Conserved Protein Domain Family
SLC5sbd_NIS-like_u3

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cd11495: SLC5sbd_NIS-like_u3 
uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain
Proteins belonging to the same subfamily as this uncharacterized subgroup include i) NIS, which transports I-, and other anions including ClO4-, SCN-, and Br-, ii) SMVT, which transports biotin, pantothenic acid and lipoate, and iii) the Na(+)/monocarboxylate cotransporters SMCT1 and 2. SMCT1 is a high-affinity transporter while SMCT2 is a low-affinity transporter. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271386
Aligned: 38 rows
Threshold Bit Score: 417.327
Created: 15-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Na binding site
Feature 1:Na binding site [ion binding site]
Evidence:
  • Comment:based on the structures of Vibrio parahaemolyticus vSGLT (SLC5), Aquifex aeolicus LeuT (SLC6), and the NCS1, Microbacterium liquefaciens Mhp1, bound with Na+, functional studies of Escherichia coli PutP (SLC5) and mammalian NIS (SLC5), and mutational analysis of vSGLT
  • Comment:one of two Na+ binding sites in Aquifex aeolicus LeuT, where it is referred to as the Na binding site 2

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  #                    
YP_001501378 391 FGWINMTVLVTYLVFVVLVGLFFv-----FKNRTTNDYFRGGQs-IPWWAAACSIYATMLSSLTYVALPAVVFQSNWLLL 464 Shewanella peal...
NP_370838      6 FGTLNWVAVIIYLLAMLFIGVYFt----kRASQSTNSFFTASGr-LPSWVVGFSIYATTLSAITFMSTPEKAFLTDWSYI 80  Staphylococcus ...
NP_975542     18 FHWADYLVLVIYLLFTLGIGLYFqfksklQKAENTDEYFKAGGk-TPGWVAGFSIYATTLSAITYMATPAKAFSTDWLFA 96  Mycoplasma myco...
ACR18591       5 FGTLNWLAIAVYIVAMLAVGIYFs----kRAGASSDDYFKAGGr-IPAWAAGFSIYATTLSAITFMSIPEKAYLTDWAYS 79  Corynebacterium...
EFV35315       6 FGTLNSIVLAIYLLAMLGVGMYFt----kKAGESTEAFFKAGGk-VPSWAVGFSIYATTLSAITFMATPEKAFNGDWTYA 80  Gemella moribil...
ACT63734       6 FGVLNWVVLGAYLLAMLGVGAYFt----rKASKNTDSFFKAEGh-IPAWAAGFSIYATTLSAITFMSTPEQAFLSDWAYA 80  Lactobacillus p...
EFL95981       6 FGVLNWLVLIAYLIIMLVIGLSFs----kKSSKNSEEFFKASTsnVPAWAVGFSIFATTLSAITYMSTPEKSFLTNWAYA 81  Pediococcus aci...
ADG72536       3 WHWFDWVVIGLYFVVMFLIGMFFa-----RRTKSTDDYFKAGGr-VPALVTAMSIYATALSSISFIAIPASVYNNSWLLG 76  Brachyspira mur...
EEO36903       3 WHWFNWVIILLYFVGMFMVGVYFs-----KRTTSTEDYFKAGGr-VPAWVTACSIYATALSSISFIAIPASVFSKGWLLG 76  Fusobacterium m...
EEZ39615       3 WSAVNWFVIALYFAGMLGIGVYFs-----KRNKSTDDYFKAGGr-VPTWVTACSVYATALSSISFIAIPASIYANGAIMG 76  Photobacterium ...
Feature 1                                                                                        
YP_001501378 465 LGIWMIIAVAPIAIYVAMPFFRQIDAtSAYEYLSKRFNMSVRLFASGLFTLFHVGRMGIVMALTALALSAVTPLS-PSES 543 Shewanella peal...
NP_370838     81 AGNIAIVAIIPLLIYFYVPFFKKLKVtSAYEYLEARFGPSIRVIGSLLFVVYHLGRVAIVIYLPTLAITSVSDMN-PYIV 159 Staphylococcus ...
