Conserved Protein Domain Family
PBP2_BztA

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cd13692: PBP2_BztA 
Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold
BztA is the periplamic-binding protein component of ABC transporter specific for carboxylic amino acids, glutamine and asparagine. The BZtA domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.
Statistics
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PSSM-Id: 270410
Aligned: 31 rows
Threshold Bit Score: 272.583
Created: 10-Jun-2009
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:
  • Comment:based on sequence similarity to the glutamate/cysteine/aspartate binding proteins.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #      #                                             #            
Q52663        25 LDDVKARGQLICGSNp----GLTGFAAPDa-nGVYQGFDVAVCKAVAAavlGDPMKVKYVPLt-GETRFTALASGEVDVL 98   Rhodobacter ca...
EDY67295      56 LRSAKVRGAVRVAVSq----GVRGLSLRTp-aGRWTGLDTDIARAVAAaalEDAEAIDWVPVr-ATDRLRTLESGRADLT 129  Streptomyces p...
ZP_01621705  297 LQEVLDRGFVRVGVRn----DAQGLGFAEe-nGNLTGFDVDLGRALAAslfGDPNAVEFVIQttGSQRFSDVANGVVDVT 371  Lyngbya sp. PC...
EFA70065    8308 TTSANPDNLLAEIQQr----GYIRFSGGRs-dSISGVFDYQFVRAIAAaifGDANRVDQVPGt-FSESFSQVANKQVDLS 8381 Cylindrospermo...
YP_724182   2537 LNSVANPETTILDDI-----IKRGQIKVAi-sGSGNEFDLEFAEVIAAavfGDASKVKSITSk-FSKSFELVADGKADLA 2609 Trichodesmium ...
EFA70065    8646 LAEIQNRGFIKYGLPqitgsGFPGFAEIDs-qGQYKGFDVDLSKAIAAavfGDPSKVEYTQQa-FANSFANTANGLVDVS 8723 Cylindrospermo...
ACU35975      11 VSAIRRRGHLRLGVSt----GIRGLSWTDd-aGVRRGLDVDTGRAVAAalfGEPGRIEYTEId-PEDRIRAVTSDAVDLL 84   Actinosynnema ...
ADV11717      30 LEAVKARGVLNCTGHd---gSYLGFAEVDd-kGNWKGMDIDLCRAVATavlGDPAKLKVVPIs-WAQRWPSLQSGDVDII 104  Mesorhizobium ...
BAK13115       7 IKRIEQHDVLNVGVSl----GFKGLSQRDplnNSWNGFDIDLARAVAIsvlGDGGKIHFIPLq-SADRFQALRDGVIDLG 81   Pantoea ananat...
ADV82513      23 LQKVRAAGVLTCGVIa----EDAEYNTEDd-hGSRGGFDLDLCKAVAVaalGEKAQTKVITFldDKSGVDALIAGKIDLI 97   Acidobacterium...
Feature 1          #      #                                                ##                    
Q52663        99 VRNstWTFSRDTelaLDFVA--VNYYDGQGFMVNkslgv---ssakELDGATICVQtGTTTEMNLADFfkannmtyTPVN 173  Rhodobacter ca...
EDY67295     130 VCNltWTMGREAtgaVLFAG--ITCYDGEGFLVRaadgl---adpaDLAGRRLAVHnGCTTVVNLESWygplglevEPVG 204  Streptomyces p...
ZP_01621705  372 SRNatHNLRRDAllgVDFAP--INTYDAQFVVTPtasgi---ttleQLAGGRIGVSaGTTSETRLQEKlsaaginaEVVA 446  Lyngbya sp. PC...
EFA70065    8382 TRHitQNLVRDGelnVDFGP--VYYYDFLSVLVRnksgi---qgakDLNGKKIGVVkNTTALTNLDNLldsigvqfTAEV 8456 Cylindrospermo...
YP_724182   2610 AQRitATLGRDGelnVDFAP--TYLFDYQTVIVPndsdi---tnvsHLNEQTIGVIeGTTALINLQNQlevegikfTPKL 2684 Trichodesmium ...
EFA70065    8724 AAGytGNLMRDAglgVDYSP--VYIHTGQGILTRkdsgi---tgiaTLNGSTIGALtTVTAIENLSDLtkkfgstiIITP 8798 Cylindrospermo...
