Conserved Protein Domain Family
ClpA

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TIGR02639: ClpA 
ATP-dependent Clp protease ATP-binding subunit clpA
[Protein fate, Degradation of proteins, peptides, and glycopeptides]
Statistics
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PSSM-Id: 274241
Aligned: 10 rows
Threshold Bit Score: 1107.4
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAS96080              2 IGKRLQAALNAAVGEVRVRNHEYLTLEHLLYAIAGEEQGK-GILEGCG-ADVTALRARLEEFFGTHLESLPEd------- 72  Desulfov...
CAG35615              2 ISKTLEQSLVRALQEAKKRKHQFVTIEHMLYGLLADDLAC-YIIKECG-ASIDTLREKLDKFFETRVPKISSs------- 72  Desulfot...
CAE09487              2 ISGELNVVFSEALALAKEKRHEYLTVEHIFLALLGHKEAI-ALLRECG-GNVSFMKQKVTRYLSENLKSSEEe------- 72  Wolinell...
chgcsh:AE010300_220  15 LTEEMERTLRKAWEEAKKRRNEFITLEHILLALTYDSVAK-EVLEACG-ADIERLRKDLIDYLESELESFPEs------- 85  Leptospi...
CAE79184              2 MSRELERKLAEATELAKRNRHEFVTLEHILLILSESPVMV-EILEACA-VNVQKLKQDLRDHLKVGIPQITDeqlgsygg 79  Bdellovi...
AAS12644              5 VSLTVRRIFQDAVEDAKKRNHEFVTPEHLLWAIMFNPKAL-ELFTLSG-SDLGYIHDNLNTYLENKVPVRTQd------- 75  Treponem...
tigr:CJE1251          3 YQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFkDIFEEFSdGDLELLETELKNYISQNNQVIKQe------- 75  Campylob...
WP_006312562          4 FSPSLEKALHQALTFANERHHEYATLEHLLLALIDDADAA-AVMAACN-VDLDALRKTVSDYVDNELTNLVTg------- 74  Agrobact...
WP_010965130          3 LDEIVNEIITAAYSEAKFDMHKYFTPEHILYASLFYNDGI-NIIKNTG-GSVEGLKKQLEKYFMKNVEKLESg------- 73  Clostrid...
WP_013064452          6 QTKRAARMLSDTMKCCKEYRHEFIMPEHLLLVMMDDNEFY-NTLDSYY--SANLFQERIENKLDEVETV-PEd------- 74  Prevotel...
AAS96080             73 -MTTeVVQTLGVQRVLQRAFRHIQSAGRPLVEIGDVLAALFDEDDTYAVYFLKTQGVSRLDVLEYISHAMPEADDDAMDG 151 Desulfov...
CAG35615             73 -TEEeAVQTVAFNRVLQRALNHVKSCGKKEADAGDILVAIFGEKDSHAVYFLTSLGLNRMAVVSFIAHDIPSDNQQESLN 151 Desulfot...
CAE09487             73 -VTHdPFETLALSRVIESMLRHTRGAEKKEAGVGDLLAAIFEEEHSYSTYVLKSQGISRLDILEAITEQIHKEGSSAKEE 151 Wolinell...
chgcsh:AE010300_220  86 sGEVdPIYTIGVQHVLQLAEFHVQSTRNKKMDGGDVLAALFREDQSNAVYFLGSQDISRLDIVRYISHGIRKDSKKNPGK 165 Leptospi...
CAE79184             80 fESWtPEFTLACHRLIQRAAIQMKSAGRNQISEGSLLVSLFYEQDSHAAFALARQGLTQFDIINFISHGITKDGKDHDIP 159 Bdellovi...
AAS12644             76 -NQAePIQTVGLQNVFERAILNCNAAEKPVIGINDIIVSLMDEEKNHCSFFMKQSGIDRLRLLQLVSSPDFYDDGKNRSA 154 Treponem...
tigr:CJE1251         76 -----IEPTIS--VVLDEILLSSKNKN-NEIKIIDFLEKLIQDSRSYSSYLLKKHNINLNKIQELQNHENIQN------- 140 Campylob...
WP_006312562         75 -YDEdSKPTSGFQRVIQRAVIHVQSSGREEVTGANVLVAIFAERESHAAYFLQEQEMTRYDAVNYISHGIGKRPGTSQTR 153 Agrobact...
WP_010965130         74 ----dPTQTVGVENIINQAANHVLTSGKDYVTIGDIYVAIYDDNASFGSYYLKQQGITRLKLLNYITHGISAVNDSDEDD 149 Clostrid...
