Conserved Protein Domain Family
reco

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TIGR00613: reco 
DNA repair protein RecO
All proteins in this family for which functions are known are DNA binding proteins that are involved in the initiation of recombination or recombinational repair. [DNA metabolism, DNA replication, recombination, and repair]
Statistics
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PSSM-Id: 273175
Aligned: 15 rows
Threshold Bit Score: 190.218
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8NWB5     3 MRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVktGLQAQTQLFVYGLFIYNQW---RGMGTLNSVDVISQHY 79  Staphylococcus aure...
Q88VS1     3 TNFNGILLFRRDYRERDMLIKFLTAEYGKKMFFIRGARRRgfKMAAELLPFTMGEYVGDLRd--QGLSYINSVKSVQYLE 80  Lactobacillus plant...
Q8RB48     4 LKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSksRFVNAVRPFIVANYVIFEG---QNYYYIDQWELVKNFE 80  Caldanaerobacter su...
Q97JI4     4 FKSRGVVLKSQDINENDKIIWIFTEKMGKISVIARGAKKNrsKYLPITINFCFGNFVFFKG---KSMFSLNEGEIIDSFQ 80  Clostridium acetobu...
CAE77091   3 KTLKGIVLNSFDFQDYDKIITIYSNLYGKISLVCLGVNKIksKNKYGINYLSYSNFEIFKSknkFNLSKLKRSELINSFN 82  Mycoplasma mycoides...
AAR33908   4 IRCEAVVLATMDYRESDRIVTLFTLCHGKVRGLARGARKSmrRFGGALEPFARLSVELVVR---EGLSSLRGVDIVTVYP 80  Geobacter sulfurred...
AAL95686   4 LRGKGIIIAKKDIEEADRYITIFMEDYGKVSTVIKGIRKSkkRDKTAVDILSLTDFQFYKK---NDSLIISNFSTVKDYI 80  Fusobacterium nucle...
AAS70675  10 KKIRGIVLESKTIQEGDALIRLLPEAGSVENFRIRGIRKSktRPIASVEPGSLSDVDYYHSk-nKETHNVKEISLINRFD 88  Leptospira interrog...
P44642     4 ELQRGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKrsSWKSVLQPFTPLLLRWTGK---STLKTLTKAEPAAITL 80  Haemophilus influen...
Q9Z7W5     3 ICVTGVVLRSRPLGKNHTLTTLFTP-EGLFTFFAKQGQTLqcDYRETLVPISLGKYTLHRNg--SRLPKLTHGDILNAFE 79  Chlamydia pneumoniae
Q8NWB5    80 KLQMDLFVSSYAS-LAAETIERSMDEGDIAPYNYQLLQFVLEKIESG-TSAQLMSVVVMLKCMKRFGFTASFNRCAVSGN 157 Staphylococcus aure...
Q88VS1    81 HISQDIALNAYAT-YVMNLMDVAFPDNQPVGRWYQQLTSALQLIDQD-VAPALVANVVEIQLLQPFGVAPELRWCTVCGR 158 Lactobacillus plant...
Q8RB48    81 NIEKDLKKFALAS-YISETISRVLEEKQKNTKLYFFTKHSLEAVESLnVETSIFLFSYTLKLISLLGYMPVLDSCAVCGK 159 Caldanaerobacter su...
Q97JI4    81 EFLSDFDTLTYCS-YLCELIDISMAEGESNRDLFKEFVSTFYLIKNKvGDIETLSRAFELKLLRYTGYNLNLDYCSKCKK 159 Clostridium acetobu...
CAE77091  83 HISTDFNLYLYAN-IITSLV-LSLDEQIKNYNLYKTLKLSISIINNKsDFGLKVCVLFMFYFLKIIGNQIDLSKCGFCNS 160 Mycoplasma mycoides...
AAR33908  81 RIRQDLAAIGHGG-YAVELVDRLLPDGASVPRLFRLLVSYLEHLDQG-GASPSDRRFFEANLLNILGYRLSLDACAACGV 158 Geobacter sulfurred...
AAL95686  81 GIKSDIDKINIAF-YIFSILNQILVENGRNRKIYEVLEKTLDYLNTS--NDERKNYLLILFFLNTLIKEEGISLEDN--S 155 Fusobacterium nucle...
