Conserved Protein Domain Family
PHA03311

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PHA03311: PHA03311 
helicase-primase subunit BBLF4; Provisional
Statistics
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PSSM-Id: 223040
Aligned: 43 rows
Threshold Bit Score: 1156.97
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
52139276    5 ASSSTPRPTPKYDDALILNLSSAAKIERIVDKVKSLSRERFAPedFSFQWFRSISRVertTDNNPsaattaaatatvhss 84  
139424510   1 -MAEEPRAPEALSSTFMLNMTSDASVRRIVRRIGTLAKRRVQq-lPDMETFSPEFDP---EISEP--------------- 60  
83642879   38 DWLVGWTAMEHIPKSFILNMTSEAKVRSIVQKIRTLSERTTSSp-PDISWFDTEFDP----DELG--------------- 97  
82503237    1 -MAEEPRAPEALSSTFMLNMTSDASVRRIVRRIGTLARRRVQq-lPDMETFSPEFDP---ELSEP--------------- 60  
51518050    1 -MAEEPRASGTLSSTFMLNMTSDASVRRIVKRIGTLARRRTRq-lPDMEAFSPEFDP---ELSEP--------------- 60  
10140965    1 --------MEHIPKSFILNMTSEAKVRMIVQKIKALSEETTSDs-PDISWFDAEFDP----DDLG--------------- 52  
13095621    2 EDEVGCTVMEEPSVGFILNMTSDAKVRSILEKVKLLSEKTTEP--PEMNWYDAEFDP---SECPG--------------- 61  
9625999     1 --------MAELSPEFILNMTSDAKVRIIVEKIRKLSNITTRP--PEMTLYNDQFDP---EQCPG--------------- 52  
9628047     1 --------MEEPGAGFILNMTSDSKVRAIVGRIRGLAAKTVPP--PEMSWFDSQFDP---EDAEG--------------- 52  
9629581     1 ---------MALSDRFIMNMTSDAKIRQIVTRIEDLSNTVTTn-iPDMCWYDSQYDPl--DEECM--------------- 53  
52139276   85 vsssaaaaasseaggtrvpcvdrwPFFPFRALLVTGTAGAGKTSSIQVLAANLDCVITGTTVIAAQNLSAILNrtrsAQV 164 
139424510  61 ------------------------PFLPFSAYVITGTAGAGKSTSVSCLHHTMDCLVTGATTVAAQNLSQTLR----AYC 112 
83642879   98 ------------------------PLLPFSAYCITGTAGAGKSTSIAAIYQNLNCLITGATVVAAQNLSKTLH----TFC 149 
82503237   61 ------------------------PFLPFSAYVITGTAGAGKSTSVSCLHHTMDCLVTGATTVAAQNLSQTLRa----YC 112 
51518050   61 ------------------------PFLPFSAYVVTGTAGAGKSTSVSCLHHTMDCLVTGATTVAAQNLSQTLR----AYC 112 
10140965   53 ------------------------PRLPFSTYCITGTAGAGKSTSIAALHQNLNCLITGATVVAAQNLSKTLH----SFC 104 
13095621   62 ------------------------PFLPFSVYLITGTAGAGKSTSISSLYQSVNCLITGATTVAAQNLSKRLK----TYC 113 
9625999    53 ------------------------TLLPFTCYVITGTAGAGKSTSISALYQNLNCLITGATTVASQNLSRCLK----TYC 104 
