Conserved Protein Domain Family
NlpD

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COG0739: NlpD 
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 440502
Aligned: 875 rows
Threshold Bit Score: 48.4307
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_102992900  69 SNKAWLQMMEEWVKADLTSTESPLSSGERPKPIAKPKTPPVTAKPDPKPDDEQPNPGKQQGVALTVIHkngsayiklaev 148
WP_083857741 128 VVGALWSYGSAGNAKLAAEMSIKAESRTEGSEALPALQPTFTPTFAATPLAIADVSELTQIVIVTPTPdtgqavttagaa 207
WP_011450363     --------------------------------------------------------------------------------    
WP_013778598     --------------------------------------------------------------------------------    
WP_012676201  76 VKYGENLSYIAKKYKVSVKSIIRANGLKKPYVIRTGQILKIPKKSVKSSTITEERYCKIKHKVKKGESlitiakkyrvwv 155
WP_049873399  53 PTPEIEAQVAEEVAKARGILDDLNFDNLLASPYLVSAIYYHDGFLSGFSVDRSNADPERRIIGQISKMlsadhktrflrl 132
WP_095042349     --------------------------------------------------------------------------------    
WP_013484710  54 SGAASASSAGSDDAAGWDGAEQTVNTVSGVTGSRSSSGADSASSSQAASSAPSSSASSAASSAAQTAApny--------- 124
WP_005929312     --------------------------------------------------------------------------------    
WP_079932865  83 RQDPLSQSASAAIRYLLNTDTELEPVLGRIVKVVLSGEFNEWPALTALTTKPEETKPAVSNQTFVLPLs----------- 151
WP_102992900 149 krhlpikgrvdlrsgkmtltyr---------------------------------------------------------- 170
WP_083857741 208 ierasisganrdsriglmgllppgnvslfqasqpridlsdlkippvaeevsdapppqiqvvlldgtvltpereqkamqpt 287
WP_011450363   1 ------------------------------------------------mriaassvclfllcgcltqspapvsmkgerfy 32 
WP_013778598   1 ----------------------------------------------myyyeqpsekkwlgpenlkkiaicilivilvlcm 34 
WP_012676201 156 kdikrlnnikgntirvgqvlcikegvkksvkkskkskgssiivkkkkivrkkii---------------ryrvksgdsla 220
WP_049873399 133 lhe----------------------------------------------------------------------------- 135
WP_095042349     --------------------------------------------------------------------------------    
WP_013484710     --------------------------------------------------------------------------------    
WP_005929312   1 meqirkflrdkgfalallaclvaaaaagvwavrtvrdeldknlsglktpdststapgideglstttpqedettwewptep 80 
WP_079932865     --------------------------------------------------------------------------------    
WP_102992900 171 ---------------------earlelvrniavmnlngiyaplkepplieesevfIPVSilqevfgqslniegGKtiwI- 228
WP_083857741 288 vapepptptptplipplvkgpptrywssfqpappeendhfwiespflnteynrvaAP----------------Sy----- 346
WP_011450363  33 gstdsdehleyrltrdnstptgrstakpglvlvedastsnmdpvvyearpgcdfsMPLN--------------GK---V- 94 
WP_013778598  35 kkinipvtktalakigyfisdysyefkdlaevannisqvsksipvigqkkqellpMPVD--------------GE---V- 96 
WP_012676201 221 kiakrygttiseiarlnglkkpytiypgqrlkipkkivyveeeivkrksvpfgfiWPVD--------------GK---I- 282
WP_049873399 136 -----------------------------------------twnrsdpagpqrlaVP---------------------Va 153
WP_095042349   1 -----------------------------------------------------------------mpgserneGy----- 10 
WP_013484710 125 -----------------------------------------------------yvMPVT--------------GD---V- 133
WP_005929312  81 aansvsnvpkaassasrsassassapqagsgsvrepsalqgasspasssaapastQPVS--------------GR---V- 142
WP_079932865 152 -------------------------------------------------------------------------GQ---I- 154
WP_102992900 229 ADEdavpaFaqqpdlpnfsvkGmirylsfvekplkgahvsTRAshlpgAPrTYRNG-VH-EGLDwY--SYGTgtridrnt 304