NP_975542     97 FGNLTIFIATPLLIRFIIPFFKKLSDvSGYGFLEKRFSYFLRVAASLMFILFHIIRVGLIIYLPTIALTAVTNIN-PYLI 175 Mycoplasma myco...
ACR18591      80 AGNIAIFAIVPILVYYYVPFFRKLDVtTAYEYLEERFDVVLRVFGSLFFVLFHIGRIAIVIYLPTLALTAVSDIN-PYLI 158 Corynebacterium...
EFV35315      81 AGNVAIIAIIPILIYYYVPFFRKLDVtTAYEYLEERFNPSMRVIGSVLFSLFHIGRIAIVVYLPTVAITSVSTVN-PYLV 159 Gemella moribil...
ACT63734      81 IGSFSILIIIPILVKFYIPFFRKLKVtTAYEYLEERFSPVMRAISSLLFVLYHISRVAIVIYLPIIAITSVSNIN-PILI 159 Lactobacillus p...
EFL95981      82 FGNLAIFLITPVLIKYYIPFFSKLRVtTAYEYLEFRFNPFLRVFSSILFVLFHIGRIAIVIYLPTVALQSIININ-PYLI 160 Pediococcus aci...
ADG72536      77 MAPLGIILIVLWVAPTFVPFFRRVNVtTAYEYLGKRFNNSFRLVGSLTFILFHVVRMAIVIYLPTLAIQQVLPSLnPVLI 156 Brachyspira mur...
EEO36903      77 MAPLGIIPIVWVAAVVFVPFFRRVNVtTAYEYLGKRFDNKFRLIGSLAFILFHVVRMAIVLYLPTLALQQALPSLnPVIL 156 Fusobacterium m...
EEZ39615      77 LAPLGIMVMVVWAALVFVPFFRKVNVtTAYEYLGKRFDPKLCYVASISFIVFHIIRIAVVLYLPTLALQQALPGVdPVIL 156 Photobacterium ...
Feature 1                                                                                        
YP_001501378 544 VLIMGVLCLIYCTMGGIEAVIWTDTLQTIVLLIGAVLCFIIIIAGLdGGMAEFISIGLTDNKFTmvdvdfsldsittlsI 623 Shewanella peal...
NP_370838    160 ASLVGLLCILYTFLGGFEGVVWSDFIQGVILLGGALVIIILGVMNIkGGFGTVFADAIEHKKLIsadnwkl--ntaaaaI 237 Staphylococcus ...
NP_975542    176 AVIIGIFCVISTVLGGLNGVIWSDFIQAVVLIGGILLAIIFALIKM-PNLNEVNSIVINNHKLLakesiip-qswakpwI 253 Mycoplasma myco...
ACR18591     159 AGLVGIACVIYTFLGGMEGVIWSDVIQGIILLSGAVIVIVVALVNSpGSISHTLSEAASNGKFYsgqnftf--sdlsvsI 236 Corynebacterium...
EFV35315     160 CAAIGILCVIYSFMGGIEGVIWTDVIQGIILLGGAILVIILGVYQV-GGFGNVATDALANGKIVtaqkfsw--sftastI 236 Gemella moribil...
ACT63734     160 ACVVGGLCILYTFLGGIEGVIWSDVIQGFLLLGSALLICVLGIFYIkGGFGTVVNDVVTNHKFIsgndfni--gdlskfV 237 Lactobacillus p...
EFL95981     161 ASLITILCIIYTYHGGMEGVIWSDVIQGILLLVGAVLIIFFAVHGThGGLQTVAQDAVNKGKILtkadfvw--svtkstV 238 Pediococcus aci...
ADG72536     157 TVIVSIFCVAYTSMGGIEAVLWSDAIQTVVLLLGAFLIIIVGFASApEGIGQGFQLLADDGKIItpdfftf--dlfktsI 234 Brachyspira mur...
EEO36903     157 TVGVAIFCVAYTSMGGIEAVLWSDAIQTIVLLLGALLIIIAGFTAApEGVGQGFKALSEGGMLLnsdffsm--dlakisI 234 Fusobacterium m...
EEZ39615     157 VGSVALMCVIYTSIGGIEAVVWSDAIQTIILLAGAVVIAVIGYSASpDGLFAAFDRLVADQKTLpesafni--sfagttL 234 Photobacterium ...