9628047    53 ------------------------PFLPFSTFLITGTAGAGKSTSISALYQSLNCLITGATAVAAQNLSNGLK----TYC 104 
9629581    54 ------------------------NLLPFTSFIITGTAGAGKSTSVSAIHQQLNCLITGATVAASQNLSSMLK----SYC 105 
52139276  165 KTIYRVFGFVSKHVPLADSAvshetleryrvCEPHEETTIQRLQINDLLAYWPVIADIVDKCLNMWERKAASASAAAAAA 244 
139424510 113 PTVYSAFGFKSRHINMTQRVs---------sHGRSTDAALEELQRRDMAKYWPVLSDIAAEFRRTKPRGLYSGVSGPAFE 183 
83642879  150 PTIYTAFGFKSRHINLLNRKp---------qIPSQLEPDITTLQYYEISKYWAVIKDIMSEFTKKKKYGLYGSMSERAFS 220 
82503237  113 PTVYSAFGFKSRHINMTQRVs---------sHGRSTDAALEELQRRDLAKYWPVLSDIAAEFRRTKPRGLYSGVSGPAFE 183 
51518050  113 PTVYSAFGFKSRHINMTPRVs---------sHGRSTDASLEELQRRDLAKYWTVLSDIAAEFRRTKPRGLYSGVSGAAFE 183 
10140965  105 PTIYTAFGFKSRHINLLNRKp---------qIKLCGDSDITAVQYYELSKYWPVIKDIIGEFCKKKKFGLYASMSEEAYR 175 
13095621  114 PTIFNAFGFKSRHINILTRS-----------PPRGQWTSIDHLQHYELDKYWPIISDICKEIRKKKKSGQYSNISNAAFN 182 
9625999   105 PTIFNAFGFKSKHINILPRS-----------VPRRTLDTIEQIQNFELCKYWPILTSIIQEFSKKKNLGQYSSISLAAFN 173 
9628047   105 PTIYSAFGFKSRHINILPRH-----------GRNAPARDMEGIQRNELCKYWPVISDILGEFTKKKQRGQYEHLTGAAFG 173 
9629581   106 PTIFQAFGFKSRHINMLCRQ-----------VPKTPITSIEQLQQYELAKYWSVVADIIQEITQKKKMHQYQNMSEELYE 174 
52139276  245 ACEDL--SELCESNIIVIDECGLMLRYMLQVVVFFYYFYNALGDTRLYRERRVPCIICVGSPTQTEALESRYDHYTQNKS 322 
139424510 184 VLRDMhqGQLWTTNVIVVDEAGTLSVHILTAVVFCYWFFNAWLRTPLYRRGRIPCIVCVGSPTQTDAFQSSFSHETQVNK 263 
83642879  221 TLSCLsgPQMWTTNIIVIDEAGTLSSHVLMAIVFLWWFFNGWLNTKQYVQGKMPCVVCVGSPTQTDAYQSLFDHGTQRQR 300 
82503237  184 VLRDMhqGQLWTTNVIVVDEAGTLSVHILTAVVFCYWFFNAWLRTPLYRRGRIPCIVCVGSPTQTDAFQSSFSHETQVNK 263 
51518050  184 ALRDMhqGQLWTTNVIVVDEAGTLSVHILTAVVFCYWFFNAWLHTPLYRSGHVPCIVCVGSPTQTDAFQSSFSHETQVNK 263 
10140965  176 VFGCLgsPQLWTTNIIIIDEAGTLSSHVLMAVVFLWWFFNGWLNTRQYLNGKIPCIVCVGSPTQTDAYHSQFDHSKQQQH 255 
13095621  183 MLCKMgsPSLWTTNVIVIDEAGTLSSHILSTVVFFYWFYNSWLNTPLYRAGKVPCIVCVGSPTQTDAFQSTYNHIQQRHH 262 
9625999   174 MLAKMt-TTLWTTNVIVIDEAGTLSSHILTAVVFCYWFYNSWLNTPLYRSGAVPCIVCVGSPTQTDAFNSTYNHIQQKYN 252 
9628047   174 ALAKMgtPTLWTTNIIVIDEAGTLSSHILTAVVFLYWFYNSWLQTPLYKSGAVPCVVCVGSPTQTDAIQSTYNHSMQKHH 253 
