4V96,6V8I,6V8I


Conserved Protein Domain Family
BppU_N

?
pfam10651: BppU_N 
Click on image for an interactive view with Cn3D
BppU N-terminal domain
This is the N-terminal domain of baseplate upper proteins (BppU, also known as ORF48) which is found in phage from a number of different bacteria. The N-terminal domain exhibits a beta-sandwich immunoglobulin fold.
Statistics
?
PSSM-Id: 431419
Aligned: 23 rows
Threshold Bit Score: 90.8466
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4V96_AA          4 H-FITLSTTEPNnn------------------iGIVKLRHADVNSQAIVAQI-VENGQPKNFEGLQPFFCLMAQ------ 57 
Q894K1           5 F-DLLIDTKRTGf-------------------nTIRGLKEGD-NNSVLNITL-VQNSIPFDLTGLTVRINYKRP------ 56  Clostridium t...
jgi:Clopa_2781   6 Y-NITLDLKGNNsk------------------iEQIRATVGDSKSIQLNISV-IVDTIPFDLTDHTAKITFTKA------ 59 
WP_015613966     5 Y-NATFDLKGNNsk------------------iDNIKCTVGDTNAYQLNVSI-IIDKDAANLTGHTAKITFTKA------ 58  Clostridium p...
WP_015615132     5 Y-NATLDLKGNNsk------------------iEPIRATVGDSKSIQLNINV-VIDTTPADLTGHTAKITFTKS------ 58  Clostridium p...
WP_011101127     3 NqELVYDITKQPnlq---------------paqQAIYARVGDGGLKTVTVKL-NANNYPYDLTGKHVNFEGVKA------ 60  Lactiplantiba...
BAK21829         3 Y-DLYFDLNKNQteq---------------psqQLITARVGDGGLRAITVKV-TENGIDKNISGMTPVFEGLTA------ 59 
Q03G10           3 M-YLKFRIGKDKrklvpingfe--lkdadsnnpQWLQGRQNEDGGRQVFVDLeDENGSPVNLTGASAVFKGVLPggqyki 79  Pediococcus p...
Q830H6           4 W-QATLSTTEPYny------------------iGIQNVRQGNRNTEVLEAIL-VENALPLDLTGCEVFFEs--------v 55  Enterococcus ...
WP_011475959     3 Q-ILKYVIGKDYrpltaleakggntftpdydksNWVQARQYEDSLRQVFVEItNEDGSAYDLTGANVLFEGILPdnehki 81  Ligilactobaci...
4V96_AA         58 EaTGQgvseESvvsfDAKNGTLKYVASDNaLQFVGRNE-AYFSFRKqE-GgrwiEQFSTRTFHYIVEKSI-YSQPF--KD 132
Q894K1          57 --DNKlflqMVdv-iNPTEGEIKVNILTKvLETVGEVK-ADLSIFDkD-N----RKITSVTFNMFVDASIyRNDYI---- 123 Clostridium t...
jgi:Clopa_2781  60 --DDTdvvdDLvidgDPVNGKLSYIVKNQaFSYPGQIK-TEIEIFDaI-D----GRISSNSFCFTARTGQlEGTTI--VS 129
WP_015613966    59 --DKTkvfdDMii-dDAVNGKMYVIFKSQvIAFAGRVD-ADIEIYDsS-N----GRLTTGSFAFMVGTGQlDDTAI--VS 127 Clostridium p...
WP_015615132    59 --DDTtvfdNLii-dDAINGKMHVVISNQaFAAVGQVN-AEIEIFDaT-D----GRLSSNAFAFTARKGElNDGTI--IS 127 Clostridium p...
WP_011101127    61 D-STRiidtSGgivlDPQGGIFRYVFPAQtFTARGRFQqAFFKVML-G-D----KVDTTIDVVVDVSPNL-VEFGI--NS 130 Lactiplantiba...
BAK21829        60 D-GHHiidkGNslvlDPQSGVFRYIPPEEvFAVKGNYQqAFFKLMR-G-D----QTDSTLEFTINVMDNK-VEFGI--NS 129
Q03G10          80 W-DHK-----SstiiDAQAGRFRYTFPKRaMAIAGSYKqAFFEIFR-E-G----TRLATLEFNFEVLADL-VEENI--IP 144 Pediococcus p...
Q830H6          56 I-DNKypiqRAakivNAKKGIIQYTFDEYsMQSLHRQE-AYFSIHK-GdN----LIGSTQNFSYFVVNAA---SKTegEM 125 Enterococcus ...
WP_011475959    82 L-DNS----HAvfyeDPTTGKFRFDMPAQsFSVAGQYKqAFFRVMK-D-Y----RNIATLEFKFEVLADM-VVTGL--VP 147 Ligilactobaci...
4V96_AA        133 SNYWWTFKELYRIFNK 148
Q894K1         124 --EPEDLDLIQSVYTE 137 Clostridium tetani
jgi:Clopa_2781 130 SDEFPMLTQALAEVTD 145
WP_015613966   128 TNQFTALDTALAEVTD 143 Clostridium pasteurianum
WP_015615132   128 SSQFTALDLALVEVTD 143 Clostridium pasteurianum
WP_011101127   131 ESYLSEYEQLISELKD 146 Lactiplantibacillus plantarum
BAK21829       130 KDYVSDYQLLVQQLQQ 145
Q03G10         145 SDYITPFEDLYGKLKE 160 Pediococcus pentosaceus ATCC 25745
Q830H6         126 GSYWQSIEDLIADMTA 141 Enterococcus faecalis
WP_011475959   148 RDYISPLDDLFNTIKE 163 Ligilactobacillus salivarius
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap