2YRF,4LDQ


Conserved Protein Domain Family
salvage_mtnA

?
TIGR00512: salvage_mtnA 
Click on image for an interactive view with Cn3D
S-methyl-5-thioribose-1-phosphate isomerase
The delineation of this family was based in part on a discussion and neighbor-joining phylogenetic study, by Kyrpides and Woese, of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. This clade is now recognized to include the methionine salvage pathway enzyme MtnA. [Amino acid biosynthesis, Aspartate family]
Statistics
?
PSSM-Id: 273112
Aligned: 23 rows
Threshold Bit Score: 432.061
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2YRF_A        30 RSVEWK--ET----AITILNQQKLPDETEYLELTTKEDVFDAIVTLKVRGAPAIGITAAFGLALAAKDIetdNVTEFRRR 103 Bacillus subtilis
Q885T7        12 KAIDWR--DD----ALYLLDQRVLPFEEVWHRYTTAAGVAEAIRTMVVRGAPAIGISAAYGAVLGARARi-aEGGDWYPA 84  Pseudomonas syr...
WP_011320260   3 YPVIWQ--NN----CVLLIDQTRLPNEYAVVEIHRSEEMARAIQTMIVRGAPAIGVAAAYGMYLGAREIetsERQEFLQK 76  Anabaena variab...
WP_011025825   5 KTMEFR--DG----VLYLIDQRKLPLSYEFFECRTYQDVDFAIKDMVVRGAPAIGAAAAYGVVLAAQQFmkeEKENFLKN 78  Caldanaerobacte...
WP_023908110  16 RPILWT--GH----FLKLLDQRKLPFVVEYVECHSSEDVTQAIRALIVRGAPAIGIVAGWGAVLAAREIeavDGIEALRK 89  Xylella fastidiosa
WP_017272511   9 HTIWLN--EDg--rSVDIIDQRWLPHDLRVVTLKTVADVALAIRDMWVRGAPLIGVTAAYGVAIAMTKDps------dAH 78  Sinorhizobium m...
WP_002808874   9 RAVAWT--GA----GVRLLDQRRLPQEEIYWTIACVSDVAQAITKMVVRGAPAIGIAAAYGVVLAARARfseAGSGWKQL 82  Nitrosococcus o...
WP_011568571   9 RSLWWNseNH----VLEIIDQRWLPHEFRVIPVATMQDFADAIYQMRVRGAPLIGATAAYGMALAMAED------ASDAN 78  Roseobacter den...
WP_011373585   6 KALWLN--DDlfdeCLEVIDQRLLPFIYDTRHLTTTEEVVTAIKNMTVRGAGVIGSVAAFGIYIAAME-----VEGDYEL 78  Sulfurimonas de...
WP_010961219  13 QALKWS--DG----GLEVLDQRLLPGDVVYQIFDTAAGVAEAIASMRVRGAPAIGIAAAYGVVLGARAAyarDPAHWKRA 86  Methylococcus c...
2YRF_A       104 LEDIKQYLNSSRPTAINLSWALERL-SHSVENaIS--VNEAKTNLVHEAIQIQVEDEETCRLIGQNALQLFKKGD----- 175 Bacillus subtilis
Q885T7        85 LEEDMQLLADSRPTAVNLFWALNRI-RDRLMRvKN--GDNPLAALEAEAVAIHLSDREANLTMAQLGADLIRKHQgn--- 158 Pseudomonas syr...
WP_011320260  77 LEKVAQLLRATRPTAVNLFWAISRMlKTAYETlGT--VAQIKENLLQTAQAINAEDLQTCQVIGDNGLAILPKTpt---- 150 Anabaena variab...
WP_011025825  79 MENALNVLSKSRPTAVNLTWAIGRM-RGVLEKvKDlsVSDIYEALKEEANKIYFEDLETNKKMAKIGNEVIKPNA----- 152 Caldanaerobacte...
WP_023908110  90 LEPALQRLHAARPTAVNLAWVLARM-RRTLSAa----HADWRQAMAREAESIAREDLTANRCMGAYGAALIPIGS----- 159 Xylella fastidiosa
WP_017272511  79 LDAVWDELHQTRPTAINLRWALDAM-RDHLRP-LP--EAGRADAAYQRATEIAEEDIELNRAIGANGLKVIRQIAakkkp 154 Sinorhizobium m...
WP_002808874  83 LEADLCDLEAARPTAINLAWALARM-QAIIQGlPD--HRDPESALLVEARCIHEEDIAANRRMGELGTTLIEGSV----- 154 Nitrosococcus o...
WP_011568571  79 MDAAWAFLEKTRPTAINLRWALDRC-RAALRP-LP--EADRAAAALTLAHEIADEDVEINRRIGEHGLALIREIAarkpa 154 Roseobacter den...
WP_011373585  79 LKEKALLIRESRPTAINLMWAVDKM-MELLSA-----SANLIEDARSFAIELNDAEALESQKIAEFGCEIIEEILkqkn- 151 Sulfurimonas de...
WP_010961219  87 VEDDIAVLARSRPTAVNLFWALERM-REAMAAi----EGDPVPALLAAARRIHEDDLAANLAMGELGAAILGGCK----- 156 Methylococcus c...
2YRF_A       176 ----RIMTICNAGSIATSRYGTALAPFYLAKQKDLGLHIYACETRPVLQGSRLTAWELMQGGIDVTLITDSMAAHTMKEK 251 Bacillus subtilis
Q885T7       159 --lqTVLTHCNTGALATGGFGTALGVIRAAHLEGMIERVYADETRPWLQGSRLTAWELANEGIPVTLNADSAAAHLMRTK 236 Pseudomonas syr...