9629581   175 LMCLScqPELWTTNIIIIDEAGTLPSYMLTTIVFFYWFYNSWLSTPLYRQGKVPCIVCVGSPTQTSAIQSIFNHSLQRNE 254 
52139276  323 VRKGVDVLSALIQNEVLINYCDIADNWVMFIHNKRCTDLDFGDLLKYMEFGIPLKEEHVAYVDRFVRPPSSIRNPSYAAE 402 
139424510 264 IRECDNILTFLVGNPRAATYVDVARNWALFINNKRCTDVQFGHLMKTLEYGLELSPDILAYVDRFVVPRAAIMDPTQYVG 343 
83642879  301 VRECDNILSLLIGNNAVSTYVNISENWALFINNKRCTDPEFGHMLKVLEYGLEVSEDVMEYINRLVVPKSKIMDPMQYIG 380 
82503237  264 IRECDNILTFLVGNPRAATYVDVARNWALFINNKRCTDVQFGHLMKTLEYGLELSPDILAYVDRFVVPRAAIMDPAQYVG 343 
51518050  264 IRECDNILTFLVGNPRASAYVDVARNWALFINNKRCTDVQFGHLMKTLEYGLELSPEILAYVDRFVVPRAAIMDPAQYVG 343 
10140965  256 VRECDNVLSLIIGNKTVSDYVKISENWALFINNKRCTDPEFGHMLKVLEYGLEISDDVMEYINRLVVPRSKIMDPMQYVG 335 
13095621  263 ISACDNVLSLLITNKILADYIDLNNNWALFINNKRCTDPEFGHMLKLLEYNLPIPDDTMNYIDRFIVPRSKILNPLEYIG 342 
9625999   253 IMECDNILSFIIGNKVVSEYISLTNNWALFINNKRCTDPEFGHLLKTLEYSLKISPKTMEYIDRFVVPKAQILNPLEFLG 332 
9628047   254 IQECDNILTFLMKHEAVSRYVDLNHNWALFINNKRCTDPEFGHLLKTLEYNLDISPRMVDYIDRFVVPKSKILSPLEYVG 333 
9629581   255 IQKCDNVLSVLMENQVLRRYIDVDNNWALFINNKRCLDTEFSHMLKVMEYGLPVTDEVLQYIDRFVVPYAKICDPLEYVG 334 
52139276  403 MTRLFLSHVEVQAYFKRLHEQIR-------------LSERHRLFDLPVYCVVNNRAYQELCELADPLGDSPQPvelWFRQ 469 
139424510 344 WTRLFLSHAEVKTFLTTLHATLKtagqgraargtggDGGGVTMFTCPVECEVFLEPLAQYKTLVGLPGLTAHT---WLQK 420 
83642879  381 WTRLFLSHAEVKQYLSALHCALSaq----------qGDSACTLFTCPIVCEIFHGAVDEYKDAVHLPNLSPLE---WLTR 447 
82503237  344 WTRLFLSHAEVKTFLTTLHATLKtagqgraargtggDGGGVTMFTCPVECEVFLDPLAQYKTLVGLPGLTAHT---WLQK 420 
51518050  344 WTRLFLSHAEVKTFLTTLHATLKtatrgragggtggADGGVTMFTCPVECEVFLEPLAQYKTLVGLPSLTAHT---WLQK 420 
10140965  336 WTRLFLSHSEVKQYLGSLHSALSsn----------qSSTTCTLFTCPIVCEVFHDAVEEYKEAVNVPSLTPLE---WLAR 402 
13095621  343 WTRLFLSHNEVKAYLSSLHTALAaa----------tNTTGAKLFTCPIVCEIFTGAFQKYKSHVNLDTLTPTE---WLNK 409 
9625999   333 WTRLFLSHAEVKSYLSSLHTALVtg----------tNVSGAKLFTCPIVCEVFTKAFNEYKSHVNLPSLTATE---WLSK 399 
9628047   334 WTRLFVSHREVKAYLTALHETLSlnqg------gatAEADARLFTCPVVCEVFTDTFNEYREAVNLPGLTVTE---WLQK 404 
9629581   335 WTRLFVSHQEVKTFLSSLHLALTaks--------hrLPNEVKLFTCPIVCEVYNQTFQKYKEKVNLTEITIMD---WLKK 403 