WP_013064452         75 -IDYePEASTQMGQLIEFACAQIINSSATALDVPHLVMGLLNLPESWACYLLKDALGD--NESNFMSDLISAYELADQLG 151 Prevotel...
AAS96080            152 DDegd----------------------ggaS--------TRADALAQYATDLTARAREGRIDPLIGREDELERTVQVLSR 201 Desulfov...
CAG35615            152 APakt----------------------peeT--------PGESALEKYTTNLTVNAAKGLIDPLIGRESELKRIMQVLCR 201 Desulfot...
CAE09487            152 EKre-------------------------------------esFLEKYTKPLAQEAKRGKIDPVIGREIEIERSLEVLCR 194 Wolinell...
chgcsh:AE010300_220 166 EMage-----------------------egE--------KISDPLRAFCVDLTAKAKEGKLDPMVGREDELDRTIHILCR 214 Leptospi...
CAE79184            160 SAsaprsae--------------yqaegmdE--------TRGSPLESFCVNLNERAKQGKLDPLIGREDVIERTIQVLCR 217 Bdellovi...
AAS12644            155 YEeaedvqeaqgvkedsarhnseekntdksK--------AQKTYLERFTVNLTEKARKGRLSPIIGREEEIERTIQILCR 226 Treponem...
tigr:CJE1251        141 --------------------------------------------LNNHTSDLTLLAQNGKIDPLIGRKFELERMMQILSR 176 Campylob...
WP_006312562        154 APrgadepeseskp----srgnpeedgssaK--------KQQDALKAYCVNLNDKARNGKIDPLIGRHDEVNRTIQILCR 221 Agrobact...
WP_010965130        150 IEplp-----------------------enEylfddyheDEVCAIDKYTEDITEKAKNGLIDPLIGREDILKKTLQVLCR 206 Clostrid...
WP_013064452        152 TGd--------------------------qQ--------KGQEAWRRLVTCMNTLYQQH--NPLIGCEQELQRTIQVLCR 195 Prevotel...
AAS96080            202 RRKNNPLFVGDPGVGKTAIAEGLALRIAVG----------AVPESFRKARVYALDMGSLLAGTKYRGDFEARLKAVISEL 271 Desulfov...
CAG35615            202 RKKNNPLLVGEPGVGKTAIVEGLARHIFEDslarrdgrktKFPELLHDTDIYLLDMGSLVAGTKYRGDFEKRLKAVISEI 281 Desulfot...
CAE09487            195 RKKNNPLLVGEPGVGKTAIAEGLALRIAQG----------KAPEILQKAEIFALDMGALLAGTKYRGDFEKRLKGVIEEL 264 Wolinell...
chgcsh:AE010300_220 215 RRKNNPIFVGEAGVGKTSIVEGLAQRVVDG----------KVPEPLKNLKVYSLDMGLLLAGTKFRGEFEERLKNVVAQI 284 Leptospi...
CAE79184            218 RTKNNPLLIGEPGVGKTAIAEGLAQKIVQN----------QVPEKLKNAVIYSLDLGGLLAGTKFRGDFEGRLKAVVKEI 287 Bdellovi...
AAS12644            227 KQKNNPIHVGGAGVGKTAITEGLAQRITAN----------KVPSFLKNANIYSLSLSDLLAGAKFRGDFEERLKRIVSEI 296 Treponem...
tigr:CJE1251        177 RKKNNPILVGEAGVGKTAIVEGLALAIAEK----------KVPKNLQNAKIFSLDMASILAGTKYRGDFEKRIKEILNEL 246 Campylob...
WP_006312562        222 RSKNNPLYVGDPGVGKTAIAEGLAKRIVEG----------KVPEALANDTIFSLDMGTLLAGTRYRGDFEERLKQVVKEL 291 Agrobact...
WP_010965130        207 RRKNNPIHVGEPGVGKTAITEGLATLIAED----------KVPTVLKGSKIYTLNMGTMVAGTKYRGDFEERIKNVLNEI 276 Clostrid...
WP_013064452        196 RDKNNPLHVGEPGVGKTALVWGLARMIEEDq---------NLPERLKGSKIYQLDLGTLLAGTQYRGDFENRIKQIMEGI 266 Prevotel...
AAS96080            272 SRQPDA-ILFIDEIHTIVGAGATSGGSMDASNILKPVLASGAIRCIGSTTHEEYRNHFEKDRALSRRFQKIDIGEPTQEE 350 Desulfov...
CAG35615            282 KEEENA-ILFIDEIHTIVGAGSTSEGSMDASNLLKPALQEGVLRCIGSTTYEEYKSHIEKDRALSRRFQKIDLPEPSVAD 360 Desulfot...