WP_011320260 151 --klTLLTHCNAGALATAGYGTALGVVRSAWREGRLERLFADETRPRLQGAKLTTWECVQEGIPVTLITDNMAAHCMKQG 228 Anabaena variab...
WP_011025825 153 ----VILTHCNTGALATVGYGTALGVIREAHYSGKNIFVYADETRPRLQGAKLTAWELVQEGIPAKLIADSVAATLIRDG 228 Caldanaerobacte...
WP_023908110 160 ----GVLTHCNTGSLATAGFGTALGVIRAGIAQGRIARVFAGETRPWLQGARLTVWELQQDGIDVTLIADSAAAHLMKSG 235 Xylella fastidiosa
WP_017272511 155 gepvRILTHCNAGWLATVDYGTATAPIYMAVEEGIPVHVYVDETRPRNQGAYLTAWEMSSHGVPHTLIVDNAGGHLMQHG 234 Sinorhizobium m...
WP_002808874 155 ----GVLTHCNTGSLATGGFGTALGVIRHAYGKGRIEKVFADETRPWLQGARLTTWELLRDGIPVVLIADSVAPYLLGQG 230 Nitrosococcus o...
WP_011568571 155 gepvRLLTHCNAGWLATVDWGTATSPMYHAQDAGIPLHVWVDETRPRNQGA-LTAWELGKHGVPHTYITDNAGGHLMQHG 233 Roseobacter den...
WP_011373585 152 ktriNILTHCNAGWLAVIDEGTALAPIYEAKRRGIDVHVWVDETRPRNQGASLTAWELSKEGIEHTIIADNMGGLLMQRG 231 Sulfurimonas de...
WP_010961219 157 ----GVLTHCNTGALATGGYGTALGVIRSTWRRGALERVYATETRPWSQGARLTVWELGQDRIPATLLADSAAAWLMKSG 232 Methylococcus c...
2YRF_A       252 QISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLSTFDTKVKCG-ADIPIEERDPEEVRQIS-------- 322 Bacillus subtilis
Q885T7       237 GITWVIVGADRITANGDVANKIGTYQLAVAAMHHGVRFMVVAPSSTIDMEMASG-DDIIIEERDGRELLEVG-------- 307 Pseudomonas syr...
WP_011320260 229 LIDAVVVGADRIAANGDAANKIGTYSLAIVAKAHNVPFFVAAPVSTIDFELTDG-SQIPIEERNPVEIYQVG-------- 299 Anabaena variab...
WP_011025825 229 KIDIILVGADRIALNGDTANKIGTFMLSVVAKVYNVPFYVVAPTSTIDFNIETG-AEIVIEERSPEEVTHIN-------- 299 Caldanaerobacte...
WP_023908110 236 QVQWVIVGADRICANGDTANKIGTYQLAITARHHGVKFMVVASAATVDMDTAAG-EAIEIEQRDPEELLGVS-------- 306 Xylella fastidiosa
WP_017272511 235 DVDLVIVGTDRTTANGDVCNKIGTYLKALAARDNGVPFYVALPSPTIDWTVHDGvKEIPIEERPGDEVSFVQ-------- 306 Sinorhizobium m...
WP_002808874 231 EVQWVIVGADRIAANGDTANKIGSYGLAVAARYHNVRFMVVAPTSTIDWNLSDG-TRIPIEQRPPEEVLTLG-------- 301 Nitrosococcus o...
WP_011568571 234 MVDMVITGTDRTTRRGDVCNKIGTYLKALAAHDNGVPFYVALPSPTIDWTVSDGvAEIPIEERDAQEVTHVQgltdgggl 313 Roseobacter den...
WP_011373585 232 EVDMVIVGADRVSANGDVANKIGTYLKALAAHDNGVPFYVAIPASTFDFEIKDGvKEIPIEERSGDEVKFIR-------- 303 Sulfurimonas de...
WP_010961219 233 AVQWVVVGADRIAANGDVANKIGTYSLAVLARHHGVKLMVVAPISTVDWATATG-EDIVVEERDPRELLHPL-------- 303 Methylococcus c...
2YRF_A       323 -G---------VRTAPsNVPVFNPAFDITPHDLISGIITEKGIMTG 358 Bacillus subtilis
Q885T7       308 -G---------QRVGA-DVEAFNPVFDVTPADLIDAIVTEKGIVER 342 Pseudomonas syringae pv. tomato str. DC3000
WP_011320260 300 -D---------TTLTPpGVEFYNPAFDVTPAELITAIITENGAFAP 335 Anabaena variabilis
WP_011025825 300 -G---------VRIAPeGIDVYNPAFDVTPHENITGIITEKGIIRP 335 Caldanaerobacter subterraneus
WP_023908110 307 -G---------VRTVAeGIAAWNPVFDVTPGALIDAIVTERGVIQs 342 Xylella fastidiosa
WP_017272511 307 -GrasdgsiasVRISPeGSPAANPAFDVTPARLITGLITERGIATP 351 Sinorhizobium meliloti
WP_002808874 302 -G---------KAIATvGAEAYNPAFDVIPAHLIDAIVTERGVVRQ 337 Nitrosococcus oceani
WP_011568571 314 gT---------VQVTPtGTQGGNPAFDVTPNRLVTGLITERGVCDA 350 Roseobacter denitrificans
WP_011373585 304 -GvdedgvlrrVRITPeDSPTKNYGFDVTPARLISALITNKGVCRA 348 Sulfurimonas denitrificans
WP_010961219 304 -----------FLGSDsVIGAWNPVFDVTPAALIDAIVTEAGVVTn 338 Methylococcus capsulatus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap