3NME,4KYQ,4PYH,4RKK


Conserved Protein Domain Family
DSP_laforin-like

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cd14526: DSP_laforin-like 
dual specificity phosphatase domain of laforin and similar domains
This family is composed of glucan phosphatases including vertebrate dual specificity protein phosphatase laforin, also called lafora PTPase (LAFPTPase), and plant starch excess4 (SEX4). Laforin is a glycogen phosphatase; its gene is mutated in Lafora progressive myoclonus epilepsy or Lafora disease (LD), a fatal autosomal recessive neurodegenerative disorder characterized by the presence of progressive neurological deterioration, myoclonus, and epilepsy. One characteristic of LD is the accumulation of insoluble glucans. Laforin prevents LD by at least two mechanisms: by preventing hyperphosphorylation of glycogen by dephosphorylating it, allowing proper glycogen formation, and by promoting the ubiquitination of proteins involved in glycogen metabolism via its interaction with malin. Laforin contains an N-terminal CBM20 (carbohydrate-binding module, family 20) domain and a C-terminal catalytic dual specificity phosphatase (DSP) domain. Plant SEX4 regulate starch metabolism by selectively dephosphorylating glucose moieties within starch glucan chains. It contains an N-terminal catalytic DSP domain and a C-terminal Early (E) set domain.
Statistics
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PSSM-Id: 350375
Aligned: 26 rows
Threshold Bit Score: 172.381
Created: 6-Oct-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitecatalytic site
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1: active site [active site], 10 residue positions
Conserved feature residue pattern:x x C x x x x x R xClick to see conserved feature residue pattern help
Evidence:
  • Structure:4RKK: Human laforin binds a phosphate and dephosphorylated glucan product; contacts at 4A
    View structure with Cn3D
  • Structure:4PYH: Arabidopsis thaliana phosphatase starch excess4 binds phosphoglucan; contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
3NME_A        11 XNYNFIRPDLIVGSClq-tpEDVDKLRKi--------GVKTIFCLQqdpdl----------eyfgvDISSIQAYAkkysD 71  thale cress
4RKK_A       158 MHYSRILPNIWLGSCpr-qvEHVTIKLKhe------lGITAVMNFQtewdivqnss-gcnrypepmTPDTMIKLYre-eG 228 human
CAG03589     137 MHFSRVLPRVWLGSCpr-kvEHVTIKMKye------lGITAVMNFQteadvinnsggctrsgaeatTPEVMMDLYke-sG 208 spotted green p...
NP_001026240 142 IHYSRILPNIWLGSCpr-qlEHVTVKLKhe------lGVTAVMNFQtewdivqnsw-gcnrypepmSPEVLMRLYke-eG 212 chicken
XP_001025376 469 LSFDSIFEYLYLGPYisnniSDIRQLKKf--------GIDTVLSLQtdddm----------qrrsvDIKLLKEQYkk-sG 529 Tetrahymena the...
XP_001027258 241 LSFDNITENLSIGSFin-saNDISSLHKl--------GVTAIVNLQtkrdm----------erkyvNAQEIRKICks-kG 300 Tetrahymena the...
XP_001434634 186 LNYNQILENLYVGSFly-skQNITQLVFseihilqklGVDAIVNLQttedlin-------kdlqegYFDQIRESCqs-yQ 256 Paramecium tetr...
XP_001444286 297 FQTYEINENILIGPYpq-neQDILYLKQk--------QVRAVLNLQtrldm----------fhrgvNWEQIVDAYkr-hN 356 Paramecium tetr...
NP_001085689 137 MHFSRILPNIWLGSCpr-qlEHVTVKMKhe------lGVTAVLNFQtewdviqnss-gcnrypepmSPETLFRLYke-vG 207 African clawed ...
XP_001624235 149 MHYCKIFENIWLGSCpr-lrSHIMDLKSq--------GITAVISLQtasdiqkhc--sgiyrynqnLPITLKKLYke-eG 216 starlet sea ane...
Feature 1                 ##                              #######                               #
3NME_A        72 IQHIRCEIRDFdafdlRXRLPAVVGTLYKavkrnggVTYVHSTAGXGRAPAVALTYXFWVqgykLXEAHKLLXSKRSc-F 150 thale cress
4RKK_A       229 LAYIWMPTPDMstegrVQMLPQAVCLLHAlle-kghIVYVHSNAGVGRSTAAVCGWLQYVmgwnLRKVQYFLMAKRPavY 307 human
CAG03589     209 LAYVWIPTPDMstegrIRMLPQAVFLLYGlle-nghTVYVHCNAGVGRSTAAVCGLLMYVlgwsMRKVQYFVAARRPavY 287 spotted green p...
NP_001026240 213 LAYVWMPTPDMstegrIQMLPQAVCLLHGllq-nghTVYVHCNAGVGRSTAAVSGWLKYVmgwsLRKVQYFLASRRPavY 291 chicken
XP_001025376 530 IEYYNIPIKDKsfqdfYHKGLSAVEKLNTllknqkrIVYLHCTGGISRAPQTAILYLSLYknysLKNAIKYVCSKREaaF 609 Tetrahymena the...
XP_001027258 301 ILFINTPIRDNdpvdyVQRAPEVLDIIEDlyk-anhHIYIHCTAGIGRAPQTAILHLVLHrnykINEASELIFSKRPvsS 379 Tetrahymena the...
XP_001434634 257 ITYSHFPIRDCnkrsfLQKGMQAYQILKKlie-egkCVYVHCTDGIQRSIQTVILYLVLDlnysLEDAITLVKTARKrsK 335 Paramecium tetr...
XP_001444286 357 IVMKNYQIFDMdsedfEKKSNKAVQILKKlin-eyeYVYVHCTAGIGRAPSIVVLYLASIlqydLKEAIEFVKQKRQqfY 435 Paramecium tetr...
NP_001085689 208 ITYIWIPTPDMstegrIRMLPQAVYLLFGlle-nghTVYVHCNAGVGRSTAAVCGFLMYVigwsLRKVQYFLASRRPavY 286 African clawed ...
XP_001624235 217 ISYIWLPMEDLstesrIENLPQGVYLLHGlln-nghRVYVHCNGGVGRSTAIVCGFLMYVlhwsLAKVQYNICSKRPvaF 295 starlet sea ane...
Feature 1                
3NME_A       151 PKLDAIRN 158 thale cress
4RKK_A       308 IDEEALAR 315 human
CAG03589     288 IDEEALIK 295 spotted green pufferfish
NP_001026240 292 IDEEALIR 299 chicken
XP_001025376 610 PDEQLMHL 617 Tetrahymena thermophila
XP_001027258 380 PNKEAIIS 387 Tetrahymena thermophila
XP_001434634 336 PIREVLQQ 343 Paramecium tetraurelia strain d4-2
XP_001444286 436 INYSMLKK 443 Paramecium tetraurelia strain d4-2
NP_001085689 287 IDEEAMIN 294 African clawed frog
XP_001624235 296 IDGRALIT 303 starlet sea anemone

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