52139276  470 NLARIINYSQFVDHNLSSEITKEALrpaadvvatnnpsvqahggggsvigstggndetaffqdddtttapdsRETLLTLR 549 
139424510 421 NYARLGNYSQFADQDMVPVGTEQDE-----------------------------------------------ERVKVTYN 453 
83642879  448 NTYRLSNYSQFVDQDMTTVCTEVGE-----------------------------------------------TSTKVTFA 480 
82503237  421 NYARLGNYSQFADQDMVPVGTEQDE-----------------------------------------------ERVKVTYN 453 
51518050  421 NYARLGNYSQFADQDMVPVGTEQDE-----------------------------------------------ERVKVTYN 453 
10140965  403 NTYRLSNYSQFIDQDMTTVSTDVGE-----------------------------------------------ASTKVTYA 435 
13095621  410 NLFRLSNYSQFIDQDMTIVSTETSE-----------------------------------------------DSLKITYV 442 
9625999   400 NLHRLSNYSQFIDQDMTAIHTETTD-----------------------------------------------TSTKVTYL 432 
9628047   405 NLCRLSNYSQFIDQDLSAVHIETGE-----------------------------------------------ESTKVTYL 437 
9629581   404 NMFKASNYSQFVDQDMTIINTDITE-----------------------------------------------DCTRITYQ 436 
52139276  550 ITYIKGSSVGVNSKVRACVIGYQGTVERFVDILQKDTFIERTPCEQAAYAYSLVSGLLFSAMYYFYVsp---ytTEEMLR 626 
139424510 454 VTYVKHSSVSVNCKTKKSICGYTGTFGDFMDTLEADSFVEAHGHEQPEYVYSFLARLIYGGIYAFSHgghslceNGEYVA 533 
83642879  481 TKFVKGSYVSVNGKTKKCFLGFIGTYSQFRKLLDSESFLDTHGHEQPEHAYVFLSNLLYNAMYTFYHaav-qasCQAYLD 559 
82503237  454 VTYVKHSSVSVNCKTKKSICGYTGTFGDFMDTLEADSFVEAHGHEQPEYVYSFLARLIYGGIYAFSHgghslceNGEYVA 533 
51518050  454 VTYVKHSSVSVNCKTKKSVCGYTGTFGDFMDTLEADSFVEAHGHEQPEYVYSFLARLIYGGVYAFSHgghslckNEGYAA 533 
10140965  436 TKFVKGSYVSVNGKTKKCFMGFMGTYAQFKRVLDSESFLDTHGHEQPEHAYAFLCQLLYNSMYNFYQaav-qsdCASYIS 514 
13095621  443 TKYVTDSYVSLNGKTKKSTCGFMGPYESFKKVLECETFIDTHAHDQPEFVYSFLNILLYNGMYSFYNqgv-kekNIDYLS 521 
9625999   433 TKYVKNTYISLNGKTKKCVCGYVGTYKNFKKILESESFIDSHANDQPEFVYSFLCTILYNSLYNFHNygv-tekNESYLN 511 
9628047   438 VKYVKNSYVSLNGKTKKCICGFMGTFEKFKTILDNETFIDAHSHDQPEYVYSFLNTLLYNGMYAFHKhgl-dagDEGYLD 516 
9629581   437 AKYVKNSFISLNGKTKRCICGYSGTYASFKQVLDSDGFLESHTRDNIKYVYNFLSTLIFNSLYQFYAygi-qtgDKKYLA 515 
52139276  627 ELARVELPDVSSLCAAAAATAAAPAWSggenpinnhvdadssqggqsvpvsqrmehgqeethdipclsnhhddsdaitda 706 
