QWVLPGRN 347
WP_009206143 279 -T--GTWRIPPE--------NAKNA-KSHTVFLSPFAVNQFEILKALDKe--------------------S-PWVLPARW 325
WP_032124678 302 -R--KLWRIPHE--------NSKND-REHIVFLSPFTFGLFTQLHAITGe--------------------G-EWCFPASR 348
WP_087447257 262 -S--GMWRIPPE--------NSKNA-KEHTIYLSPFAARQFEVLKALAVk--------------------S-PWVLPARW 308
WP_130538582 283 -E--GTIFL--K--------ETKTG-ASRYVQLSVQAIKFLADIH-VSG-----------------------KYVFRAKN 324
WP_007893402 325 tarn--------------------gkggD-WYapgsfGATWNE-ILKR----------A-----K----I---KHRKAYE 360
WP_011288258 326 ckkalssksit-------kqlgdrqrssEpMK-----RRSKSTsALALp---------------G--------GKWGPHD 370
WP_011313187 340 rd------------------------kqP-VY-----GRSVNN-ALKS----------Lfr--rGmlsnV---TPCTIHD 373
WP_011366032 315 dg-------------------------qP-IN-----RNSLSQ-LVSRernnkkpngeMyppyyG----L---PEWTPHD 355
WP_083769700 318 ng------------------------itP-LS-----TEGLTV-TLRR----------L-----St--rLesvPHFTVHD 349
WP_013722265 348 trkdgtpadhvcpkslakqfgdrqerdtP-MS-----GRTKATgTLALp---------------G--------GKWTPHD 398
WP_009206143 326 enkegkrvhvcvks-lskqvgdrqrgdkPpMA-----CRSLNTnALELp---------------G--------GRWTPHD 376
WP_032124678 349 ldnhhvcpkti------tkqitdrqrslPnLK-----NRTKNNaALVLs---------------R--------GLWKPHD 394
WP_087447257 309 tdqhvcvksla------kqigdrqrgdkPpMK-----CRSLNInALVFp---------------G--------GKWTPHD 354
WP_130538582 325 rsgn--------------------ltdrP-LD-----QKQLTQ-QLYY----------Srk--nNdhpdI---DSWTPHD 362
WP_007893402 361 SRHTYACWALSA-GANPNFIASQMGHNSAQMVYSVYGK---WmnDNnVDQMsiLN---ANFGGn-ApqmpqavnqK 428
WP_011288258 371 LRRTGATMMTQL-HVLPDVVEHCLNHIEENRTKRVYQRhtyE--HE-MQAA--WKalgKNLTRlaGl--------H 432
WP_011313187 374 FRRTLVTRLPDL-GFEHFLGHKIANHML-SGVSAHYNHnayE--TD-REAA--LKawaARLEVlaTe--------N 434
WP_011366032 356 LRRTARTLLARV-GVPEEHAEEVLSHKKE-GLVDRYNRhdyM--EE-KKEA--LIkleAELMKl-----------S 413
WP_083769700 350 LRRSAATAWGEHlKTSPHVIEKMLNHQPRDRLVATYQRaayI--DE-QKMA--WKawgEMVENhvAndfgnvvplh 420
WP_013722265 399 LRRTGATIMAHL-GVSVDIIEKALNHTPANSLIAVYQTasrF--QE-QQVA--WDklgQHLDWvlSg--------K 460
WP_009206143 377 LRRTGATIMGAL-GVRPDVIEKCLNHVEQNKIVRIYQRqelK--AE-QADA--WRllgERLELllRn--------D 438
WP_032124678 395 LRRTGATMMTAL-GVLPEVAERCLNHTEENRVKRIYQRhtyE--SE-MKMA--WEklgKHLETlmGi--------T 456
WP_087447257 355 LRRTGATMMGIL-GTRPDVIEKCLNHVEQNKLLRIYQRqklE--AE-QAEA--WRllgERLELllRd--------E 416
WP_130538582 363 LRRTVRTQLAKL-RCPREVSEAILGHSK-KGIEGTYDLhhyE--EE-AKEW--LQkwcDRLDEivIc--------Q 423
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