Conserved Protein Domain Family
portal_HK97

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TIGR01537: portal_HK97 
phage portal protein, HK97 family
This model represents one of several distantly related families of phage portal protein. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. It functions as a dodecamer of a single polypeptide of average mol. wt. of 40-90 KDa. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
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PSSM-Id: 273677
Aligned: 15 rows
Threshold Bit Score: 275.026
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAA07104      44 VTPHDALQVSAVFASVRLLSETIATLPLSTYSKrg-gSRKEIVTPEWLDYPNAEPG-GMGRIDILSQTVLSLLLQGNAFL 121 Streptomyces ph...
AAK08267      52 DGYTKLSDSPEVRMAVDCIADLVSNMTIQLMQNg--eTGDKRIKNDLSRVVDIEPNkYLSRKTFIQWLVRSMLLEGNGNA 129 Lactococcus pha...
AAD38955      50 VTVDKAMKLSAVWACVRLISTSVAGLPLGVYERkadgSRVDARSFPLYDVVHNSPNdDMTAFQFWQAMVASMLLWGNAYA 129 Pseudomonas pha...
CAB63683      32 YLGISALRNSDVLTAVSIVSGDVSRFPLVITDSs---TDEVIDLANIEYLMNTKVNkRLSAYQWKFPMMVNAILTGNAYS 108 Lactobacillus c...
BAA31877      37 YKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN-----GQINYSDRIVNLLNTRPNpMYNGYIFKLVVFVSALLTSHGYI 111 Staphylococcus ...
AAL97121      27 kltnVVLKEDALYKCVNYLARIISKSTFRIKAP----EKLTENQKDWLYWINTKANpNQSASQFWVEVVQKLLVDGETLI 102 Streptococcus p...
WP_001506239  15 aDPETVLSFHAVFSCISLISQDIAKMRLRLMQTdvqgIRREKRQGDTARLCR-RPNaQQNRIQFFELWLNSKLRHGNTVV 93  Escherichia coli
WP_031876226  26 LSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEG----NR--IQKNDVYYKLNIKPNtDLSSDSFWQQVIYKLIYDNEVLI 99  Staphylococcus ...
WP_010905377  34 VDATEALKNSDLYAVTSLISSDIAGTRFIGNQV--------------FTSVLNNPShLTNAFSFWQTAILNLLLNGNVFL 99  Lactococcus lactis
KFH21281      47 LAREGFMRNPVAHRCVRLIAEAASTIPWLLYEG-----ATEHEAHPLLDLLT-HPQgAVEGGSFFERLYGHLLIAGNAYV 120 Brucella abortu...
CAA07104     122 AVRWQG--PNIVGLDVLDPTKIHVHMVmvdglRRKvfEAYDIDADGn--eVLLGWftprDVLHIPGMM----L-PGdFVG 192 Streptomyces ph...
AAK08267     130 VVKPQVsgDKIIGLTPISPYKVTFNVS-----DDD--LDYSITFDNk---EYDPS----TLLHFVLNPs---I-ERpFIG 191 Lactococcus pha...
AAD38955     130 EIRRAA--GRPAALDFLLPSRVDLECD-----ENGrlKYFYTTKKGar-rEIERT----NMLHIPAFT----L-DG-RIG 191 Pseudomonas pha...
CAB63683     109 RIVRDPitNEPAMFEFYAPSQTQVDTS------DPdnIIYR--FTPyn-sSMQKVcgfeDVIHWKFFSy---D-T--IMG 173 Lactobacillus c...
BAA31877     112 EITRDKt-GEPMNLTFRKTSEIELKSD-----ARGrlYYFHQRIDSng-nNIERNvkfeDMLDIKFYS----L-DG-ING 178 Staphylococcus ...
AAL97121     103 FVIPGK---GIYVADAFTQDKKLSGN-------K----FKVSRVQGq---TYEKIftfdQVIYLKNDN----S-DLmLKV 160 Streptococcus p...
WP_001506239  94 LKIRTPr-GQIKELRILDWNRVEPLV------ADDgeVFYRITPDRncgiTESVTvparEVIHDRFNC----FfHP-LVG 161 Escherichia coli
WP_031876226 100 VVSDSK---ELLIADSFYREEYALYd----------dIFKDVTVKDy---TYQRTftmqEVIYLKYNN------------ 151 Staphylococcus ...
WP_010905377 100 AILKGDn-SLMKELRLIPSNAITIDLT------DDtlTYEVNQFDDy--pSAKYNa--sEMIHVKIMAygvdT-LHnLVG 167 Lactococcus lactis
KFH21281     121 ERVDLPs-GR-MELHLLRPERVTVETD-----ADGwpQALVYRSGLas-rTIPVAgldaPGLHLKLFHp---L-DD-HYG 187 Brucella abortu...
CAA07104     193 CSPISYARESIGLALAAQKYGSKFFA-NGAMPGAVVEVP----GT-MSEEGLARAREAWRAANSGV-DNA-HRVALLTEG 264 Streptomyces ph...
AAK08267     192 TGYKVALKDIVGNLKQASVTKKGFMA-SEYMPNLIVSVD----SD-SDELSDEEGRENFEEMYLKR-KEAgKPWIIPEGM 264 Lactococcus pha...
AAD38955     192 LSAIRYGVDVFGSVMSAEDAANGTFK-N-GLLPTVAFKVd---rI-LQPAQREEFREYVKS-VSGA-MNS-GRSPVLEQG 262 Pseudomonas pha...
