2F7V


Conserved Protein Domain Family
M20_ArgE

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cd03894: M20_ArgE 
Click on image for an interactive view with Cn3D
M20 Peptidase acetylornithine deacetylase
Peptidase M20 family, acetylornithine deacetylase (ArgE, Acetylornithinase, AO, N2-acetyl-L-ornithine amidohydrolase, EC 3.5.1.16) subfamily. ArgE catalyzes the conversion of N-acetylornithine to ornithine, which can then be incorporated into the urea cycle for the final stage of arginine synthesis. The substrate specificity of ArgE is quite broad; several alpha-N-acyl-L-amino acids can be hydrolyzed, including alpha-N-acetylmethionine and alpha-N-formylmethionine. ArgE shares significant sequence homology and biochemical features, and possibly a common origin, with glutamate carboxypeptidase (CPG2) and succinyl-diaminopimelate desuccinylase (DapE), and aminoacylase I (ACY1), having all metal ligand binding residues conserved.
Statistics
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PSSM-Id: 349889
Aligned: 34 rows
Threshold Bit Score: 304.515
Created: 21-Jun-2005
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
metal bindingputative dimer
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 6 residue positions
Conserved feature residue pattern:H D E E E HClick to see conserved feature residue pattern help
Evidence:
  • Structure:2F7V: Xanthomonas campestris acetylcitrulline deacetylase binds one Co(II) ion; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
2F7V_A     13 EHLETLVSFDTRNppr-------aiAAEGGIFDYLRAQLP----GFQVEVIdhg----dgAVSLYAVRGT---------- 67  Xanthomonas campes...
Q9K4Z7      8 ELYKSLILTPSISslek-----eldISNKPVIDLLAAWFSe--lGFSINITsvpe--tngKFNLVATYGQg--------- 69  Moritella profunda
Q7MH69      8 DVYRGLISTSSISssdp-----swdQGNQAVIEKLSDWFSalgfDVDVTEVep------gKYNLLAQKGQg--------- 67  Vibrio vulnificus ...
O68873     10 ATLTELVAMDTTSf-----------RPNVPLIDYAQARLEa--aGFSAERQkflddagveKVNLVAVKGGsgs------- 69  Myxococcus xanthus
AAQ82443    8 DQFAALIAVPSVSctqp-----sldQSNRPVIDLLAGWLGd--lGFACDIQqvs----pgKFNLLATYGTg--------- 67  Pseudomonas syring...
P57155     10 EVYKSLIQIPTISsnnk-----lldQSNKNFIDLLSNYFSdlnfSVKNYQIph-----tdKYNMLACVGSg--------- 70  Buchnera aphidicol...
NP_868718  21 RLLSELIAYPTVSh-----------TSNGAITEWVADRLRa--qGFECEQTryldgegvpKFNLIAKRLPtgsgsesgnl 87  Rhodopirellula bal...
ADB16470    7 ATLADLVRIPSVNpmgra--tsgdiYYEHRVTDYLEQLFRt--lELPYERVlvs----eqRPNIIARVDGdlpp------ 72  Pirellula staleyi ...
ADV61563   24 DLLTRLVAIPSINpmgraialddplHREGRMGDFLAGWLEa--rGIPYQRQeaq----pgRPNLVARYDApa-------- 89  Isosphaera pallida...
ACZ39634    8 ELLAQLVAIESVNpayp-----gpaSGEAAIAGFVADFCRaagaEVRTREIlp------gRPNVVATLRSgr-------- 68  Sphaerobacter ther...
Feature 1                            #                                  #                     
2F7V_A     68 ----------------PKYLFNVHLDTVPd-SPHWs---aDPHVMRRTEDRVIGLGVCDIKGAAAALVAAANAG------ 121 Xanthomonas campes...
Q9K4Z7     70 ---------------dGGLLLAGHTDTVPfdDGLWt---kDPFQLTEKDDKWYGLGTIDMKGFFAFVLEACKNIdlt--k 129 Moritella profunda
Q7MH69     68 ---------------eGGLLLAGHSDTVPfdQGRWs---fDPHQLTEKDNKFYGLGTADMKGFFAFIYEAAKRMdwk--g 127 Vibrio vulnificus ...
O68873     70 --------------grAALALVGHSDCVPy-DAAWt----DALRLTEKDGRLYARGACDTKGFIACALHAALNAeq---- 126 Myxococcus xanthus
AAQ82443   68 ---------------pGGLVLAGHSDTVPfdEALWk---tDPLKLTEVDGRWVGLGSCDMKGFFALVIEAVRGLldq--p 127 Pseudomonas syring...
P57155     71 ---------------nGGLLLSGHSDTVDfdEKKWt---kDPFKLTETNNKFYGLGAVDMKGFFALILEVISSInik--k 130 Buchnera aphidicol...
