2VDD


Conserved Protein Domain Family
type_I_sec_TolC

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TIGR01844: type_I_sec_TolC 
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type I secretion outer membrane protein, TolC family
Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins]
Statistics
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PSSM-Id: 273829
Aligned: 13 rows
Threshold Bit Score: 382.876
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2VDD_A        21 QAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRD-----A-NG-IN---S--NATS 88  Escherichia col...
P23598        20 QAMGLLDAWELALRNDAQLRAAGFERDAGQEEVAIGRAGLLPSLQYTYGANYSHSKVTqrdrtL-NNtTK---RdyDNYV 95  Erwinia chrysan...
P02930        21 QAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDa----N-G--IN---S--NATS 88  Escherichia col...
WP_011712238  28 APLTLQDAVLKALSSNPEVLASWENKQANTQLVRQARAGYFPTLDLAAGYGKEVTDNTt----T-RA-ANkgtTtmNRGE 101 Magnetococcus m...
WP_000951430  28 SAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAe----SsGN-RN---TdlTRKD 99  Vibrio cholerae
Q03027        23 FALGLLDGYHLALENDPQFQAAIQEHEAGRQYRALGRAALLPRLVYSYNRGRSWSDVTqtttrG-DFkED---RdyDSYV 98  Pseudomonas aer...
WP_011068960  30 lSETLTGALVKAYKNNAPLNSSRAGVRIQDENVAIAKSAYRPQITGSYNISRGKTPATd----Y-R----------TTGT 94  Brucella
WP_009877184  28 TKTDLISVYKEAVDNNADLAAAQADYLARKEVVPQARAGLLPQLGAGARVGDTRIAFDe----R-PA--T---VkrNSQV 97  Pseudomonas aer...
WP_011712403  38 EQHPFAAAVMQALQTNPDVRSSRASLDSAKEKPVGTTAALRPTITFTSTATHTASFYGt---------TK---SksDPRA 105 Magnetococcus m...
WP_023200132  58 GNLTLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDh----G------------YSPS 121 Salmonella ente...
WP_024248907  45 AQLSLQESILRAFARNPGVTQQAAQIGIGEAQIDEAKSAWYPHVGLTGNAGPSRQTDSs----------G---RldNNVS 111 Escherichia coli
WP_010919195  29 NAETLADAIALAYQTNPTLQQQRASARITDEGVVQAKTGFRPTVGATADITGANTNPAs----A--G-AD---VklSGSS 98  Caulobacter vib...
WP_011038435  20 HATDLLQVYEMARNGDPQLAVAESTRLVNREGQVQARAALLPQLNGAFDYSKAHREIEg----Q-DG-RI---Tt-SSRS 89  Xanthomonas cam...
2VDD_A        89 ASLQLTQSIFD-MSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFN 167 Escherichia col...
P23598        96 STLTLRQPLLD-YAAWARYQQGVTRKLMADQRFRDRSQDLMVRLYQSWSEALLAQEKLMLLDAQRRAYQEQLALNRRLLA 174 Erwinia chrysan...
P02930        89 ASLQLTQSIFD-MSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFN 167 Escherichia col...
WP_011712238 102 SSATVSQKLFDgLSTYTNVKRAKASDQSSLHAFDRTAEKVGRQAMEAFMERAKQQQILALTAENVQDHEETLKKLKALAA 181 Magnetococcus m...
WP_000951430 100 ATLTLTQLIWDgSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRAD 179 Vibrio cholerae
Q03027        99 STLSLQQPLFD-YEAFSRYRKGVAQALLSDERFRSQSQELLVRVLEAYTGALLAQDQIELARAQKRSYREQFQLNQRQFE 177 Pseudomonas aer...
WP_011068960  95 VGIQLNQMLFDgFQTRNNVAAAETQVFAQRENLRNDEQNTLYQAVAAYMDVYQLRQIAALREKNLAAMNEQVRAARARLD 174 Brucella
WP_009877184  98 VQATLSQPLFR-ADRWFQWQAAKETSDQARLEFSATQQDLILRSAETYFTVLRAQDNLATSKAEEAAFKRQLDQANERFD 176 Pseudomonas aer...
WP_011712403 106 YKLDLSQPIYN-KQLFVADEQAMPYVEAAKEDVQNTLQDTILSVAEVYVGLLEAQEVAALSVNNLKVTSSQLEATRARFE 184 Magnetococcus m...
WP_023200132 122 LVLSVSQMLYDfGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSD 201 Salmonella ente...
WP_024248907 112 YGITLTQLVYDfGKTNNDINLQTAARDSYRFKLMATLTDVAEKTATAYMEVSRYQALCDAAQRNIHSLENVYNMAALRAN 191 Escherichia coli
WP_010919195  99 AALSIIQPLYTgGRASAGVSAAEADVLSAREGLRAVEQGVLVSVVQAYVDVRRDQERLRIAKENVAVLQRQLEESNARFD 178 Caulobacter vib...