139424510 534 ELGAVPLPGRTWDPEVTAGMElgelpleva-------------------------------------------------- 563 
83642879  560 ALSTSPIPSVLCKSnvevnsled--------------------------------------------------------- 582 
82503237  534 ELGAVPLPGRTWDPEVTAGMElgelpleva-------------------------------------------------- 563 
51518050  534 ALGAVPLPGRTWEPEVTAGLQpgelpleva-------------------------------------------------- 563 
10140965  515 ALNNIPIPEVLCapahselac----------------------------------------------------------- 535 
13095621  522 KLNQIPIPSNISTPGTTKSDYISDSPEeni-------------------------------------------------- 551 
9625999   512 DLANLKLPENLTHLYTQTDLDIEREALml--------------------------------------------------- 540 
9628047   517 ALRRLPIPPNITHLSTfqdaldqte------------------------------------------------------- 541 
9629581   516 SIQEQNIPSLLLsddetv-------------------------------------------------------------- 533 
52139276  707 elmdhtslyaDPFFLKYVKPPSLALLSFEETVHMYTTFRDIFLKRYQLMQRLTGGRFATLPLVTYNrRNVVFKANCQISS 786 
139424510 564 --wdgerspaAVFYARVLAPPAANSAPLCSLLNIYNDLRAYFRQCLDVAVRYGRREFRDLPFCTFT-NNMLIRDNIEFTS 640 
83642879  583 --ldtlsateDMFYHKTLPPPTVKSTSLANIIAVYSSLKDVFYARLGAAEQHLSPSFPDTTFSTFL-CNTIVKNYVDYVS 659 
82503237  564 --wdgerspaAVFYARVLAPPAANSAPLCSLLNIYNDLRAYFRQCLDVAVRYGGREFRDLPFCTFT-NNMLIRDNIEFTS 640 
51518050  564 --wdgerspaAAFYASVLAPPAANSAPLSSLLNIYNDLKAYFRQCLDVAVRYGGREFRDLPFCTFT-NNMLIRDNIEFTS 640 
10140965  536 --seplnegeDLFYHKTLPPPTARSTSLANIIAIYQGLKDIFIARMEAATRYQMPNFGYSSFNTFL-SNTIVKNNVDFVS 612 
13095621  552 --------eeDRFYYMVQPPPTANAAPLPVLIGYYNALKEIFLLRLSLAIESFGTSFLQKNFVTFT-INICIRDGVELTS 622 
9625999   541 --------edDVFYHMVSPPPTASSASLPCLISWYTALKDIFISRLKLATTWFSNKFLDREFTSFT-INMLVRDNIEFTS 611 
9628047   542 --aallnpesDIFYHMTCAPPSASSASLSTLISFYMSLKSVFLQRLALAVSRFGRDFAERTFQTFT-INMMIQNGVDFTS 618 
9629581   534 -----eglteDIFYLLATQPPLPSQSTITEIINWYSAIKQVYLDRLQVATDHFGEEFLLQPFSTYT-TNIHIRDDVEFTS 607 
52139276  787 QTGSFVGMLSHVSPAQTYTLEGYTSDNVLSLPSDRHRiHPEVVQRGLSRLVLRDALGFLFVLDVNVSRFVESAQ-GKSLH 865 
139424510 641 DEPLLHGLLDYASTTENYTLLGYTHLNVFFGIRGKQQ-PQDAGSSRMPRLMVKDEAGFVCCLEHNTNKLYETIE-DKSLN 718 
83642879  660 AEPV-HGLLDYASTVESYRLQGYTFSPIYFGKAFLQNtLSKDLQDKLPHLVVQDSDGFICCLENNITKMTEILEgGSQIH 738 