NP_868718  88 stqsvdrlelgrpeneIGLAYFCHTDVVP--ADRWggpggNPFEAVIEDNRLYGRGACDMKGSLAAMLAAIDGLdas--k 163 Rhodopirellula bal...
ADB16470   73 ------------eqggKVLMFEAHQDTVPieGMTI-----DPFDPKIESGKLFGRGSCDIKGGMSAMLGVVARLhrekpr 135 Pirellula staleyi ...
ADV61563   90 --------------arRTLLFEVHLDTVPveGMTI-----DPFGGEQRDGRLYGRGACDVKGALAAMLLALARLarerpp 150 Isosphaera pallida...
ACZ39634   69 --------------pgPALVFEAHLDTVGilDMGE-----AALRPRIEGDRLYGRGACDVKGGLAAMLAALAKLaprrde 129 Sphaerobacter ther...
Feature 1                 ##                                     #                            
2F7V_A    122 -DGDAAFLFSSDEEANDpRCIAAFLARGl--------------PYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHAS 186 Xanthomonas campes...
Q9K4Z7    130 lDKPLRILATADEETTM-AGARAIAAAKs-------------fRPDYAVIGEPTSMVPVFMHKGHMSEAIRITGRSGHSS 195 Moritella profunda
Q7MH69    128 qNKPLYVLATCDEETTM-LGARHFSAHTp-------------fKPDYCIIGEPTSLVPVRGHKGHVANVVRVTGKSGHSS 193 Vibrio vulnificus ...
O68873    127 lKAPLMVVLTADEEVGL-TGAKKLVEAGl-------------gRARHAIVGEPTRLIPVRANKGYCLAEVEVRGKEGHSA 192 Myxococcus xanthus
AAQ82443  128 fKQPLLILATCDEESSM-AGARALADAGr-------------pLGRAAVIGEPTGLKPIRLHKGVMMERIDILGRSGHSS 193 Pseudomonas syring...
P57155    131 iNKPIYILATANEETDM-SGARNFIQSTi-------------iKPDCIIIGEPTSLKLINAHKGHMSYSIKVIGDTGHSS 196 Buchnera aphidicol...
NP_868718 164 qSAPLWLVCTADEEVGL-RGAKELAQNSpayr-------eivsCDPVALIGEPTELRVVHAHKGMGGFRVISHGKAAHSS 235 Rhodopirellula bal...
ADB16470  136 gRPTVVMACTVNEEHGF-TGATHWARAYagfegnpptsrmlqrVPDATIVAEPTSLDVVVAHKGGVRWRCHTVGRATHSS 214 Pirellula staleyi ...
ADV61563  151 gSASVILAMVSDEEFTH-AGVSHLVTTGvv------------rDIDLAIVAEPTGFDLVNRHKGTARWRIRTRGVACHSS 217 Isosphaera pallida...
ACZ39634  130 lPQDLVLAAVMDEEATF-QGVRGFLDEGl--------------PIAAAVVAEPTELRVVIAHKGCVRWRIRTVGRAAHSA 194 Sphaerobacter ther...
Feature 1                                                                                     
2F7V_A    187 GKqdpAASALHQAMRWGGKALDHVEs------lAHARFGglTGLRFNIGRVDGGIKANMIAPAAELRFGFRPLPSm---- 256 Xanthomonas campes...
Q9K4Z7    196 DPa-nGINAIEIMHQVTGQLLQLQRklk--eqyACDHFVi-PQPTLNFGHVHGGDSPNRICGSCELHIDMRPIPGvnpde 271 Moritella profunda
Q7MH69    194 DPs-lGVNAIEIMHEVLFALMQLRDtli--kqyHNPGFAi-PSPTLNLGHIHGGDSANRICGCCELHYDVRPLPGisl-- 267 Vibrio vulnificus ...
O68873    193 YPd-sGASAIFRAGRFLQRLEHLALtvl--redLDEGFQp-PFTTVNVGVIQGGKAKNVIPGACRFVVEWRPIPGqpp-- 266 Myxococcus xanthus
AAQ82443  194 DPs-lGHSALEAMHDAISELKGLRTqwq--akyRNPQFTv-PQPTLNLGCIHGGDNPNRICGQCSLEFDLRPLPGmdpem 269 Pseudomonas syring...
P57155    197 NPd-hGVNSIEIMHDVIRSLLILKKyfk--eeyQHPNFSi-PYPTMNLSSIHGGSAINRICPLCILNFEIRPIPGltltq 272 Buchnera aphidicol...
NP_868718 236 TDr--GINANVAMIPLLQTILELHErvqtdpmlRDDRFDp-PTLTFNFGISDHADATNIVPDRSEVWANWRTMPNvdg-- 310 Rhodopirellula bal...
