2HN2,2IUB


Conserved Protein Domain Family
TmCorA-like

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cd12822: TmCorA-like 
Click on image for an interactive view with Cn3D
Thermotoga maritima CorA-like family
This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.
Statistics
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PSSM-Id: 213356
Aligned: 102 rows
Threshold Bit Score: 175.45
Created: 20-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 82 residues -Click on image for an interactive view with Cn3D
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Structure:2HN2: Thermotoga maritime CorA forms a homopentamer in which each monomer contacts two other monomers, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                               #  ##         # #                                     
2HN2_A     64 WINITgihrtdvVQRVGEFf--gIHPLVLEDIlnv-hqrPKVEFFenYVFIVLKmftydknlheleseQVSLILtknCVL 140 Thermotoga maritima
EDU36234   25 WIVVHsq----dLNVLKDKl--nLKEENIKECeny-tqgAQINFYkdYIFIILNllqydk---avetnEINIFLskdYII 94  Clostridium sporog...
EDK33580   25 WIILSid----eIDRLDNFi--sVDRETINECksf-sqvPKISFFdgYIFLICNvlnyve--eiviakELNVFLsrnYII 95  Clostridium kluyve...
EES90918   25 WILANke----eLNNIQNKi--vFEDQNLDFNnvqdnstSKIVFFdgYMFLRLNilayrn--eiiksrELDIYLgkdYIV 96  Clostridium botuli...
EDT77924   24 WILMEe-----dEVNLLEKm--fSYECINECIdyk--qeQRIDCFkdYTFILINiieqve--kqiiskELDIFLgksFIV 92  Clostridium perfri...
ADY73669   38 WIHLRgid-eqvENFLLKNf--kINELSLEDCrse--grSKVEVFedYVFVLMIyfdgg----isrqkKLCIFWgkdFII 108 Desulfurobacterium...
Q58439     30 WIDCYdpk-deeLYKLSKKigisVSDLQIGLDeq---eiPRVEEDedFYLIIYKaplfee---ditttSLGIYIknnLLL 102 Methanocaldococcus...
ABO34790   28 WIDCYdps-dveLIELSKTmgieIDELSLGLDeq---evPRVEEEdnYYTIIFKaplfee---ditttSFGIYVkdnIIL 100 Methanococcus mari...
ADL51417   24 WIILNei---eaMERKREFk---IDQCYCEEAmqg-fqpSKITFFdgFIFISINlldyke--sqlntlELDLILtkeNVL 94  Clostridium cellul...
BAK80833   24 WFILSen----eISSIPFEl--dMECIFDSNSar---gfSQINFYneYTFIALDvlefnn--dilsfeDLNIFFgknYII 92  Candidatus Arthrom...
Feature 1                    #   #               #  #       #  #   #     ##  #           ##  #
2HN2_A    141 MFQEKIg----DVFDPVRERirynrg-iirkkRADYLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVlerpekeTVQRTH 215 Thermotoga maritima
EDU36234   95 TVYKEKlnlieEILDDIKECkncfl--ikenpKPFILLYYIIDRIIIKNYEVIATLETKADKIEIDIleeprheHIDEII 172 Clostridium sporog...
EDK33580   96 TVYKDRidildILIKDINDSkncfv--lkdnpKVCILLYYILDRIVVRNHDIISELEVEADRIEISIlknprheQIDNLI 173 Clostridium kluyve...
EES90918   97 TIYNNKitvirELIEDIANLkncfi--lkknpKPAMVLYYILDRIIVKNYEIMGIIEEKADKIEMEIlekpsrhHADDLI 174 Clostridium botuli...
EDT77924   93 TVYKSNisllyDLIEDIKEEkncql--fkldkSPSIILYYILDRIIINNYNIISDLETEGDKIELEIlkdpeskHLNSLL 170 Clostridium perfri...
ADY73669  109 TIGSRRlfeetRKNLSLEERpf--------eqGVERIFWLISSIVADKFKGVTDILEEQADEIEARVfkeqnpeLLEDIS 180 Desulfurobacterium...
Q58439    103 TIHSDKi----KAIGRLHKListkkprivferGIGFLLYHILNEITRSYSRILMNLEDELEELEDKLlagydreVMEKIL 178 Methanocaldococcus...
