5YVQ


Conserved Protein Domain Family
Caudo_TAP

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pfam02413: Caudo_TAP 
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Caudovirales tail fibre assembly protein, lambda gpK
This family contains bacterial and phage tail fibre assembly proteins. E.coli contains several members of this family although the function of these proteins is uncertain. Using the lambda phage members as examples, there are both gptfa and gpK tail proteins here. GpK forms part of the TTC or tail-tip complex that is located at the distal end of the tail. TTCs form the platform on which the tail-tube proteins self-assemble and are also the attachment point for fibres or receptor-binding proteins that mediate phage-adsorption to the surface of the host cell. TTC assembly starts with gpJ, which is also known as the central tail fibre and is involved in host-cell adsorption. It is the C-terminus of gpJ that interacts with the lamB receptor on host cells. A number of intermediates including gpK then interact with gpJ during tail morphogenesis.
Statistics
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PSSM-Id: 426761
Aligned: 30 rows
Threshold Bit Score: 103.655
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5YVQ_B  39 EEVNNFQDDTIKI----VYDENNIIVAItkdastlnpegfSVVEIPditan---rradDSGKWMFKDGavvKRiy----- 106
Q7N2R4  69 RGKTAYNTQTRLP----QEITDLGELPK------------TLTFEQ------------PATHFDRWDG---SKwvtdkva 117 Photorhabdus laumondi...
Q7N5B9  87 RGKIAYNTQAGVQ----EEVTVLGELPE------------ILTFEQ------------PSTDFDQWDG---EKwvtdfea 135 Photorhabdus laumondi...
Q7NAB5  78 RGKIAYDTQTGEQ----KEIIKPGELPE------------TLTCKQ------------PNTDFDKWDG---EKwvtdiea 126 Photorhabdus laumondi...
P40784  72 RGETVYDTTTGNQ----MYISEPGPLPE------------NVTSVS------------PGGGYKKWDSk-aKAwvndega 122 Salmonella enterica s...
Q8ZNJ2   8 STSNTYFSEENIP----AYKAS-GLWSN------------DFYALTdeevdkyymktpPKGMYLGSSng-rIAwvcippp 69  Salmonella enterica s...
P77656   7 ATTNSFYPLEMKE----DYTQA-GSWPD------------DAVEVDeqvyie-fsglpPKGKIRIAGEngfPAwseippp 68  Escherichia coli K-12
Q8XYR5  74 RSAPLYRAADGVPydygGAYQGIGPLPAelt------------------------qqpRPSAAHIWDGaawQLdea---l 126 Ralstonia solanacearum
Q7P173  68 RAVKLWSVDTAQP-----VQARLGDTPDslra-----------------------tllQPCEFPTWDGkgwSInkt---a 116 Chromobacterium viola...
P09153  78 RGETVYSTKTGES----KEIKAPGDYPE------------NTTTIA------------PLSPYDKWDGekwVTdte---a 126 Escherichia coli K-12
5YVQ_B 107 taDEQQQQAESQKAALLSEAESVIQPLE--RAVRLN-MATDEERARLESWERYSVLVSR-VDTANP------EWPQKPE 175
Q7N2R4 118 ikDSEIEQAEQLRDTLCTQSNETITLLQ--YAVDTE-LASEEEQTLLLEWKKYLVLLNR-VDTSLApd---iKWPEMPE 189 Photorhabdus laumondii...
Q7N5B9 136 qkVSQIEQAEQQRAIFRRQADEAITVLQ--YAVETE-MASEEEKTLLLDWKKYLVLLRR-VDVSSApd---iNWPEQPQ 207 Photorhabdus laumondii...
Q7NAB5 127 qkNSQIEQAEQHRVTLRQQADEVMTLLQ--YAIETE-MASDTEKALLLAWKKYVVLLSR-VDTSMVsd---vDWPQIPK 198 Photorhabdus laumondii...
P40784 123 evAARLREAEGTKSRLLQMASGKIAPLQ--DAVDLG-IATDDEKAQLDEWKKYRVLVNR-VDTSNp------DWPEQPV 191 Salmonella enterica su...
Q8ZNJ2  70 tqDDLISAANQEKKKRIDQANEHMNSRRwpGKAALG-RLTGDELAQYNLWLDYLDALKA-VDTSVAqn---iACPIRKA 143 Salmonella enterica su...
P77656  69 thEEQIAAAELKKQQLINQANDYMNSKQwaGKAAIG-RLKGEELAQYNLWLDYLDALEL-VDTSSApd---iEWPTPPA 142 Escherichia coli K-12
Q8XYR5 127 raSQHRADALVERCVRMKQAWHAIEPLL--AAAELG-EATEAEAARLLAWRRHLVALNR-VDLDADp----vAWPEAPD 197 Ralstonia solanacearum
Q7P173 117 qsAALAQKTAAELKQRLADAYAARRPLE--DAESIG-IATADELQKLAAWKRYCVDLSRlPDLAMWprlvgaDWPKQPA 192 Chromobacterium violaceum
P09153 127 qhSAAVDAAEAQRQSLIDAAMASISLIQ--LKLQAGrKLTQAETTRLNAVLDYIDAVTA-TDTSTApd---vIWPELPE 199 Escherichia coli K-12
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