WP_083857741 347 --Q-----F------------Gst--------------------------aGGQYR-PH-HGID-IanRWGT-------- 370
WP_011450363  95 VSMq---sF------------Gn----------------------------TGGVR-CE-SGVA-IisKGDI-------- 120
WP_013778598  97 SSE-----Y------------G------------------MRL-----HPiLKEQR-MH-NGID-IvqKEGI-------- 125
WP_012676201 283 VKN-----F------------------------------------------VNNSQmRH-LGID-IqtECDT-------- 305
WP_049873399 154 YSA-----L------------G-----------------------------GGRQT--HrYAID-LfaREGT-------- 176
WP_095042349  11 --P-----Y------------Gsd--------------------------gSGRYL-LH-NGLD-MadEAGT-------- 34 
WP_013484710 134 ITA-----Y------------Sp-----------------NTPi---yDKtMDDWR-VS-DCVN-IaaDEGT-------- 165
WP_005929312 143 LNG-----Ys-----------G------------------DELv---yNKtLGDWR-TH-NGID-YacAKDA-------- 174
WP_079932865 155 SKK-----F------------G------------------WVM-----EPnSDYPR-FH-QGID-IlaPTGT-------- 183
WP_102992900 305 PVYSIADGVVVRAdhdyremttpereallakgaendGQtpe-----dilD---R-M-----RGRSV-WIQ-------H-D 361
WP_083857741 371 PVQAGVAGTVVFA-----------------------GL-----------DdpiAmGpypnfYGNTV-VIRldrrlpvAgG 415
WP_011450363 121 EVTASSRGKVMYV-----------------------GK-----------Nl--R-K-----YGNLV-ILE-------H-D 149
WP_013778598 126 PVKSVLDGVVFSV-----------------------GQ-----------D---K-E-----MGNMV-RIR-------H-D 153
WP_012676201 306 PVKAAEDGKVIFA-----------------------GD-----------Si--K-A-----YGRLI-VIK-------H-A 334
WP_049873399 177 TVHAVSRGIVVLA-----------------------DRewdpanlfsttSr--K-G------GNAViVFDp-----dH-- 217
WP_095042349  35 AAVAPFAGEVILA-----------------------RD-----------DldeHfGwrcdwYGQLV-VIRae---qlHdG 76 
WP_013484710 166 PVKACADGTVLDV-----------------------KV-----------D---S-M-----LGQEV-IIQ-------H-S 193
WP_005929312 175 AVQSPTAGTVVLA-----------------------GS-----------D---G-S-----WGPTV-AIK-------D-S 202
WP_079932865 184 EVKSVLAGTVTKT-----------------------GE-----------D---R-V-----YGKYV-MIK-------H-D 211
WP_102992900 362 K-GLMARYVHLDRI-DphVRVGQKIKAGDIIGYVG-NS---GT---SdgakgndEG--L----HLHLDLFL--Y----G- 419
WP_083857741 416 ElDVFVLYGHLSRV-T--VEVGQHVEPPDIVGEVG-MT---GI---A-------IG--P----HLHLEVRV--GentyQ- 469
WP_011450363 150 R-YTITMYYNLDEI-G--VKIGDSVNKGDVLATIA-SSyagGKa-lS-------EGntP----FCCFSMRH--D----G- 205
WP_013778598 154 N-NLVTVYAHLKDV-Y--VKEQEEVKQGFIIGTVG-KT---GL---A-------ET--P----HLHFEIWH--N----D- 202
WP_012676201 335 N-NFNTVYGHINQI-N--VKDGQVVKKGDTIGTAGlLN---N----S-------EK--C----GIYFEIRK--N----T- 383
WP_049873399 218 --DRFYRYCHMSTV-Q--VSTGELVTASQIVGSVG-HS---GL---N-------ASq-PghgrHLHFETNEylE----Gh 273
WP_095042349  77 Q-PVYALFGHVADV-A--VSEGQHVAAGQPVARQG-TA---GA---A-------VV--P----HVHLEVRV--GanafG- 129
WP_013484710 194 G-GLQSIYANLSDQvA--VKKGQQVQAGTVIGAVG-QS---AQseiS-------LV--P----HLHFAMMK--N----G- 246
WP_005929312 203 A-GRVWRLCGVASP-A--VKEGETVSAGQTLGKVG-SV---SCe-cA-------EE--S----HIHLEVKQ--D----D- 253
WP_079932865 212 E-IWSSYYAHLDEI-K--VKMGDRVEAGQVIGTVG-QS---GV---A-------DT--P----HLHFELSE--K----G- 260
WP_102992900 420 -EwFwkqyslkERr-M--I-L---EG 437
WP_083857741 470 -HsV-------NP--Y--LwV---RP 480
WP_011450363 206 -KeV-------DT--Vq-H-L---KQ 216
WP_013778598 203 -KaE-------DP--Kk-W-L---NM 213
WP_012676201 384 -VpV-------DP--Lv-F-L---NE 394
WP_049873399 274 vRaI-------DyrrLrtM-LrqwRS 291
WP_095042349 130 -AtR-------NP--V--LwL---AP 140
WP_013484710 247 -QpI-------DP--Lv-T-V---QS 257
WP_005929312 254 -SyL-------DP--Ak-L-Mq---- 263
WP_079932865 261 -QvI-------DP--Le-K-L---GK 271
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