AAS70675  89 RAKSGYLGTVLVS-YLVELASSFTPDGAEHPGEFRLLFGALEELEEN-GISILILPFFKLRLLVSGGFLSKELICHSCGA 166 Leptospira interrog...
P44642    81 PLQQ--IALYSGF-YVNELLTRVIESETPNPALFQHYLKCLTGLATE-TNIEPTLRLFEFQLLQILGYGVDFLHCAGSGE 156 Haemophilus influen...
Q9Z7W5    80 AIKQTYALLEASGkMIQALLASQWKEK-PSHKLFSLFLNFLHRIPES-SNPEFFAAIFVLKLLQYEGILDLTPACSLCKA 157 Chlamydia pneumoniae
Q8NWB5   158 dtQAD-LIGYSFKFDGAISRQEASKDVHAVILSNKTLYLLDVLQKLPIDKMNS-LNIHQEIIDEMSDIILMLYREYAG-M 234 Staphylococcus aure...
Q88VS1   159 --SDL-PLDYSESYGGLLCQQHWHLDPHRLHASPAAIFYLRQFSVLDLAKVHS-IKVKPRTAAELRRILDEIYQNSVG-V 233 Lactobacillus plant...
Q8RB48   160 --KEN-LSYFSSSCGGAVCKDCNETCKDAKFLNKKVLKFLLYLLKAKYEKLER-ISVPGVIKEEADKIITEYVRTHLE-M 234 Caldanaerobacter su...
Q97JI4   160 r-INS-ASYISYKYYGGICGDCSKEG--GMSVTPAAYSSLNYLSKLPIEKVYR-VNLNDNIKNEMFEILRGFISQNYA-K 233 Clostridium acetobu...
CAE77091 161 k-INP-IIAISFTNYCSSCKFCYFDD--CILIDNQLSNFINSIFKNDFITNLS-QEISTNNLNILTRFILNYYQDIVG-T 234 Mycoplasma mycoides...
AAR33908 159 efPAD-AARRAGAAGTVLCTGCGRYG---APLSAETVRLLHR--CLGTGRFGA-IVFPPEPLGEAGPLLDGAIGAHLA-R 230 Geobacter sulfurred...
AAL95686 156 --------N--MEE---LQVVVETQR--KVEIDDNVKRILQYLFEDNLKVVINdEKYKINYIRKAILVLENYINFHLD-T 219 Fusobacterium nucle...
AAS70675 167 elKEMtFVTLQTTPLELICGNCLYGD----RNDLGCVQWIQTFLMLRFRDLKE-REISVENILDLDRICNQMLEPILR-K 240 Leptospira interrog...
P44642   157 ----P--VDFSMTYR-----YREEKGFIASLVKDNLTFYGRDLLAFEALDFSD-----DAVRQAAKRFTRIALKPYLGdK 220 Haemophilus influen...
Q9Z7W5   158 s-----LPYACYRYQGHKLCKKHQHKQAISIEKEEEQILQAIIHAKQFSELLAiAEFPIAIAEKIFYLFDSLQEEKKS-E 231 Chlamydia pneumoniae
Q8NWB5   235 FFKSQKLINQL 245 Staphylococcus aureus subsp. aureus MW2
Q88VS1   234 RLKSKRFIDQM 244 Lactobacillus plantarum WCFS1
Q8RB48   235 DFKSKDFAMKL 245 Caldanaerobacter subterraneus subsp. tengcongensis MB4
Q97JI4   234 IPKSLDLLNII 244 Clostridium acetobutylicum ATCC 824
CAE77091 235 YTTSMYLLSTL 245 Mycoplasma mycoides subsp. mycoides SC str. PG1
AAR33908 231 PLNSLAFLRQL 241 Geobacter sulfurreducens PCA
AAL95686 220 NINAQKILWGA 230 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
AAS70675 241 KLKSAPTLYEA 251 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
P44642   221 PLKSRELFTQN 231 Haemophilus influenzae Rd KW20
Q9Z7W5   232 RNSSEDPYHEI 242 Chlamydia pneumoniae
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