WP_011038435  90 SQIQGSQTIFN-WSQFSTLRAQREVAKAADFTLESANNDLITRTSAAYFQVLVGIESLAAAETNEAAAKKQFDYADKRLE 168 Xanthomonas cam...
2VDD_A       168 VGLVAITDVQNARAQYDTVLANELTARNNLDNAVEQLRQITGN---YypELAALnvENFKTD-KPQ---P--VNA--LLK 236 Escherichia col...
P23598       175 AGEGTQTDLRETEARYTVTEAQRIEQEDTLDAAMTDLENMMGSplqIq-DLSPLalDTLPDN-VTE---NrsLSQ--WRE 247 Erwinia chrysan...
P02930       168 VGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNy--Yp-ELAALnvENFKTD-KPQ---P--VNA--LLK 236 Escherichia col...
WP_011712238 182 GGQGKKADVQQTESRLFSAKDTLVQAKGKINIAGATYERVIGE------SPGMLatPALPKEnLPE---T--LDQ--ALE 248 Magnetococcus m...
WP_000951430 180 SGIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQ------EPVSLefPRADQN-AIP---Pt-LEN--ALN 246 Vibrio cholerae
Q03027       178 RGNGTRTDTLETQARFNLAQAQEIEARDSQDAALRELERLVGApleIa-DLAPLg-ERFQVR-PLS---PasYTA--WRD 249 Pseudomonas aer...
WP_011068960 175 VGEGTRTDVAQAEASRSTAIAALNAARADVKTAEATYMQVVGS---L---PDKLtpASAARH-LPQ---S--PSQ--AYA 240 Brucella
WP_009877184 177 VGLSDKTDVLEAQASYDTARANRLIAEQRVDDAFQALVTLTNRd-yS--AIEGMr-HTLPVV-PPA---P--NDAkaWVD 246 Pseudomonas aer...
WP_011712403 185 VGEITRTDVRQGEARVASAEAQVKSNQNAVSVSEAKYREVVGM---P--PPQQMpvPSVEDA-LMH---Rd-LDQ--LIA 252 Magnetococcus m...
WP_023200132 202 EGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGW---N--SLNGIn-NDFPAK-LAR---S---CE--TAT 266 Salmonella ente...
WP_024248907 192 AGLNSSSDELQAQTRIAGMRSTLEQYQAQMASAKAQLAVLTGV--------QPEaiAAPPAE-LAE---Q--PVS--LKN 255 Escherichia coli
WP_010919195 179 VGEITRTDVAQSQARLASAKASLSGAQAQLEVSRASYAAVVGQ---T--PGELApePSLAGL-LPA---S--VDQ--AFE 245 Caulobacter vib...
WP_011038435 169 VGLAPITDVHEARAQYDQARADTINARNTLKDYYQALTELTGQ---PvvGLRALp-ENFRPE-VPAaysN--VDQ--LVA 239 Xanthomonas cam...
2VDD_A       237 EAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTrgaagtqyddS----------NMGQNKV 306 Escherichia col...
P23598       248 LTVRHNAKLAVQRENVDYSRYEIERNRAGHLPTLDLVASTRNSLSESEYNYN----------Q----------KYDTQTV 307 Erwinia chrysan...
P02930       237 EAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTrgaagtqyddS----------NMGQNKV 306 Escherichia col...
WP_011712238 249 IAAQMHPLLLGSQQDLNAATFAKLKSRSSFMPSITLDLTASNNGNVSGTRG----------------------YAQAMSA 306 Magnetococcus m...
WP_000951430 247 MAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGS----------------------SDELSA 304 Vibrio cholerae
Q03027       250 LALAENPELASLRHAVDVARYEVEQNRADFLPRLGLYASTGKSKSGSENTYN----------Q----------RYETDSV 309 Pseudomonas aer...
WP_011068960 241 SALASHPGILATKYAVNAAGYNVKAKEGALLPTIGLTASASQLDTIAGTDMG----------D-----------GNTASI 299 Brucella
WP_009877184 247 TAVQQNLRLLASNYAVNAAEETLRQRKAGHLPTLDAVAQYQKGDNDALGFAN----------SaanplvhygkYVDERSI 316 Pseudomonas aer...
WP_011712403 253 QAEAHRPDLLAAQERLKVDQLGVNYARAGHYPTLTFSANGTFTDDAEISTKT----------Q----------DSRAYTF 312 Magnetococcus m...
WP_023200132 267 PDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHE----------Vl---------DKTQYST 327 Salmonella ente...
WP_024248907 256 IDYQSIPLVLAAENLRQSAQYGVEKTKAQYWPTLSIQGGKTRYQTSDRSYWD----------D---------------QL 310 Escherichia coli
WP_010919195 246 AAQTNNPGVTSAKFNEEAAAARVAVAKAGYRPTVSARASLGYDATRRSGVGSqf-------dD----------YSRTVSG 308 Caulobacter vib...