Feature 1                                                                                        
YP_001501378 624 WVVVIGGIGQNLSSYTADQAVVQRYMVTKnpKEASRSIWANAIIAAPAALLFFCIGTGLYAFYQTHPEkldp-------- 695 Shewanella peal...
NP_370838    238 PIIFLGNIFNNLYQYTASQDVVQRYQASDslKETNKSLWTNGILALISAPLFYGMGTMLYSFYTHEAVlpkg-------- 309 Staphylococcus ...
NP_975542    254 LVLFFGQLINTFYQYIGSQDVVQRYQSNQsfKQVKKGLWTNAILSLITILLFYGMGTLLYAFYVQKTGltsideim---k 330 Mycoplasma myco...
ACR18591     237 PIIFLGSVLNNLQSYTASQDVVQRYQTTPsvQATKGSLYVNGCLALITIPIFYGMGTALYTYYQGNGGfpdd-------- 308 Corynebacterium...
EFV35315     237 PIIFIGSIFNNLQQYTASQDVVQRYSTTEsiKETNKSIWTNGLLAFITIPIFYGMGTVLYSFYKGANAvtklpdfmnaev 316 Gemella moribil...
ACT63734     238 PLILAGQIFNSLYQYTGSQDVVQRYQTTAtiKDTNKSMYTNGWLALITIPLFFGMGTILYSFYQHTAAlpag-------- 309 Lactobacillus p...
EFL95981     239 PIILLGQIFNTLYQYTASQDVVQRYTTSTdnKHIAKSIWTNALLSLITIPLFYGMGTVIYSFYQHGGSlpsg-------- 310 Pediococcus aci...
ADG72536     235 WTIIIGGFVNSIYSYIGSQDIVQRYATNKdeHEAKKSLYMNIPLLCTSIVIFIGMGSALYIYFHFKTPlpen-------- 306 Brachyspira mur...
EEO36903     235 WTMLIGGFVNSIYSYVGSQDIVQRYNTTKneEEAKKSLFMNIPLLLTSIFIFVGMGSALFIFFKFKAQlptg-------- 306 Fusobacterium m...
EEZ39615     235 IGIILGGVINSIYSYVGSQDIVQRYNITKttKEAQNSLFMNVPLLFTSMAIFIGMGTALYIFFAFTAPlpge-------- 306 Photobacterium ...
Feature 1                                         #  ##                                          
YP_001501378 696 ---tiqiDQIFPTFIATELPVGLAGLIVAGIFAAAQSTVSTSMNSIATTLVTDFIRPFnl-vkTEQGYMSAARWLTFIMG 771 Shewanella peal...
NP_370838    310 ----fntSSVVPYFILTEMPPFVAGLLIAAIFAAAQSTISSSLNSISACISIDIKQRFfg-kdSERHEVNFARFIIIIAG 384 Staphylococcus ...
NP_975542    331 nigtnanNQILPYFIVTVLPVGISGLIIAGIYSASMSTISSSLHSAATCIVEDILIRIkp-dlKDKQKMYWAKGLILGIG 409 Mycoplasma myco...
ACR18591     309 ----vntSAIVPYYILTELPGGVAGLIIGGILAAAQSTISSSLNSISACITVDIRNRLmp--gRGEASVLFSRMIIVFTG 382 Corynebacterium...
EFV35315     317 vgkaantTALVPYFILTALPAGVAGLVIAAILAAAQSTISSSLNSISACITVDIKQRFfgtskDAKQDVLLARVIIIIAG 396 Gemella moribil...
ACT63734     310 ----fntSAVVPYFVITQMPAGVAGLVIAGIFAAAQSTIASSLNAISSCVITDFKQRFfndkfKDSNDVTLARGIIIIAG 385 Lactobacillus p...
EFL95981     311 ----fntSALVPYFVLTEIPAGVAGLIIAAIFAASQATIASSLNSTAACLVTDIQKRFmk-dkSDRMSMRITRLSILICG 385 Pediococcus aci...
ADG72536     307 ----vngNAILPYFVVNALPVGISGLVIAAIFAAAQSTVSSSLNSVSTCMTADILEFLkp-gmEDASKLKFARLSSWIVG 381 Brachyspira mur...