CAE09487            265 EGKPEA-ILFIDEIHTIVGAGATSGGSMDASNLLKPALGSGRLRCIGATTYGEFRNFFDKDKALSRRFAKIDVKEPTIED 343 Wolinell...
chgcsh:AE010300_220 285 TAQEDH-VLFIDEIHTIIGAGAVSGGSLDASNLLKPALSSGELRCIGTTTYKEFKTIFEKDHALSRRFQKVEVGEPSISE 363 Leptospi...
CAE79184            288 EKHPNA-ILFIDEIHTIVGAGATSGGSMDASNLLKPALASGDISCIGSTTHTEYRQYFEKDRALNRRFQKIDIHEPSKED 366 Bdellovi...
AAS12644            297 SREKNA-ILFIDEIHTIVNANSGGGG-IEAPDLLKPILANGKVRCIGATTFEEYNKHFTKDAALARRFQKIDIEEPNEEE 374 Treponem...
tigr:CJE1251        247 EKIPNA-ILFIDEIHTIVGAGSTGESHTDFSNLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEE 325 Campylob...
WP_006312562        292 EEFPGA-VLFIDEIHTVIGAGATSGGAMDASNLLKPALSSGAIRCIGSTTYKEYRQFFEKDRALVRRFQKIDVNEPSIDD 370 Agrobact...
WP_010965130        277 SKCEKP-IVYIDEIHTIIGAGAVSGGTVDAANILKPYFTDGKIKFIGSTTYDEYKKIFDKDRALSRRFQKIDVGEPTINE 355 Clostrid...
WP_013064452        267 QEESDKnIVYIDEIHTLVGAGATGEGAMDASNMLKPYLEAGGIRFIGSTTYEEYNRHFARSKGLVRRFQQIDIPEPTPEE 346 Prevotel...
AAS96080            351 CVEILKGLKEHYEEHHAVRYTLPALRAAVELSARYVNDRLLPDKAIDVIDEAGAamRLRAGFKPGAS------------- 417 Desulfov...
CAG35615            361 TQLILQGVKSQYEKHHNIKYSDESILAMAELADRYINERFLPDKAIDVMDEIGS--RFRLAGRKKAI------------- 425 Desulfot...
CAE09487            344 TIKILEGLKPQYEKHHEVLYLPEALEGAAKLSSRYIQDRFLPDKAIDVMDEAGAsfRMAGK--KGGK------------- 408 Wolinell...
chgcsh:AE010300_220 364 TIEILKGLLEKYESFHKVKYSSSAVEQAAELSARYILDRKLPDKAIDLLDEAGArvRLRES--GKKT------------- 428 Leptospi...
CAE79184            367 CVKILKGLRKSYEEFHQVSYSDEAIQASVELSQKHIHGKLLPDKAIDVLDEAGAyfRLKYENAEDIK------------- 433 Bdellovi...
AAS12644            375 AVKILKGLRESYENFHKVHYSDEVLESAVHLSAIHIRDRFLPDKAIDLIDEAGAliKIRADKEKNENeadekgleetalp 454 Treponem...
tigr:CJE1251        326 SLQILKGLKNKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDCAIDLIDELGAsfALNPKAKKNAN------------- 392 Campylob...
WP_006312562        371 AIAIMKGLKPYFEDYHHLRYSNEAIKAAVELSARYISDRKLPDKAIDVIDETGAaqMLLPASKRRKL------------- 437 Agrobact...
WP_010965130        356 TYDILMGIKTRYEQFHNVHYTNASLKAAAALSAKCINDRFLPDKAIDVIDECGAfaEMNRKDTEKVY------------- 422 Clostrid...
WP_013064452        347 TKHIVRQLRSQYESFHHVTYDEAALDFAVDASYKYVNDRFLPDKAIDLIDEAGAaaELKDGAQP-AN------------- 412 Prevotel...
AAS96080            418 -VSVQDVERVVARMAHVPPRSISSSD-RDRLKTLENDLGKAVFGQEAAVAVVARSILRARAGFGREDRPTGSFLFYGPTG 495 Desulfov...
CAG35615            426 -VRVKDVEEVVSEIARIPAKQTSASE-ANQLRHLDNSLRSVVYGQDNAIKALTTAVKRSRAGLGNPLSPTGSFVFSGPTG 503 Desulfot...