ACU35975      85 ACNatWTFSRECdanVAFVL--TTCYDEGAILVRrdsgi---asadDLDGHTLGMCeGTSSEEALRAWfgprgravHCKH 159  Actinosynnema ...
ADV11717     105 IKAsgGTLSRDTelgLQFSM--SYYLGTTKVMAHkelnl---kslkDAAGGTICIPaGTSQEQQVAAYtaklgiklEPVL 179  Mesorhizobium ...
BAK13115      82 TFNasVTFQREAeygINFLH--PMLFDGEVLMTPrsnlteetpqarFTRQRRIAAMrGSTTEENLTRYfdelnlpcEILL 159  Pantoea ananat...
ADV82513      98 ATLs-ADFSHTTn--ASLGEsaPVLYDGVGFLVLrksgi---ahaaDLTHRKVCFLaETNVETALQAWftrqhldlLPFP 171  Acidobacterium...
Feature 1                            ##                                  #                       
Q52663       174 IaDDAEGQQKFAAGACDSYTTDa----sGLASSRAtlp--naaDIVILpeiisKEPLGPVVRHGDnNWGDIVRWSFYALv 247  Rhodobacter ca...
EDY67295     205 FdDPADALAAYACGDCAAYVLDr----tALAGARAclp--rpqDHRILpvsisREPMAAAVHEADpHWFRLVRWVLQLLv 278  Streptomyces p...
ZP_01621705  447 LdNFQTIFDSYINGELDAITGDg----gLIISSLLtlpveqrsQHQPFpevlgEEPLAMVVDENQsQWKDVVSGVTYAVt 522  Lyngbya sp. PC...
EFA70065    8457 FdTQNDLYAAYNLGEVDAIASDkgiiydALEREILen----kqEHRFLdiqfsKEPIGLVIPENEsEWGDVVRWVVYTTi 8532 Cylindrospermo...
YP_724182   2685 FeTAEEMIAAYDAGEVDAYSHDr----sLILENLDqls--qpeNHRLLdvelsKEPISLALPENDsQWADVVRWAGYVPi 2758 Trichodesmium ...
EFA70065    8799 FdDKNKMYAAYEKGEIDAVYNDk----tLLAGIIPtls--dpqAHEILpetfsKEPLTLILDENQsDWADVVRWVMNSLv 8872 Cylindrospermo...
ACU35975     160 YaSPAAALAAYASGEVTGYVADg----vVVAGERTrla--tpsDHVVLpervsVEPMGPVVKDDDpQWVKTARWVFFALi 233  Actinosynnema ...
ADV11717     180 IeKTEELEQAYFSGRCDLYAQWg----pTLAIARIaks--kvdDHVILpdvlaVEPEVMIMRQGDdNWVDIANWTLSTLi 253  Mesorhizobium ...
BAK13115     160 FdSPQQARQAYESGECDIYCLDg----yLLAGEHHqlt--dssQHLILddrisLEAMAPAVSASDsQWYIATKWVMRALi 233  Pantoea ananat...
ADV82513     172 FqEEGEMEAAYITKNCAAIAGDl----tRLAQTRAsfet-qapDHMILpeviaADPLAFAYRSSDpQWGRIVDWTAQVLf 246  Acidobacterium...
Feature 1                     
Q52663       248 AAEEYGITKANLE 260  Rhodobacter capsulatus
EDY67295     279 AAEHEGPEAAARL 291  Streptomyces pristinaespiralis ATCC 25486
ZP_01621705  523 EALELGLTSENVT 535  Lyngbya sp. PCC 8106
EFA70065    8533 QAEEYGINSQNID 8545 Cylindrospermopsis raciborskii CS-505
YP_724182   2759 QAEEFGISSQNIA 2771 Trichodesmium erythraeum IMS101
EFA70065    8873 QAEEYGITSTNID 8885 Cylindrospermopsis raciborskii CS-505
ACU35975     234 AAEAAGVTSHQVR 246  Actinosynnema mirum DSM 43827
ADV11717     254 FAEQEGITSKNVD 266  Mesorhizobium ciceri biovar biserrulae WSM1271
BAK13115     234 EAENLGITQKNIL 246  Pantoea ananatis AJ13355
ADV82513     247 HGEALGVTSANID 259  Acidobacterium sp. SP1PR4

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