EEO36903     307 ----ingNAILPYFVIQYIPTGISGLVLAAIFAAAQSTVSSSLNSVSTCMTADILEHLrp-dmSDKQKLSFAKGSSWVVG 381 Fusobacterium m...
EEZ39615     307 ----ingNAILPYFVIKYVPAGLSGLIIAAIFAAAQSTVSSSLNAISTCVTSDLVSKArp-dmDDSSKLKVAKGASWIIG 381 Photobacterium ...
Feature 1                                                                                        
YP_001501378 772 VLGTLAGLIFIdpEIRSLMEAYFKVIGMFMGALGGLFVLGALTKKANSFGAIVGILAGVATMVSAw-------------q 838 Shewanella peal...
NP_370838    385 IFGFGMSLYLIasNSNDLWDLFLFVTGLFGVPLAGVFAVGIFTKRTNTFGVICGLILGIIFAYVYng------------v 452 Staphylococcus ...
NP_975542    410 LLGTIAALVLIvtKADNLLDLFAAIIGLFGTSVTVIYLLGIFTKRTSNTGAILGAISSFIIVFVIfiin--------ktt 481 Mycoplasma myco...
ACR18591     383 LFSTGVALWLIasEKGELWDLFLTLTGLFGIPIAAVFALGIFTVRANRFGVLAGLLLGAVSGYFMn-------------- 448 Corynebacterium...
EFV35315     397 VLGTIAALYFVntNQKETWDLFLKYTGLLGVPLAGTFALGIFTKRANGAGALLGLIVAGLVCYYIqdy----------tt 466 Gemella moribil...
ACT63734     386 VLGLAVAIYLLmgNASQIWNLFLSVTGIFGVPIAGIFAVGIFTKRANTVGVLTGLVLSVGLSFWVq-------------- 451 Lactobacillus p...
EFL95981     386 IFGLLVTLVLIklHSSDMIDTYLSLFGLFGVPIAGIFALGIVSQRANGFGATLGMIVTTAICYFIq-------------- 451 Pediococcus aci...
ADG72536     382 IFSTLLAIYFIynGQGDMFLYFQAITGLLGGPIAAVFLVGIFFDKIETKAVWIGFILSVIVAFYIsdpagmltkfipgyt 461 Brachyspira mur...
EEO36903     382 ILSTILAVHFLyaGQGDMFLYFQAITGLLGGPIAGVFLVGIFFEKVNTKAVWVGFIASILIAVYLtnpmgmaaavipnyv 461 Fusobacterium m...
EEZ39615     382 LISTALALHFLkaGQGDMFLYFQAITGLLGGPIAGLFLAGIFIKRINAKSAWFGFGISVIVATYIgdpagllsgyipgyv 461 Photobacterium ...
Feature 1                                   
YP_001501378 839 LGWANGYLYATIGIVSCLVFGYLASLL 865 Shewanella pealeana ATCC 700345
NP_370838    453 GKGNSPFYVSTISFTVAFVFAYILSFI 479 Staphylococcus aureus subsp. aureus Mu50
NP_975542    482 KIAISDFYGIILAFVIGLLVGYLSSFI 508 Mycoplasma mycoides subsp. mycoides SC str. PG1
ACR18591     449 QTDLGPFMISIVAFAVTLVAGYVLSIP 475 Corynebacterium kroppenstedtii DSM 44385
EFV35315     467 YAKQSPFIFSGFSFLSSLVFGYICSFF 493 Gemella moribillum M424
ACT63734     452 SLNISSLLVACVAFISAFVLSYVVSLL 478 Lactobacillus plantarum JDM1
EFL95981     452 THGINALFVSVVGFLGAMILGYIFSFL 478 Pediococcus acidilactici DSM 20284
ADG72536     462 KPEIFEFMLSFIIIAVGVIGSFLASFA 488 Brachyspira murdochii DSM 12563
EEO36903     462 QPKVFEFMISFLIIGGSVIVSVLASFV 488 Fusobacterium mortiferum ATCC 9817
EEZ39615     462 KPQIFEFMISLVVILACVVPAYISSFF 488 Photobacterium damselae subsp. damselae CIP 102761

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