CAB63683     174 RSPLLSLGDEIGLQESGVSTLQKFFK-SGLKGS-IIKAKe---SR-LSAEARQKIREDFERAQAGA--DA-GSPIIVDAT 244 Lactobacillus c...
BAA31877     179 LSLLDTLSRTIESDNNGKDFLNNFLR-NGTHAGGILKMKg---VL-DNKKARDRAREEFHKSFSGT-KQA-GKVVVLDES 251 Staphylococcus ...
AAL97121     161 ESLWEEYGELLGHVINNQKIANQIRFtMTPPKDKVRERAq--eNS-DGGRQPKSDKDFFKRTIEKI-RTEsVVGIPVTAN 236 Streptococcus p...
WP_001506239 162 LPPVYAAGLAAMQGHHIQANSTYFFR-NGGRPSGVIEVP----GS-ITEENAKKLKGNWDSGYTG--ENA-GKTAILSNG 232 Escherichia coli
WP_031876226 152 -NKVTHFVESLFEDYGKIFGRMIGAQlKNYQIRGILKSA----SSaYDEKNIEKLQAFTNKLFNTFnKNQ-LAIAPLIEG 225 Staphylococcus ...
WP_010905377 168 HSPLESLTSEIGQQKEANRLSLSTLK-GALNPTSVVKVPq---GT-LSSEAKDSIRKEFEKANGGN---NsGRVMVLDQS 239 Lactococcus lactis
KFH21281     188 FPPLEAALMALDIHNAAGAWNKALLD-NSARPSGALVYApkegGN-LTEEQFERLKAELEEGYTGA-SGA-GRPLLLEGG 263 Brucella abortu...
CAA07104     265 AKFSKVA------MSPDEAQFLQTRQFQVPEIARIFGVPPHLISDAtnstswgSGLAEQNIAFTMFSLRPWLERIEAGFN 338 Streptomyces ph...
AAK08267     265 VNVQQIKp-----LTLNDLAINDAVTLDKKTVAGIFGVPAFLLGVG-------TYNKDEFNNFINTKIMSIAQVIQQTYN 332 Lactococcus pha...
AAD38955     263 ITPETIG------INPVDAQLLETREHGVIEICRWFGVPPWMIGQTdkgsnwgTGLEQQMLAFLTFSISSITNQIQQCVN 336 Pseudomonas pha...
CAB63683     245 MDYQPLE------VDTNVLNLINSNNYSTAQIAKALRVPAYRLAQNsp----nQSVKQLADDYIRNDLPFYFEPITSEFE 314 Lactobacillus c...
BAA31877     252 MTFDQLE------VDTEVLKLIRENKSSTREIAGVFGIPLHKFGIEta----nMSITDANLDYLS-TLKPYITCVCAELN 320 Staphylococcus ...
AAL97121     237 TNYEEYGskntgsVKSYVDDIKKLKDQYMAEFAEMLGIPISLLHGDi------ADNQKNYELLLEGPIESLITNIVDGLE 310 Streptococcus p...
WP_001506239 233 AKYSPTT------FSPVDAQTVEQLKMTAEIVCSVFRVPAYKIGVGhpp--ssDNVEALEQQYYSQCLQTLIESIELLLD 304 Escherichia coli
WP_031876226 226 FDYEELSngg-knSNMPFSELSELMRDAIKNVALMIGIPPGLIYGEt------ADLEKNTLVFEKFCLTPLLKKIQNELN 298 Staphylococcus ...
WP_010905377 240 ADFSTVS------INADVANYLNSMNWGRTQIAKAFGVSDSYLNGTgd----qQSSLDQIKDLYVNALNRFIEPLISELR 309 Lactococcus lactis
KFH21281     264 LDWKAMG------YSPQDMDFIEAKNGAARDIALAFGVPPMLLGIPgdn--tyANYAEANRAFYRLTVLPLIGRTAKAFG 335 Brucella abortu...
CAA07104     339 rLLFAETAdrfRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPD 396 Streptomyces phage phiC31
AAK08267     333 -KLIVEED---MYFSLNPRSLYNYSLTEMVSAGAQMTQLNALRRNEFRNWVGMPPDAE 386 Lactococcus phage bIL285
AAD38955     337 kRLLTAPErirYYAEFSLEGFLKADSAGRAAWYSTMAQNGFMTRNEGRRKENLPELPG 394 Pseudomonas phage D3
CAB63683     315 lKLLDDAQrhqYCIGFDTKSVNGLPIADVNTAVNGGLWTGNEGRAELGKKPLKDPNMD 372 Lactobacillus casei bacteriophage A2
BAA31877     321 fKFNDEYVn--REFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPG 376 Staphylococcus phage PVL
AAL97121     311 yAIFDKSEt-lEGSFIKVTGLKNYDLFSISSQADKLISSGFVFIDEVREEIGLPELPD 367 Streptococcus pyogenes MGAS8232
WP_001506239 305 eALETGe---nESTEFDVTTLLRMDSERRMKTLGESVKNTLLTPNEARKRENLPPLAG 359 Escherichia coli
WP_031876226 299 aKLITQSMy-lKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDN 355 Staphylococcus aureus
WP_010905377 310 iKCDS-------SIGVDMSPITDYSNSVFKADILNWVKEGIIEPTEAKTLLESKGII- 359 Lactococcus lactis
KFH21281     336 nWLGPLFGg-gLRLEHDID-RIEGLSAERESLWRRVSEASFLTDDEKRDAVGYQPRVG 391 Brucella abortus 544
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