CAE09487            409 -VGLKEIERIVSKMAQIPDITVSVDD-REHLKGLEKRLQGRIFGQDSAISQIVSAIKRSRAGLNAPHRPVGSFIFAGPTG 486 Wolinell...
chgcsh:AE010300_220 429 -VTVREIEDLVSKIAKVPSVTVKADD-REKLKNLDEELKAKIYGQDSAIDQLVQSIRLSRSGLSEPGKPVGSFLFAGPTG 506 Leptospi...
CAE79184            434 -IGVPEIEEVIAKMTGLPVASISSSE-KTQLRDLDKKLKALIFGQDEAIDRLVANIKYARSGLGRPNKPIGSFLFTGPTG 511 Bdellovi...
AAS12644            455 eVSLSDIDKIVAKTAKIPEQRVSVNE-TEKLRHFEEILSKKIFGQDTAIEGVTKAVKRSRAGFRSKDKPVANFLFVGPTG 533 Treponem...
tigr:CJE1251        393 ---LKDLENVLAKMTHH-HKIFEFDQ-NKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGFKNSNTPRGVFLFTGSSG 467 Campylob...
WP_006312562        438 -ITEREIEATIATMARIPPKTVSKDD-EMVLANLEKELRSVVYGQDIAIEALATAIKLARAGLREPNKPIGSYVFSGPTG 515 Agrobact...
WP_010965130        423 -INVKDVENVISSISGIPVKDLSKTQ-IEKLKNLKKNLKSKIFGQDKALESIVQSIKRSSAGFNDENKPVASFLFVGPTG 500 Clostrid...
WP_013064452        413 -VNKVDIADVLAKTCKVDTMAMNSDDdNAQLETLAPRLLQKIYGQDEAIRQVVEAVQMSKAGLLDDNKPLASLLFVGPTG 491 Prevotel...
AAS96080            496 VGKTELARSLAKRLGVAFLRYDMSEYMEKHAVSRFIGAPPGYVGYDQGGQLTEAVRRTPYAVVLLDEMEKAHPDIFNVLL 575 Desulfov...
CAG35615            504 VGKTEVARQLAKQLGIHFERFDMSEYMEKHAVARLIGAPPGYVGFDQGGQLTEAIRKHPHCVLLLDEIEKAHPDIFSILL 583 Desulfot...
CAE09487            487 VGKTELAKELARAMGVHFERMDMSEYMEKHTVSRLIGAPAGYVGFEQGGLLTETIRKHPHALLLLDEIEKAHPDLLNILL 566 Wolinell...
chgcsh:AE010300_220 507 VGKTELTRKLAEILGVELIRFDMSEYMEKHTVSRLIGSPPGYVGFEQGGQLTDAVYRNPHCVLLLDEIEKAHEDIYNILL 586 Leptospi...
CAE79184            512 VGKTEVCRQLATIMGVHFERFDMSEYMEKHAVARMVGAPPGYVGYEEGGLLTEAVNKHPYCVLLLDEIEKAHPDITNILL 591 Bdellovi...
AAS12644            534 VGKTELAKTLAEELGIPLLRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTSAVQKSPNAVLLLDEIEKAHADIYNILL 613 Treponem...
tigr:CJE1251        468 VGKTELCKALAEFLGLNLERFDMSEYAEKHTISKLIGSPAGYIGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFL 547 Campylob...
WP_006312562        516 VGKTEVAKQLAASLGVEMLRFDMSEYMERHTVSRLLGAPPGYVGFDQGGLLTDGVDQHPHSVVLLDEIEKAHPDIYNILL 595 Agrobact...
WP_010965130        501 VGKTEISKQLAEALNIKLIRFDMSEYQEKHTVARLIGSPPGYVGYEEGGLLTDAVRKNPYCILLLDEIEKAHSDILNVLL 580 Clostrid...
WP_013064452        492 VGKTEVARVLAKELGIALLRFDMSEYTEKHTVAKLIGSPAGYIGYEDGGLLTDAIRKTPNCVLLLDEIEKAHQDIYNILL 571 Prevotel...
AAS96080            576 QVMDYATLTDNTGRKADFRNVVLIMTSNAGVREMSAPSIGFTGGG-V-EdvtaKGRKAVETLFSPEFRNRLDALVPFGSL 653 Desulfov...
CAG35615            584 QVMDHATLTDNSGRRADFRNVILIMTSNAGAREMTTTPIGFVQDK-T-T----KGKGAIKKLFAPEFRNRLDAIIAFDQL 657 Desulfot...
