Conserved Protein Domain Family
rnhB

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PRK00015: rnhB 
ribonuclease HII; Validated
Statistics
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PSSM-Id: 234574
Aligned: 780 rows
Threshold Bit Score: 143.762
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
23464878   13 AAQGYD-LIAGFDEVGRGALAGPVMVGCAAIwardlepldgdD-AVelsgrtY-L------GVpdgvADSKMLTEHRREA 83 
126178454   1 -----------MDEAGKGSVLGPMVVAAVGC-------------RE--------IedlatlPI----RDSKVLRPKQREA 44 
171184725   1 --MSFL--EGGVDEAGRGPVVGPMVIAVVVGd----------------------GgvlarlGV----RDSKRLSPERRER 50 
119872804   1 -------MICGIDEAGRGPVVGPMVIAAVAGdge------rlL-QL---------------GV----RDSKTLSPTKREV 47 
154151483   1 -------MICGVDEAGKGSVLGPMVIAGVGV-------------GStemidgF--------GL----RDSKQLSPSERER 48 
18312482    1 -------MIGGIDEAGRGPVIGPMVIAIVVGes-------ddM-IKi--------------GV----RDSKRLSPGAREA 47 
124486303   1 ------mtICGVDEAGKGPVLGPMITAGVLVs----------Dmse---lemL--------GI----KDSKKLSPKKRES 49 
88602504    1 -------MICGVDEAGKGSVLGPMVVAAVGC-------------TDmddliaL--------GV----ADSKKLSSKSREK 48 
145590574   1 --MTLS--VGGIDEAGRGPVVGPLVLAIVVGd----------S-EA------L-Sk----iGV----RDSKSLSPRAREV 50 
126459394   8 LSRPYLtVIGGVDEAGRGPLVGPLVIAVVVGd----------SdVL------LgV------GV----RDSKALSPGARER 61 
23464878   84 IFDELRDWCAAYAVGQASNAEIDE-----WGIT----YALGVAALRALSQVerelglrlggestikkasgesageivegr 154
126178454  45 LYEILFRD-FSIAIVTIDAAGIDD-------------ARSRMSMNTCVAELhaea------------------------- 85 
171184725  51 LYQLILEAADCVNYVVVEPAVVDTyv--wRGLL----NALELDYTAKLIEL----------------------------- 95 
119872804  48 IYARIIEVADCVNYVVVEPHIIDEyv--rRRML----NSLELDFTARLIEL----------------------------- 92 
154151483  49 LFVLIKKKCK-VATVVISAAEIDA-----FRREmtlnTCVARAHAVVIAQL----------------------------- 93 
18312482   48 VYEKILRVAACVNYVVIEPAEIDAyv--sRGML----NALELKYTAQLINLc---------------------------- 93 
124486303  50 LFEEITFSWKTYTV-VRTPFDIDSregtmNAFT----ASCHADVVRALCAD----------------------------- 95 
88602504   49 ISADIKAQFP-FSIVIRTAHDIDE-----LRRTmtmnEIVARSHAEALIPL----------------------------- 93 
145590574  51 LYGKILEMAVCVNYAVVEPYEID------LHVSrgmlNALEMKYAAKLMEL----------------------------- 95 
126459394  62 VFARVLEVAECVNYIVVEPHIVDMyt--sKGLL----NALEIDYTAKLLA------------------------------ 105
23464878  155 pggsvgesigncggsvralpkvagilDGPSdyiTKalnTFDAPDVP---------IP--------------ADITTKV-- 209
126178454  86 -----------------------lmsLQPE---YA---YVDACD------------VnaerygrtvaelldYPCEIVAeh 124
171184725  96 --------------------------CPAD---VY---YVDSPDVDprrygsaleFIt-------------GRRVVAM-- 128
119872804  93 ---------------------------CPAelyYVdspDVNSRRYGda------lSF--------------ITGRRVVal 125
154151483  94 ---------------------------APE---IA---YVDACDVNp--------FRyaetv----rgylsSPCEIVSeh 128
18312482   94 ---------------------------PAE---YY---YVDSPDvnpkryes------------glvfatgKRVIALH-- 126
124486303  96 ---------------------------------FV---YLDACDVNakr---fgeNVlrl---------sgSSAHVCSeh 127
88602504   94 ---------------------------NCT---CA---YVDACDVSe--------ERyeetv----ssfspPDCTIVArh 128
145590574  96 --------------------------CPAD---LY---YVDSPDVKaarfg---------------dglsfLTGRRVVsl 128
126459394 106 --------------------------TCPAdvyYVdspDVKPERygsa--------------------lsmATGKRIVal 139
23464878  210 KGDQHCATVATAAVIAKVTRDRLMVDLaqsNPRYAAYEwAHNKGYGSAAHRAA-----IAEH------GPT--PLHRVSW 276
126178454 125 HADARHKVVGAASVVAKVTRDRAIREL---EQQYGAIG----SGYPSDPATIEflrgyIRSH------GSPp-ACARRSW 190
171184725 129 HKGESVPQVAAASIVAKVVRDRLVALL---KKEVGDFG----SGYPSDPRTRE-----WLKW------GRLppECVRWSW 190
119872804 126 HGGESVPQVAAASIVAKVIRDRLIDIL---KREIGDFG----SGYPSDVKTIE-----WLRL------GKIpvECVRRSW 187
154151483 129 HADSTYPVVSAASIVAKVTRDREIAKL------AKKYG-QIGSGYPSDPETIA-----YLNAyidehrIPP--PIARKSW 194
18312482  127 KGEAV-PQVAAASIVAKVVRDRLIQLL------KKEVG-DFGSGYPSDPRTLQ-----RLRE------GRMpsECIRWQW 187
124486303 128 KADAKYAVVGAASIVAKVTRDRCIADL---KEEYGEIG----SGYPSDPATISflteyIRTR------GEVp-LCARRSW 193
88602504  129 KADSLFPPVSAASIIAKVERDRIIEEL------SKEYG-DIGSGYPSDPVTIT-----YLTKyirhhnQPP--VIARSSW 194
145590574 129 HKGEAVPQVAAASIVAKVVRDRLVEML---RKEVGDFG----SGYPSDRKTRE-----WLRG------GRIphECVRWSW 190
126459394 140 NKGERVPQVAAASIVAKVVRDRLIDLL---KREVGDFG----SGYPSDPRTVE-----FVKR------GLVpsECIRHSW 201
23464878  277 HLT 279
126178454 191 KTV 193
171184725 191 RTL 193
119872804 188 RTL 190
154151483 195 KTV 197
18312482  188 KTV 190
124486303 194 QTV 196
88602504  195 ETV 197
145590574 191 ETV 193
126459394 202 kvr 204
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