3KDQ


Conserved Protein Domain Family
DIP1984-like

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cd12208: DIP1984-like 
Click on image for an interactive view with Cn3D
DIP1984 family protein and similar proteins
DIP1984 is an uncharacterized protein from Corynebacterium diphtheriae. Some members of this family may have been misnamed as septicolysin.
Statistics
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PSSM-Id: 411994
Aligned: 73 rows
Threshold Bit Score: 124.977
Created: 30-Sep-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Conserved Features/SitesClick to see Conserved Features Help
 
oligomer
Conserved site includes 44 residues -Click on image for an interactive view with Cn3D
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Structure:3KDQ: Corynebacterium diphtheriae functionally uncharacterized protein forms multimer, contacts at 4A
  • Comment:monomers oligomerize to form ring-like structures

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  #  #   #  #########       ##     ##      #  ##  ##  #              
3KDQ_A      4 XYLAEALAQRVEAQRRYSELNQLLLDVAKVQEGDqPAENPHEILTELEelttRINDLVRRINRTNSVTEFs--------- 74  Corynebacterium di...
CAY71270    1 MKLAEALIIRKDIYKNLKQLENRIRRNITIQEGTsAPENSNALLVEYNeqhkEYVGLVVKINLTNAKIFLkfyhpieeke 80  Pichia pastoris GS115
EGC69705    1 MKLAEALLLRRDLNNRLFQLRNEISSSVLVQEGDtLDRSITELFKEYDeinqQYSELVVAINRKNATASLa--------d 72  Enterococcus casse...
EGV42534    8 MKLAEALLLRSDLMKKIEHIQNRIRPVLIVSDDKkPQEDPAKLLAQLRtaiqDLESLVIRINKTNNENNIk--------- 78  Bizionia argentine...
ACN84260    1 MKLGEALLKKDEYVKKIDNLKKRVKNNVVMKEDNeNNEDPNDLIKEYIetnnELSDLIMKINNKENTTRLe--------- 71  Brachyspira hyodys...
EEI61709    4 MKLAEALLLRRDLESKLTLLREEIASSAVIQEGDtLDRSIDDLLLDYEttnqEFAQLVIAINQRNAVAKIg--------- 74  Enterococcus faeca...
EER35876    1 MNLIEALKLQSQLTKQTNELSVLIEKCCQAQEGDePPFDPNQLFQEYEdllqELIELSIRIQTTNNIIKFkyl----dnp 76  Candida tropicalis...
CCE39645    1 MKLASALKLRSNLKKQLSDLRSIISDGLVVQEGM-TKPNPNENYTKYVakldELEQLIININDTNIHTTVcf------kd 73  Candida parapsilosis
EDK45094    2 TSLGELLKQRSCLTNRASDIRLILYKSCKKQEGDdLPFEVDELYEQYEflqtRIMELSAQIQAANIGLEF---------- 71  Lodderomyces elong...
EER35875    1 MKLAEALKLREVLNSETSRIDSKIRQSLILQEGKtPLYNVDKKYDEFVakttELYRLAMSTNYTNNTVEIkdgt--lclt 78  Candida tropicalis...
Feature 1      ##   #   #  #      ## ##  ##       # #########       #                        
3KDQ_A     75 EGXTLADALSVRDALlkKRTLYSDLADQLTsrqdRYSRSEIKYVATXDAREIRKKADLAAKEYRQLDVDIQRLNWQTEL 153 Corynebacterium dip...
CAY71270   81 VEATMTEALALRDYLkeRSSALREFAAEASssraVLTRTEVRFKTTMKASDIQKEQDRTGKLLRQLDLKIQEKNWNAEL 159 Pichia pastoris GS115
EGC69705   73 SALLLMEALEQREQLrrKHALLTQALDETKaa-pRIGRNEIRLVRTIDTKTLTEQLNATAKQLRELDGKIQQTNWLVDL 150 Enterococcus cassel...
EGV42534   79 GEGSLMEALAKRDSLkmLSEKLRNIRYAAQ----INNSGDANLKTTIDIKKLQTEMDQTGRAFREIDSKIQELNWLTEL 153 Bizionia argentinen...
ACN84260   72 IGISISEAINIKDKLtrEIDIYKSILKEVNskdfRTAKNELKMKVLINVKDIQNEFDKLSKALNDIDIMIQSANWNTDL 150 Brachyspira hyodyse...
EEI61709   75 EQETIAAALEKREALrrSHAMLTATLEAAKva-pRMGRNEIRMIRTIDTKQITDRLNQTAKALRELDGQIQQTNWLVDL 152 Enterococcus faecal...
EER35876   77 TPRSMTQALADVSKLeaLRYSASRIVNNGIit-rGYSNKKIKDVAYADVVKYHKISNEFDKQLNSLSLSIQNANHEFEL 154 Candida tropicalis ...
CCE39645   74 QNVSISELILLKDEVisVIDILNSILQRSEeq-rIDDVACIRMVSVVDRDLYQTKLDAAKDEKLAIEMVLEEANCQVDL 151 Candida parapsilosis
EDK45094   72 DGKTMMEHIIEKDILrqHGDFLRDIIRESFp---STHTKEIRDVPTVDGKHYYDKYITISDRLNEVELKIQEHNWRDQV 147 Lodderomyces elongi...
EER35875   79 KAKTIGEVLIHRKFLkkKLELLEKIVEKGQek-dLESIDEIRFKSFVDIEVYDTKAEDVRKQIQELDTKLQELTWEIDL 156 Candida tropicalis ...

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