CAE09487            567 QVMDSATLTDNNGQKADFRNVILIMTSNVGSKEPS--VMGFKKEQ-S-L----KREGAIKEHFSPEFRNRLDAIIHFEPL 638 Wolinell...
chgcsh:AE010300_220 587 QIMDHATLTDNNGRKSDFRQVILVMTTNTGARERSTNPVGFANDL-L-Ed---RSLKAIEKQFSPEFRNRLTAVIEFSSL 661 Leptospi...
CAE79184            592 QVMDAGRLTDSNGRVADFKNVVLVMTSNAGALETSRGTIGLIDEN-R-Gs---LSMDAIKKAFAPEFINRLDAVVAFRDL 666 Bdellovi...
AAS12644            614 QIMDYATLTDNQGRKAAFNNIILIMTSNAGSSNIGKPLIGFGGER-I-Se--sAVDEAVEKTFTPEFRNRLDAIIKFGPL 689 Treponem...
tigr:CJE1251        548 QIFDNAELTDNSGLKVDFKNTIIIMTSNLGLKESNE--LGFLSKN-E-E----KSNRAIKDFFAPEFINRIDKILHFNDL 619 Campylob...
WP_006312562        596 QVMDHGSLTDHNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSR-R-Tg---EDEEAINRLFTPEFRNRLDAIIPFSPL 670 Agrobact...
WP_010965130        581 QVMDYATLTDNSGKKADFRNIILIMTSNAGASEVGKNKVGFGNRV-VgEd---NIDKEVSKIFSPEFRNRLDDIIIFNKM 656 Clostrid...
WP_013064452        572 QVMDYARLTDNKGRKADFRNVILIMTSNAGAQYAAQANIGFTGNTsR-Ge---AMLKQVKKTFKPEFINRLSGTVVFNDM 647 Prevotel...
AAS96080            654 APEVMERIVDKFVREVENGLRERRVRLELTAAARQRLAEKGFDPAFGARPLRRVIRTAIEDELAKEMLFGRLRKGGTVHV 733 Desulfov...
CAG35615            658 SIKSAEKVVGKLLTEISAQLADKNVSISLTAGAKKYLASKGYSPEFGARPLQRLILTEIGDVLSDEILFGQLKNGGSVKI 737 Desulfot...
CAE09487            639 SLEHLERIAQKQVDDLNLQLVEKGIVVKLDKKAKRYLAEKGYDEELGARPLGLLVQKEIKTPLTDEILFGSLKKGGEVKV 718 Wolinell...
chgcsh:AE010300_220 662 NQENVTKVVAKQLALLQERLNSKQIELEFNEDVLVYIADKAYTPEFGARPVQRWIDTHISKRISEEILFGVLKSGGKAKL 741 Leptospi...
CAE79184            667 SEDMVIRITQKFVDELKMTLLEKKVELNVSQDVIKWLMKKGYDKVYGARPLARCVDENLKKALVDELLFGRLVDGGRVSV 746 Bdellovi...
AAS12644            690 TMQVMSLIIKKEVEKIRSQLAEKEISLELEDDVIPLLAEKGYSEEFGARNAARLVEDEFVTPLTDMILFGETKKGSSVKC 769 Treponem...
tigr:CJE1251        620 NDAILVKIIEKELDEISKNLN--NIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISDEILFGKLKKGGIAKI 697 Campylob...
WP_006312562        671 PTAVIHKVVQKFVMQLETQLSERNVTFDLHEDAISWLAEKGYDEKMGARPLSRVIQEHIKKPLANEILFGKLKKGGVVSV 750 Agrobact...
WP_010965130        657 DEDMAIRVAKRSLDEFQQKLNKKHIKIKVTDECYKWIASKGLNSNYGAREILRVIQEKIKPYFIDEVLFGNLTKGGETLI 736 Clostrid...
WP_013064452        648 DHEMATLILKKKLSELQDKLTAKQVEMTLSDEAFKLLLDEGYTHEYGAREMDRVIAQRLKPLLMREILFGSLKQGGHIII 727 Prevotel...
AAS96080            734 DA 735 Desulfovibrio vulgaris str. Hildenborough
CAG35615            738 GC 739 Desulfotalea psychrophila LSv54
CAE09487            719 SA 720 Wolinella succinogenes
chgcsh:AE010300_220 742 IS 743 Leptospira interrogans serovar Lai str. 56601
CAE79184            747 EL 748 Bdellovibrio bacteriovorus HD100
AAS12644            770 QI 771 Treponema denticola ATCC 35405
tigr:CJE1251        698 KL 699 Campylobacter jejuni RM1221
WP_006312562        751 TV 752 Agrobacterium sp. ATCC 31749
WP_010965130        737 DV 738 Clostridium acetobutylicum
WP_013064452        728 ST 729 Prevotella ruminicola
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