WP_011038435 240 SAIADNPALKAQQLQVSAAEASINAARAGHLPTVNLTGSVGRSNSWGTGAAE----------Sgvft--tqgrDIDTDSI 307 Xanthomonas cam...
2VDD_A       307 GLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGFS- 385 Escherichia col...
P23598       308 GLQVRVPLYSGGAVSASMRQAAAEYQQSQAELDNQTRQTFAELRRQFNLCANGAAKIRAWQMSVAAAEEAIRATRQSVA- 386 Erwinia chrysan...
P02930       307 GLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYS- 385 Escherichia col...
WP_011712238 307 MLNMKYNIFNGGSDLAAYRESDHRINQTRETLSLNQRTVREQVITAWEQMEMAKHSVALVEKQVKAQQDTVKSYLQEFE- 385 Magnetococcus m...
WP_000951430 305 MLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQ- 383 Vibrio cholerae
Q03027       310 GIQLSVPLFSGGETLAATRQATHRMEKSHYDLDDKVRETLNQVRKMYNQSSSSAAKIRAYEMTVDSARTLVMATRKSIA- 388 Pseudomonas aer...
WP_011068960 300 GVGVNIPIYTGGRTSAQIRQSKEQLGQARIEVDVVQDKVRQAISSAWSQLEAARASVAANRDGIAAAQLALDGVIEERK- 378 Brucella
WP_009877184 317 GLELNIPIYSGGLTSSQVRESYQRLNQSEQSREGQRRQVVQDTRNLHRAVNTDVEQVQARRQAIISNQSSLEATEIGYQ- 395 Pseudomonas aer...
WP_011712403 313 VLTAEVPVYEGGGTQSTLRQAKHTLAASRADLDSQVLQIRREVEEALLNYRSALAVVTSYESALAASQDALNGVEQEFQ- 391 Magnetococcus m...
WP_023200132 328 WVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLd 407 Salmonella ente...
WP_024248907 311 QLNVNAPLYQGGAVSAQVQQAEGQQKISASQVEQAKLDVLQRASVAYANWTGARGREEAGLAQSESAHKTRDVYQNEYK- 389 Escherichia coli
WP_010919195 309 AITASIPLFAGGLTTSQVRAANERESAARSAVEGAKRTAIQQVSNAWSNLLASRAGLVANEEQVRATRIAFEGVRQEQQ- 387 Caulobacter vib...
WP_011038435 308 GISVSIPIFAGGATQSAVRQAISQRDIQQDTYEQQKRALDRNTRNAYQTVVAGISEVEARRLSVVSAQAAYDASQVGLE- 386 Xanthomonas cam...
2VDD_A       386 VGTETIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSK 443 Escherichia coli K-12
P23598       387 GGERINLDVLMAEQEWYNARRELTEVKYRWLQAWLNLRYTAGTLNEQDMMQLAAWFQS 444 Erwinia chrysanthemi
P02930       386 VGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSK 443 Escherichia coli K-12
WP_011712238 386 LDKRTHLDVLNAKNELYRARVQQVSGNFDYIMRVYQLWSAMGVMRENMGLHQTPVMAK 443 Magnetococcus marinus
WP_000951430 384 IGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNLLDALRVDIPQEWTA 441 Vibrio cholerae
Q03027       389 AGVRVNLDLLNAEQALYSAMNELSKAKYDYLTAWARLRFYAGVLDEADLELVAANFVS 446 Pseudomonas aeruginosa PAO1
WP_011068960 379 VGQRTTLDVLNAQNDLVAVQIALVQAEHDVVVASYALLNATGRMTADQLGLQVAQYKP 436 Brucella
WP_009877184 396 VGTRNIVDVLNAQRQLYAAVRDYNNSRYDYILDTLRLKQAAGTLSPADLEALSAYLKQ 453 Pseudomonas aeruginosa
WP_011712403 392 VGTRTALDLLDQQNEVFRNQTELAKQRFNVILARFRLLSATGELTLANLGLTQEVASK 449 Magnetococcus marinus
WP_023200132 408 LGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSV 465 Salmonella enterica
WP_024248907 390 LGKRSLNDLLTVEQDVFQAQSAEINANYDGWVAAVNYAAAVNNLIPLAGIKQGLYNDf 447 Escherichia coli
WP_010919195 388 VGLRTTLDVLNAQLELSNAELALVSARRDEYLASAVVLQAMGQLEVTKLASNTAAYDP 445 Caulobacter vibrioides
WP_011038435 387 VGTRTVLDVVQNQRTLFQAQQLYAQARYTFLQNRLLLAQAIGKIDIAELQDVNRLLSV 444 Xanthomonas campestris
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