ABO34790  101 TIHADKiksigRLYNLVKTKkpkt----lldkGKGFFIYTILNQITISYSRILVNLEDQLDVLEDRIvqeqnknMTEEIL 176 Methanococcus mari...
ADL51417   95 MIPKKNmllinTFIDEVIKCsyll----kkeaKCDILVYYILDRIIVNNYTVISNIEVETDRVEISIlkgpkrkHIDELI 170 Clostridium cellul...
BAK80833   93 TVHKSKldvidELILDLRENkncfv--vknnpKISTLLYMIIDRVILKNYSTISSISSKCDKIEISIlkedsrrNFEELV 170 Candidatus Arthrom...
Feature 1       ##  #   #                         ## ##  ## ##  ## ## ###  ######## ##########
2HN2_A    216 QLKRNLVELRKTIWPLREVLSSLYRDvppliekeTVPYFRDVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNEVMK 295 Thermotoga maritima
EDU36234  173 YLRRQVYRIRKYITPLRYIGDSLISNdngmiekeCVKYCITLNNKIEKLMVALETLVQDLSLVREAFESEISNKTNELMK 252 Clostridium sporog...
EDK33580  174 TLRRQVYKIRKYLSPLIYIGDSLVINdnlvidkeSMKYFINLNKKIEKLMSSLESLVQDLALVREAFESEISNKTNELMK 253 Clostridium kluyve...
EES90918  175 HLRRQLYRIRKFLNPMRYIGDSLVSNdnsiieekDIKYFKNINIKINKLMNNLESLVQNLALVREAFESEISNKTNEFMK 254 Clostridium botuli...
EDT77924  171 FIRREAYKLRKLIKPIRYIGDTLVIDenevigegNKVYFKNINSKIEKLITSLDTLSQELAIVREAYESELANKTNELMK 250 Clostridium perfri...
ADY73669  181 DLSFEILTLRRTLKQLRDTYKSLISSvsrfinpeNIHYFRDLLDEISILYDRAETLHEFTQNVLSVFSSLVSFKLNDIMK 260 Desulfurobacterium...
Q58439    179 GLRKTLVYFHKSLIANRDVLVLLKRKylpittkeDRENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIMK 258 Methanocaldococcus...
ABO34790  177 QLRKMLVYFHKALISNKDVISVLKRKyisittqeDRWEFEDLYYDILQLIDMETTYRELLSSMMDMSLSIENIRMNQVMK 256 Methanococcus mari...
ADL51417  171 RLRRVVFKIRKYINPLRYIGDALVSNdnkvinteNAKYFEGLESKIDKLIQALESLVSDIGQVREAFEAETANKTNELMK 250 Clostridium cellul...
BAK80833  171 RLRGQVYRVKKYLYPLRYIGDSLILNengiidgnDIILFERINEKFQKLMGAIESLNQQLSLVREAYESELSNKTNQLMK 250 Candidatus Arthrom...
Feature 1     ### ### ###### ########          ##  ##  #          #  #   
2HN2_A    296 VLTIIATIFMPLTFIAGIYGMNFEyMPELRWKWGYPVVLAVMgviAVIMVVYFKKKKWL 354 Thermotoga maritima
EDU36234  253 VFTLIATIFLPASLITSIYGMNFDnLPPMQNPYGCLYVLGFTliiSLFLVYLFKRKKWL 311 Clostridium sporogenes ATCC 15579
EDK33580  254 IFTVIATIFLPLNLISSMYGMNLKgIPFVERDNGCHYVILIMvvvAITLICVFKRKKWL 312 Clostridium kluyveri DSM 555
EES90918  255 VFTIITSIFLPLELISGVQGMNFKnMPFSKSIYGYYYTILLMiivTCILIIVFKIKKWL 313 Clostridium botulinum D str. 1873
EDT77924  251 VFTIITAVFLPLELITAIFSMSFEsMPFKTCPYGFYILVFILslmALILLLIFKIRKFL 309 Clostridium perfringens NCTC 8239
ADY73669  261 TLTILITILEPLMLISSFYGMNIEeLPFAHSPYGIFVISFLMigiSFFLLYYFRRKGWI 319 Desulfurobacterium thermolithotrophum D...
Q58439    259 ILTMVTTIFAVPMWITGIYGMNFSyLPLANNPQGFWLVMALMvviIMIFVYIFRRSGWI 317 Methanocaldococcus jannaschii DSM 2661
ABO34790  257 ILTMVTALFAVPMWITGIYGMNFKyMPLSEHPYGFWIISAISivvIMIIIHTFVKEKWI 315 Methanococcus maripaludis C5
ADL51417  251 AFSLITGIFFPVSIITSIFGMDVKnMPLADNDYAFYIIFAIMiisSGILIYFFKKKRWL 309 Clostridium cellulovorans 743B
BAK80833  251 VFTLVASIFLPLDLLTSFFGMSFEiMPLRHSCYSIHIVIFVMiiiVCLLIILFKKKDWL 309 Candidatus Arthromitus sp. SFB-rat-Yit

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