ADB16470  215 QPh-lGENAIYAMARLLPSFEKYALeva--ptlGSHHLC--GKPTLSVGTIKGGISVNTVPDRCTIEIDRRLLPGesp-- 287 Pirellula staleyi ...
ADV61563  218 TPe-lGRNAVYAMAPVVMGLEAHARa------lRRPDLDl-GGPTLSVGTIHGGVSVNVVPEECVIEIDRRLMPGess-- 287 Isosphaera pallida...
ACZ39634  195 RPd-eGLNAIDQMAEVVRALRRELQprl---amRSHPLL--GRPTLSVGTIAGGTGVNVVPAECVIEVDRRLIPGetgas 268 Sphaerobacter ther...
Feature 1                                                                                     
2F7V_A    257 ---dVDGLLATFAGfa------dPAAAHFEETfrgp-slpsGDIARAEERRLAARDVADald----lpIGNAVDFWTEAS 322 Xanthomonas campes...
Q9K4Z7    272 lfmlLNQALLPIMKq-------wPGAVDVYHLhepi--payACDTDSALIKLAEKLTGE---------TVIPVNYCTEAP 333 Moritella profunda
Q7MH69    268 --dgLDNLLRGALKeve---akwPGRIEIVPLhepi--pgyECQHDHPFIHGIEDLCGT---------PSQTVNYCTEAP 331 Vibrio vulnificus ...
O68873    267 --erVSQLLETIRQelvrdepafEAQIRVVRTdr-----gvNTRADAEVVRFLAEASGN---------APETVSFGTEAP 330 Myxococcus xanthus
AAQ82443  270 lrsaIRQKLQPLAEl-------hQVQIDYAPLfpec--apfEQIADAELVRVAERLTGH---------TAAAVAFGTEAP 331 Pseudomonas syring...
P57155    273 ieivIKEKLETIMKk-------wSHRIFIKKLfssv--payECPHNSGTIKIVEKLCQL---------NSAAVNYCTEAP 334 Buchnera aphidicol...
NP_868718 311 --ecLMEDAKVAAEqlg---lqfRGYKSVAPL---------ETSIDDPTLMRMCELASSycg----reKPETVCYATDGA 372 Rhodopirellula bal...
ADB16470  288 -etaRQHVIDYLAAqv-----pnVRPVHDEPFlts---fglADDCNGTLASELAAASKLhgg----rgGKIGVPYGTDAP 354 Pirellula staleyi ...
ADV61563  288 -reaIDAANRAVLEtpg----vdPTQTSFEPPwi-----vsPALEEHASWEWLGPLADSiertlgrrpAVRGVAFGTDAG 357 Isosphaera pallida...
ACZ39634  269 alaeVDAVLADLRRa--------EPWITVEREepwivdgclDTSPDAPIVRAALAACRQagy----pgEPTGVPYGTDAS 336 Sphaerobacter ther...
Feature 1                         #                       
2F7V_A    323 LFSaGGYTALVYGPGDIaQAHTADEFVTLAQLQRYVESVNRIIN 366 Xanthomonas campestris
Q9K4Z7    334 FIH-TGCDTIVMGPGSInQAHQPDEYLDLSAIKPTQAIIQKLIE 376 Moritella profunda
Q7MH69    332 FLQ-QLCPTLVLGPGSIdQAHQPDEFLAFDFIDPTIDVLSKAMR 374 Vibrio vulnificus YJ016
O68873    331 QMTeLGAEAVVFGPGDIrVAHQTGEYVPVEDLVRCEAVLARAVA 374 Myxococcus xanthus
AAQ82443  332 YLQrLGCETLVLGPGDIaCAHQPGEYLEMSRLDPTVRLLRQLIE 375 Pseudomonas syringae pv. syringae
P57155    335 FLQ-RIAPTLILGPGSIeQAHQPDEYLEHYFIQPTKNIITKLIN 377 Buchnera aphidicola str. APS (Acyrthosiphon pisum)
NP_868718 373 VLG-ELQHRIVCGPGSIeQAHTVDEFIELDSLENGVSLFRDAIQ 415 Rhodopirellula baltica SH 1
ADB16470  355 RFAqTGCPTVVFGPGSIdQAHTCDEWIEISQLQAASEILYDFAA 398 Pirellula staleyi DSM 6068
ADV61563  358 VLNqAGIPCVVLGPGDIaQAHTKEEWISLVQLCQAVEVYDRLAR 401 Isosphaera pallida ATCC 43644
ACZ39634  337 KFAaRGIPSIVLGPGSIaHAHSAHEFIPLPELRHAVEIYAQIAL 380 Sphaerobacter thermophilus DSM 20745

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