5MRC,6YW5


Conserved Protein Domain Family
MRP-S28
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pfam10213: MRP-S28 
Mitochondrial ribosomal subunit protein
This is a conserved region of approx. 125 residues of one of the proteins that makes up the small subunit of the mitochondrial ribosome. In Saccharomyces cerevisiae the protein is MRP-S24 whereas in humans it is MRP-S28. The human mitochondrial ribosome has 29 distinct proteins in the small subunit and these have homologs in, for example, Drosophila melanogaster, Caenorhabditis elegans, and in the genomes of several fungi.
Links
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Statistics
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PSSM-Id: 463002
Aligned: 17 rows
Threshold Bit Score: 137.892
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5MRC_YY 125 EY--KRPsPE-SHPVTYRYTSYVGEE----HPN-SRKVVLSVKTKEL-GL-EEKSLHKFRILARSRYDHT--------TD 186
Q09705  103 SF--KKP-AD-SQIFRFESDVQMSSF----EKM-NPKVVVTFKVTNIpLL-EEKQRHVLRLLVGPRYNPE--------ED 164 Schizosaccharomyces ...
Q6C9T8  244 PFdvKEA-DKkASPLTFKYTSYTGEE----ADE-EAKVVCYFDPANL-GL-SDKGLHKFKLLSGQNYDAL--------TG 307 Yarrowia lipolytica
Q6BHR9  152 EY--KPE-PTkDSPIKLSFNSDFSDGs---NSL-NRKVTLLCNIEDL-NL-NEKQQRKFKILATNRFNHH--------TN 214 Debaryomyces hansenii
Q5AI30  149 PY--TPR-PRtEAPIRLTYNSDFTDDtssaH---NRKVALKVSLRDL-NL-NPKQQHKFKVLAGDKFNHD--------ED 212 Candida albicans
Q750S9  156 EY--RPP-SRkTQPVLYRYTTYIGEE----HPN-SRKVVLSVLTADL-GL-NEAQLHKLRLLARTRYDHT--------TD 217 Eremothecium gossypii
Q6CQD0  156 EY--KRP-STkTHPVAYRYTTYLGEE----HPN-SRKVVLSVKTSDL-GL-EQRELHKLRLLAKTRYDST--------TD 217 Kluyveromyces lactis
Q03976  171 EY--KRP-SPeSHPVTYRYTSYVGEE----HPN-SRKVVLSVKTKEL-GL-EEKSLHKFRILARSRYDHT--------TD 232 Saccharomyces cerevi...
Q6FVM5  158 EY--KPP-SA-SDVVTYKYFTYVGEE----HPN-SRKVVLSLKTESL-GL-EPRALHKFRVLARTRYDHE--------TD 218 [Candida] glabrata
Q5KKI5   92 KF--TPP----TAPIRLTSTIDLARP----DSRyHTKCVLLVPIAAL-PLsTPEAVHRFKLLAGPRWTPGkpgrnefiKD 160 Cryptococcus neoformans

5MRC_YY 187 --------IFKMSSDKFEHASQNARYLHDILQRLLAESKDL-TeDDFSDVPLDTRHTIAKSLRKkkr----dyEFPEHWK 253
Q09705  165 --------LVRISSDKYSSALQNKYHLIKILTSLIEESKRN-A-EKFSHVPLNTGHWKYKKCDK---------RMPQEWL 225 Schizosaccharomyces ...
Q6C9T8  308 --------QCKFASKRHPSAPENKHYLLTQILKLKTEAEQ--G-DSFEDVPLDTRHARNKAERIakrdryrlaKFPEEWN 376 Yarrowia lipolytica
Q6BHR9  215 --------SIKFSSNQHAEATQNARHLVSIFNRLLEASKDL-S-DDFSDIPVDTRHMHAKKAAP---------SFPESWK 275 Debaryomyces hansenii
Q5AI30  213 --------TFQLKSERYPEAAQNVNWLVDTFNKLLTEAKDLsK-DDYSDIPLSKSHMKILAKKAv-------pSFPEHWK 276 Candida albicans
Q750S9  218 --------ILKMSSDRYEHAAQNARYLADKLQALINEASDL-T-DDFSDVPLDTRHTEARLARKnkk----ipEFPESWK 283 Eremothecium gossypii
Q6CQD0  218 --------TLRMSSDRYEEPAQNAKYLNSILLELLKEAKDL-K-DDFADVPLDKRHIIARQLRKkkr----gyEFPEEWK 283 Kluyveromyces lactis
Q03976  233 --------IFKMSSDKFEHASQNARYLHDILQRLLAESKDLtE-DDFSDVPLDTRHTIAKSLRKkkr----dyEFPEHWK 299 Saccharomyces cerevi...
Q6FVM5  219 --------LFKMSSDKFPEAQQNAKYLGDILKRLLQEAKDLsK-DDFSDIPLDTRHTIAKNLRKkhsrrlrtiEFPEEWK 289 [Candida] glabrata
Q5KKI5  161 ensdgengWIKVSEERFESARQNRRSASDILERLVNAANDReS-PLPADLPIDTRHLLARHRKKrsr----qnTF--KWA 233 Cryptococcus neoformans
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