Conserved Protein Domain Family
arch_bact_SO_family_Moco

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cd02109: arch_bact_SO_family_Moco 
bacterial and archael members of the sulfite oxidase (SO) family of molybdopterin binding domains. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.
Statistics
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PSSM-Id: 239027
Aligned: 22 rows
Threshold Bit Score: 254.476
Created: 24-Jan-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Moco bindingmetal
Feature 1:Moco binding site
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 # # #                                               #                 
NP_376723     5 SPPNQHYVKKFIYYAal--gvPHVDIQKYRLKISGlveNQLEFTyEQLLnm-iDTKYTKDFHCVTGWSVADVEWEGIKLK 81  Sulfolobus tokod...
ZP_00187424  15 VPPGQYLVGDRWPVLtyg-atPEVDLRSWDFSVSGlveNPLRLTwEEWEel-pTVEVKADMHCVTSWSKLDNLWGGVQAK 92  Rubrobacter xyla...
ZP_00355997  19 VPPGQYVTEKFPVLHygsvpkYTNVEEQWDLRCWGelaEPVRFSfREFRal-pTTTIKTDIHCVTRWSKLDTTWEGVSFR 97  Chloroflexus aur...
ZP_00054158  33 LPPGQRETVDFPVLDlg--dqPNLTTRDWTLSVGGmvdNPIRWDwQTFMaq-pQTELVTDIHCVTTWSRYDNTWAGVSAK 109 Magnetospirillum...
NP_438036    57 LPPGQHLVRDWPVLDlg--qqPHLTHETWRLDVTGlveNPLSLDwNAFQal-pQSDSLSDIHCVTTWSRYDNNWRGVSTR 133 Sinorhizobium me...
BAB75372     17 VPPGQHLAKGFPVLTyg--aaPKVSLDGWEFRVWGl-aKPAVFTwSDFMnl-pHNEFTADFHCVTRWSKLDVKWTGIKVT 92  Nostoc sp. PCC 7120
BAC48168     38 LPPGQHLTKDWPVLDlg--vvPPVSRDRWRLDVYGaieHPVFWTfAEFTaq-kQVQFTSDIHCVTTWSRYDNLWEGLATH 114 Bradyrhizobium j...
BAC69008     18 LPPGQYDAGDDWPVLsae-vtPDLAAADWSFRIDGlvaEPRTWS-WDAAhalaPSAYEGDIHCVTSWSKFGVRFGGVSLD 95  Streptomyces ave...
ZP_00051501  24 LPPGQYLTDDFPVLQlg--ptPRVSTESWRFTLRQgsrPLASWSwSEFAtl-pRTRWTGDIHCVTKWSKFDTAWEGVSID 100 Magnetospirillum...
YP_147612     5 LPPGQFETEKWPILHeg--dvYEFDEATWEFRLFGevkKEVSFSyQEVMal-pKTISTVDMHCVTTWSKFDTTFEGIAFR 81  Geobacillus kaus...
Feature 1                                   #                                 #    #       #   #
NP_376723    82 KLAEMAKvkn-eakWVIFYSl-----dGYTATIPIEDAlheDTIIALKMNGKP-----LDIKAGFPARPFIPHLYGWK-S 149 Sulfolobus tokod...
ZP_00187424  93 RVLELARpkp-earYVSVFCd-----gGYTTNLPLEELyeeDALFATHHDGEP-----LTPDHGWPLRLVVPRLYAWK-S 160 Rubrobacter xyla...
ZP_00355997  98 EFLRHIPplkpsarFVIAHSe-----qGYTANLPLEALlddDVMLAYKYEGQE-----LTPEHGYPLRLLVPKKYFWK-S 166 Chloroflexus aur...
ZP_00054158 110 HLLKMVRprk-nvrFLLLRSf-----dGYTTNIPLARFddsDVLLAHSWQGQP-----LSRDHGGPVRAVIPKLYFWK-S 177 Magnetospirillum...
NP_438036   134 DLLDRVMpkp-eaaYVMLTSf-----dGYTTNLPLADFaaeDAILATAWEGAP-----ITRAHGGPMRLVVPHLYFWK-S 201 Sinorhizobium me...
BAB75372     93 DFINLIEvds-kaaHVMEHCy-----gGYTTNIAMADFvreENFFAFKLFGED-----LPSEHGGPMRLVVPHLYAWK-S 160 Nostoc sp. PCC 7120
BAC48168    115 ELLAACQpre-darFVVLHSy-----dGYTTNLALEDFaaeDALLAHSWSGQP-----LTEEHGGPVRLVVPHLYFWK-S 182 Bradyrhizobium j...
BAC69008     96 AFLGLVRpda-tatHAVAYSh-----tGYTTNLPLTDLtggRAWIAWEYDGRP-----LPAEHGGPARLLVPHLYFWK-S 163 Streptomyces ave...
ZP_00051501 101 DVLAAAGiaa-ptgFVLAEGh-----dDYTTNVPVADLvggKAMVATHYDGQP-----IPPDHGGPARLLVPHLYFWK-S 168 Magnetospirillum...
YP_147612    82 EFLRFVEldp-dvkYVKIYGylngdrfGYSANLPLDALmgnDALFVYRWKDKHhdwqdISPKHGYPLRFIPPATFYLWkG 160 Geobacillus kaus...
Feature 1        ##                                
NP_376723   150 AKWLTEIEFVKDyvdGFWEERGYHERGNVWEEERF 184 Sulfolobus tokodaii str. 7
ZP_00187424 161 AKWVRGLELLAEdrpGFWEQNGYHNYGDPWREQRY 195 Rubrobacter xylanophilus DSM 9941
ZP_00355997 167 AKWLRGIEFLDHdrlGFWERYGYNNNADPWREERY 201 Chloroflexus aurantiacus
ZP_00054158 178 AKWLRHITFSDHdtpGYWELRGYHGEGDPWKEERY 212 Magnetospirillum magnetotacticum MS-1
NP_438036   202 AKWLQRIDFRAAdsaGFWERNGYHMRGDPWLEERY 236 Sinorhizobium meliloti 1021
BAB75372    161 AKWINGLEFLDQeelGFWERNGYHRRGEPWEEERY 195 Nostoc sp. PCC 7120
BAC48168    183 AKWLQAIEFQTEdapGFWEVRGYHNRGDPWAEQRY 217 Bradyrhizobium japonicum USDA 110
BAC69008    164 AKWIAGLRILDHdepGFWEQNGYHARGNPWEEQRY 198 Streptomyces avermitilis MA-4680
ZP_00051501 169 AKWVKGLRFTERdeaGFWELRGYHMYGDPWREQRF 203 Magnetospirillum magnetotacticum MS-1
YP_147612   161 AKWASGIRFMKEdepGYWEERGYSMTANPFKEERF 195 Geobacillus kaustophilus HTA426

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