82503237  641 DEPLLHGLLDYASTTENYTLLGYTHLNVFFGIRGKQQ-PQDAGSSRMPRLMVKDEAGFVCCLEHNTNKLYETIE-DKSLN 718 
51518050  641 DEPRLHGLLDYASTTENYTLLGYTHLNVFFGLRGGQQ-PQEPGGSRMPRLMVKDEAGFVCCLEHNTNKLYETIE-DKSLN 718 
10140965  613 AEPI-SGLLDYASTVESYMLQGYTFSPIYFGKLPLQStLSKDLRDKLPNLVVRDADGFICCLDNNLTKMTENLEsGAQIH 691 
13095621  623 DATHIFGLLDYASTVESYKLKGYTFLPVNFGRYAGVE-LSKDLKNKMPNIVVEDSLGFISCLENNVNKLTETLEdGSVFH 701 
9625999   612 TNGRLHGLLEYASTVESYKLQGYTFLPVNFGRSQTTv-ISKDLQDKMPSIVVQDSSGFIACLEKNVNKMLETLDdGKSFH 690 
9628047   619 ASERLFGLLGYASNVDTYKLKGYTFIPVGFGRFNQAE-LSRDLRDKMPVVVVEDPHGFIACLENNVNKMTEVMEnGDLIH 697 
9629581   608 TETVITGLLDYASTVESYQLKGYTFVSVSFGKQFSQR--SDYMSKTMPMIIVQDSMGFISCLNTNFNKITEILEdGSSMV 685 
52139276  866 VCTTVDYGLTSRTAMTIAKSQGLSLEKVAVDFGDHpKNLKMSHIYVAMSRVTDPEHLMMNVNPLRLPYEK--NT-AITPY 942 
139424510 719 LCSIRDYGISSKLAMTIAKAQGLSLNKVAICFGSH-RNIKPGHVYVALSRARHSNCVVMDRNPLSEMITG--EGnPASGY 795 
83642879  739 MCSVGDYGISSKLAMTIAKAQGLSLDKVAVCFGNH-SKIKRSHVYVALSRATDANHLVIDSNPLSSKDCEmdIC-ESSKH 816 
82503237  719 LCSIRDYGISSKLAMTIAKAQGLSLNKVAICFGSH-RNIKPGHVYVALSRARHSNCVVMDRNPLSEMITG--EGnPASGY 795 
51518050  719 LCGIRDYGISSKLAMTIAKAQGLSLNKVAICFGNH-RNIKPGHVYVALSRARHSNCVVMDRNPLSEMTTG--EGnPASGY 795 
10140965  692 MCSVGDYGISSKLAMTIAKAQGLSLDKVAVCFGNH-QKIKRSHVYVALSRATDANNLVIDSNPLSNRECEm-DIcKSSKH 769 
13095621  702 LCSAGDYGLSSKLAMTIVKAQGISLDKVAISFGNH-KNIKLSHVYVAISRATDPECLVIDCNPLKHIPPS--TDqNSSSH 778 
9625999   691 LCSAGDYGISSKLAMTIVKAQGTSLDKVAICFSNH-KKIKVSHIYVAISRATNPNHIVMDCNPLKLLVND--TQsISSQH 767 
9628047   698 ICTAGDYGISSKLAMTIAKAQGMSLSRVAVCFGNS-KFVRKSHVYVAISRATDPRHMVIDCNPLKNLEEDreDN-KTSKY 775 
9629581   686 LGCTGDYGISSKLAMTIVKAQGMSLSKVAVAFGKY-KTLQHSHAYVAISRATNPKYLVIDRNPMRSSELT--MDtKSAGY 762 
52139276  943 ICRALKDKRTTLIF 956 
139424510 796 IVDALKNSRALLVY 809 
83642879  817 IVAALCNPKTLLVY 830 
82503237  796 IVDALKNSRALLVY 809 
51518050  796 IVDALKNSSALLVY 809 
10140965  770 IVAALCNPQTLLIY 783 
13095621  779 IVKALHNPKTLLVY 792 
9625999   768 IIKALNNPNTLLVY 781 
9628047   776 IVQALNNPDTILVY 789 
9629581   763 ITKALHNPKTLLVY 776 
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